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The map label for this gene is yhaO

Identifier: 30064454

GI number: 30064454

Start: 3239303

End: 3240634

Strand: Reverse

Name: yhaO

Synonym: S3361

Alternate gene names: 30064454

Gene position: 3240634-3239303 (Counterclockwise)

Preceding gene: 30064455

Following gene: 30064453

Centisome position: 70.46

GC content: 50.23

Gene sequence:

>1332_bases
ATGGAAATTGCATCGAATAAAGGCGTCATTGCAGACGCTTCGACCCCGGCGGGTCGTGCTGGAATGAGTGAGAGCGAGTG
GCGAGAAGCGATCAAATTCGACAGTACTGACACCGGCTGGGTGATTATGAGTATCGGGATGGCGATTGGCGCGGGGATTG
TTTTTCTCCCGGTGCAGGTCGGTTTGATGGGATTGTGGGTATTTTTGCTCTCATCGGTGATTGGTTACCCGGCAATGTAT
CTGTTTCAGCGGTTGTTTATTAATACGCTGGCAGAATCACCAGAATGTAAAGATTACCCGAGTGTCATTAGCGGTTATTT
AGGTAAAAACTGGGGCATCCTGTTAGGTGCGCTCTATTTCGTAATGCTGGTGATTTGGATGTTCGTCTATTCCACCGCCA
TCACCAACGATAGTGCTTCCTATCTGCATACCTTCGGCGTGACGGAAGGGTTGCTGTCAGACAGTCCCTTTTATGGTCTG
GTACTGATTTGCATTCTGGTGGCGATCTCTTCACGCGGCGAGAAATTGTTATTCAAAATTTCGACCGACATGGTGCTGAC
CAAGCTGCTGGTAGTCGCTGCGCTGGGCGTGTCGATGGTGGGAATGTGGCATCTGTATAACGTCGGTTCGCTACCGCCGC
TGGGGCTGCTGGTGAAAAACGCCATTATTACGCTGCCGTTTACCCTGACGTCGATTCTGTTTATCCAGACGTTAAGCCCG
ATGGTGATCTCTTATCGCTCGCGGGAAAAATCAATTGAAGTGGCGCGGCATAAAGCATTGCGGGCAATGAATATCGCGTT
TGGCATTTTGTTTGTCACCGTCTTTTTCTACGCCGTGTCGTTCACGCTGGCGATGGGACATGACGAAGCGGTAAAAGCCT
ACGAGCAGAATATTTCCGCGCTGGCGATTGCCGCACAGTTTATTAGCGGTGACGGCGCAGCGTGGGTGAAAGTGGTCAGC
GTCATTCTCAATATCTTTGCTGTCATGACTGCATTCTTTGGCGTCTATTTAGGCTTTCGCGAAGCAACGCAAGGGATCGT
AATGAACATCCTGCGTCGCAAGATGCCTGCCGAGAAGATTAACGAAAATCTTGTTCAGCGCGGCATCATGATTTTCGCCA
TTTTGCTGGCCTGGAGCGCCATCGTACTGAACGCACCGGTGTTGAGCTTCACCTCTATCTGTAGCCCGATTTTCGGCATG
GTAGGGTGCCTGATCCCGGCGTGGCTGGTTTACAAAGTACCGGCATTGCACAAATACAAAGGGATGTCTCTGTACCTGAT
TATCGTCACTGGTTTGTTGCTTTGTGTTTCTCTGTTCCTGGCATTTTCTTGA

Upstream 100 bases:

>100_bases
CTTTATTCTAATAACTCGCCTGCAAAAACGTAGACCGCATATCGCCTTGATGCGGCTCGGAAAAAAATAATAAGCCCTAC
AAAATATTGAGCGAGAAATT

Downstream 100 bases:

>100_bases
TTTACCTGAAATTTTAAGGTTTTTAATATGTTTGATTCGACTTTAAATCCGTTATGGCAGCGTTACATCCTCGCCGTTCA
GGAGGAAGTAAAACCGGCGC

Product: putative transport system permease protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 443; Mature: 443

Protein sequence:

>443_residues
MEIASNKGVIADASTPAGRAGMSESEWREAIKFDSTDTGWVIMSIGMAIGAGIVFLPVQVGLMGLWVFLLSSVIGYPAMY
LFQRLFINTLAESPECKDYPSVISGYLGKNWGILLGALYFVMLVIWMFVYSTAITNDSASYLHTFGVTEGLLSDSPFYGL
VLICILVAISSRGEKLLFKISTDMVLTKLLVVAALGVSMVGMWHLYNVGSLPPLGLLVKNAIITLPFTLTSILFIQTLSP
MVISYRSREKSIEVARHKALRAMNIAFGILFVTVFFYAVSFTLAMGHDEAVKAYEQNISALAIAAQFISGDGAAWVKVVS
VILNIFAVMTAFFGVYLGFREATQGIVMNILRRKMPAEKINENLVQRGIMIFAILLAWSAIVLNAPVLSFTSICSPIFGM
VGCLIPAWLVYKVPALHKYKGMSLYLIIVTGLLLCVSLFLAFS

Sequences:

>Translated_443_residues
MEIASNKGVIADASTPAGRAGMSESEWREAIKFDSTDTGWVIMSIGMAIGAGIVFLPVQVGLMGLWVFLLSSVIGYPAMY
LFQRLFINTLAESPECKDYPSVISGYLGKNWGILLGALYFVMLVIWMFVYSTAITNDSASYLHTFGVTEGLLSDSPFYGL
VLICILVAISSRGEKLLFKISTDMVLTKLLVVAALGVSMVGMWHLYNVGSLPPLGLLVKNAIITLPFTLTSILFIQTLSP
MVISYRSREKSIEVARHKALRAMNIAFGILFVTVFFYAVSFTLAMGHDEAVKAYEQNISALAIAAQFISGDGAAWVKVVS
VILNIFAVMTAFFGVYLGFREATQGIVMNILRRKMPAEKINENLVQRGIMIFAILLAWSAIVLNAPVLSFTSICSPIFGM
VGCLIPAWLVYKVPALHKYKGMSLYLIIVTGLLLCVSLFLAFS
>Mature_443_residues
MEIASNKGVIADASTPAGRAGMSESEWREAIKFDSTDTGWVIMSIGMAIGAGIVFLPVQVGLMGLWVFLLSSVIGYPAMY
LFQRLFINTLAESPECKDYPSVISGYLGKNWGILLGALYFVMLVIWMFVYSTAITNDSASYLHTFGVTEGLLSDSPFYGL
VLICILVAISSRGEKLLFKISTDMVLTKLLVVAALGVSMVGMWHLYNVGSLPPLGLLVKNAIITLPFTLTSILFIQTLSP
MVISYRSREKSIEVARHKALRAMNIAFGILFVTVFFYAVSFTLAMGHDEAVKAYEQNISALAIAAQFISGDGAAWVKVVS
VILNIFAVMTAFFGVYLGFREATQGIVMNILRRKMPAEKINENLVQRGIMIFAILLAWSAIVLNAPVLSFTSICSPIFGM
VGCLIPAWLVYKVPALHKYKGMSLYLIIVTGLLLCVSLFLAFS

Specific function: Unknown

COG id: COG0814

COG function: function code E; Amino acid permeases

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid/polyamine transporter 2 family. SdaC/TdcC subfamily [H]

Homologues:

Organism=Escherichia coli, GI145693183, Length=443, Percent_Identity=99.548532731377, Blast_Score=882, Evalue=0.0,
Organism=Escherichia coli, GI1789961, Length=408, Percent_Identity=44.6078431372549, Blast_Score=365, Evalue=1e-102,
Organism=Escherichia coli, GI1789160, Length=428, Percent_Identity=28.5046728971963, Blast_Score=136, Evalue=3e-33,
Organism=Escherichia coli, GI1789504, Length=436, Percent_Identity=25.6880733944954, Blast_Score=101, Evalue=1e-22,
Organism=Escherichia coli, GI1789211, Length=413, Percent_Identity=22.5181598062954, Blast_Score=94, Evalue=1e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004694 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48389; Mature: 48389

Theoretical pI: Translated: 8.83; Mature: 8.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIASNKGVIADASTPAGRAGMSESEWREAIKFDSTDTGWVIMSIGMAIGAGIVFLPVQV
CCCCCCCCEEEECCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHHH
GLMGLWVFLLSSVIGYPAMYLFQRLFINTLAESPECKDYPSVISGYLGKNWGILLGALYF
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHH
VMLVIWMFVYSTAITNDSASYLHTFGVTEGLLSDSPFYGLVLICILVAISSRGEKLLFKI
HHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEEE
STDMVLTKLLVVAALGVSMVGMWHLYNVGSLPPLGLLVKNAIITLPFTLTSILFIQTLSP
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MVISYRSREKSIEVARHKALRAMNIAFGILFVTVFFYAVSFTLAMGHDEAVKAYEQNISA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
LAIAAQFISGDGAAWVKVVSVILNIFAVMTAFFGVYLGFREATQGIVMNILRRKMPAEKI
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
NENLVQRGIMIFAILLAWSAIVLNAPVLSFTSICSPIFGMVGCLIPAWLVYKVPALHKYK
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHC
GMSLYLIIVTGLLLCVSLFLAFS
CCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MEIASNKGVIADASTPAGRAGMSESEWREAIKFDSTDTGWVIMSIGMAIGAGIVFLPVQV
CCCCCCCCEEEECCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHHH
GLMGLWVFLLSSVIGYPAMYLFQRLFINTLAESPECKDYPSVISGYLGKNWGILLGALYF
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHH
VMLVIWMFVYSTAITNDSASYLHTFGVTEGLLSDSPFYGLVLICILVAISSRGEKLLFKI
HHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEEE
STDMVLTKLLVVAALGVSMVGMWHLYNVGSLPPLGLLVKNAIITLPFTLTSILFIQTLSP
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MVISYRSREKSIEVARHKALRAMNIAFGILFVTVFFYAVSFTLAMGHDEAVKAYEQNISA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
LAIAAQFISGDGAAWVKVVSVILNIFAVMTAFFGVYLGFREATQGIVMNILRRKMPAEKI
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
NENLVQRGIMIFAILLAWSAIVLNAPVLSFTSICSPIFGMVGCLIPAWLVYKVPALHKYK
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHC
GMSLYLIIVTGLLLCVSLFLAFS
CCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]