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The map label for this gene is yhaN

Identifier: 30064453

GI number: 30064453

Start: 3238466

End: 3239275

Strand: Reverse

Name: yhaN

Synonym: S3360

Alternate gene names: 30064453

Gene position: 3239275-3238466 (Counterclockwise)

Preceding gene: 30064454

Following gene: 30064452

Centisome position: 70.43

GC content: 56.54

Gene sequence:

>810_bases
ATGTTTGATTCGACTTTAAATCCGTTATGGCAGCGTTACATCCTCGCCGTTCAGGAGGAAGTAAAACCGGCGCTGGGATG
TACTGAACCGATTTCACTGGCGCTGGCGGCGGCGGTTGCTGCGGCAGAACTGGAAGGTCCGGTTGAACGTGTAGAAGCCT
GGGTTTCGCCAAATCTGATGAAGAACGGTCTGGGCGTCACCGTTCCCGGCACGGGAATGGTGGGGCTGCCGATTGCGGCG
GCGCTGGGGGCGTTAGGTGGAAATGCCAACGCCGGGCTGGAAGTGCTGAAAGACGCAACTGCGCAGGCAATTGCCGATGC
CAAAGCACTGCTGGCGGCGGGGAAAGTCTCTGTTAAGATCCAGGAACCTTGCAATGAAATCCTCTTCTCACGCGCCAAAG
TCTGGAACGGTGAGAAGTGGGCGTGTGTCACCATCGTCGGCGGGCATACCAACATTGTGCATATTGAGACGCACAATGGT
GTGGTGTTTACCCACCAGGCGTGTGTGGCAGAGGGCGAGCAAGAGTCGCCGCTGACGGTGCTTTCCAGAACGACGCTGGC
TGAGATCCTGAAGTTCGTCAATGAAGTCCCATTTGCGGCGATCCGCTTTATTCTCGATTCCGCGAAGCTAAATTGTGCGT
TATCGCAGGAAGGTTTGAGCGGTAAGTGGGGGCTTGCATATTGGCGCGACGCTGGAAAAACAGTGCGAGCGCGGTTTGCT
GGCGAAAGATCTCTCTTCATCCATTGTGATTCGTACCAGCGCGGCATCCGATGCGCGTATGGGCGGCGCTACGCTTCCGG
CTATGAGTAA

Upstream 100 bases:

>100_bases
AGGGATGTCTCTGTACCTGATTATCGTCACTGGTTTGTTGCTTTGTGTTTCTCTGTTCCTGGCATTTTCTTGATTTACCT
GAAATTTTAAGGTTTTTAAT

Downstream 100 bases:

>100_bases
CTCCGGCTCGGGTAACCAGGGGATCACTGCAATAATGCCTGTGGTGGTTGTAGCAGAACACTTCGGAGCGGATGATGAAC
GACTGGCGCGTGCGCTGATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 269; Mature: 269

Protein sequence:

>269_residues
MFDSTLNPLWQRYILAVQEEVKPALGCTEPISLALAAAVAAAELEGPVERVEAWVSPNLMKNGLGVTVPGTGMVGLPIAA
ALGALGGNANAGLEVLKDATAQAIADAKALLAAGKVSVKIQEPCNEILFSRAKVWNGEKWACVTIVGGHTNIVHIETHNG
VVFTHQACVAEGEQESPLTVLSRTTLAEILKFVNEVPFAAIRFILDSAKLNCALSQEGLSGKWGLAYWRDAGKTVRARFA
GERSLFIHCDSYQRGIRCAYGRRYASGYE

Sequences:

>Translated_269_residues
MFDSTLNPLWQRYILAVQEEVKPALGCTEPISLALAAAVAAAELEGPVERVEAWVSPNLMKNGLGVTVPGTGMVGLPIAA
ALGALGGNANAGLEVLKDATAQAIADAKALLAAGKVSVKIQEPCNEILFSRAKVWNGEKWACVTIVGGHTNIVHIETHNG
VVFTHQACVAEGEQESPLTVLSRTTLAEILKFVNEVPFAAIRFILDSAKLNCALSQEGLSGKWGLAYWRDAGKTVRARFA
GERSLFIHCDSYQRGIRCAYGRRYASGYE
>Mature_269_residues
MFDSTLNPLWQRYILAVQEEVKPALGCTEPISLALAAAVAAAELEGPVERVEAWVSPNLMKNGLGVTVPGTGMVGLPIAA
ALGALGGNANAGLEVLKDATAQAIADAKALLAAGKVSVKIQEPCNEILFSRAKVWNGEKWACVTIVGGHTNIVHIETHNG
VVFTHQACVAEGEQESPLTVLSRTTLAEILKFVNEVPFAAIRFILDSAKLNCALSQEGLSGKWGLAYWRDAGKTVRARFA
GERSLFIHCDSYQRGIRCAYGRRYASGYE

Specific function: Unknown

COG id: COG3681

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Integral membrane protein (Potential) [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0597 family [H]

Homologues:

Organism=Escherichia coli, GI48994923, Length=225, Percent_Identity=98.6666666666667, Blast_Score=453, Evalue=1e-129,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005130
- InterPro:   IPR021144 [H]

Pfam domain/function: PF03313 SDH_alpha [H]

EC number: NA

Molecular weight: Translated: 28750; Mature: 28750

Theoretical pI: Translated: 7.00; Mature: 7.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFDSTLNPLWQRYILAVQEEVKPALGCTEPISLALAAAVAAAELEGPVERVEAWVSPNLM
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHH
KNGLGVTVPGTGMVGLPIAAALGALGGNANAGLEVLKDATAQAIADAKALLAAGKVSVKI
HCCCEEEECCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEE
QEPCNEILFSRAKVWNGEKWACVTIVGGHTNIVHIETHNGVVFTHQACVAEGEQESPLTV
HHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEEEEECCCEEEEEHHHHHCCCCCCCHHH
LSRTTLAEILKFVNEVPFAAIRFILDSAKLNCALSQEGLSGKWGLAYWRDAGKTVRARFA
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHCEEEECCCCCCCCCCHHEEHHCCCEEEEHCC
GERSLFIHCDSYQRGIRCAYGRRYASGYE
CCCEEEEEECCCCCCCCHHHCCCCCCCCC
>Mature Secondary Structure
MFDSTLNPLWQRYILAVQEEVKPALGCTEPISLALAAAVAAAELEGPVERVEAWVSPNLM
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHH
KNGLGVTVPGTGMVGLPIAAALGALGGNANAGLEVLKDATAQAIADAKALLAAGKVSVKI
HCCCEEEECCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEE
QEPCNEILFSRAKVWNGEKWACVTIVGGHTNIVHIETHNGVVFTHQACVAEGEQESPLTV
HHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEEEEECCCEEEEEHHHHHCCCCCCCHHH
LSRTTLAEILKFVNEVPFAAIRFILDSAKLNCALSQEGLSGKWGLAYWRDAGKTVRARFA
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHCEEEECCCCCCCCCCHHEEHHCCCEEEEHCC
GERSLFIHCDSYQRGIRCAYGRRYASGYE
CCCEEEEEECCCCCCCCHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA