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The map label for this gene is yhaM

Identifier: 30064452

GI number: 30064452

Start: 3237964

End: 3238530

Strand: Reverse

Name: yhaM

Synonym: S3359

Alternate gene names: 30064452

Gene position: 3238530-3237964 (Counterclockwise)

Preceding gene: 30064453

Following gene: 30064449

Centisome position: 70.41

GC content: 56.08

Gene sequence:

>567_bases
GTGATTCGTACCAGCGCGGCATCCGATGCGCGTATGGGCGGCGCTACGCTTCCGGCTATGAGTAACTCCGGCTCGGGTAA
CCAGGGGATCACTGCAATAATGCCTGTGGTGGTTGTAGCAGAACACTTCGGAGCGGATGATGAACGACTGGCGCGTGCGC
TGATGCTTTCTCATTTGAGCGCAATTTACATCCATAACCAGTTACCGCGTTTGTCTGCACTTTGTGCCGCAACGACCGCA
GCAATGGGGGCCGCCGCCGGGATGGCATGGCTGGTGGATGGGCGTTATGAAACTATCTCGATGGCGATCAGCAGTATGAT
CGGCGATGTCAGCGGCATGATTTGCGATGGTGCGTCGAACAGCTGCGCGATGAAGGTTTCGACCAGTGCTTCGGCTGCGT
GGAAAGCGGTGTTAATGGCGCTGGATGATACCGCCGTGACCGGCAATGAAGGGATCGTGGCGCATGATGTTGAGCAGTCG
ATTGCCAACCTGTGTGCGTTAGCAAGCCATTCGATGCAGCAAACGGATCGGCAGATTATCGAGATTATGGCGAGCAAGGC
CAGATAA

Upstream 100 bases:

>100_bases
CAGGAAGGTTTGAGCGGTAAGTGGGGGCTTGCATATTGGCGCGACGCTGGAAAAACAGTGCGAGCGCGGTTTGCTGGCGA
AAGATCTCTCTTCATCCATT

Downstream 100 bases:

>100_bases
ACGCCAGGTTTTGAGTATTGTGCCGGATGCGATGCTGGCGCACCTTATCCGGCCTACGGGGTGCTCAACTTGTTGATGTT
GTTGTGTTTTGTACCTGATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 188; Mature: 188

Protein sequence:

>188_residues
MIRTSAASDARMGGATLPAMSNSGSGNQGITAIMPVVVVAEHFGADDERLARALMLSHLSAIYIHNQLPRLSALCAATTA
AMGAAAGMAWLVDGRYETISMAISSMIGDVSGMICDGASNSCAMKVSTSASAAWKAVLMALDDTAVTGNEGIVAHDVEQS
IANLCALASHSMQQTDRQIIEIMASKAR

Sequences:

>Translated_188_residues
MIRTSAASDARMGGATLPAMSNSGSGNQGITAIMPVVVVAEHFGADDERLARALMLSHLSAIYIHNQLPRLSALCAATTA
AMGAAAGMAWLVDGRYETISMAISSMIGDVSGMICDGASNSCAMKVSTSASAAWKAVLMALDDTAVTGNEGIVAHDVEQS
IANLCALASHSMQQTDRQIIEIMASKAR
>Mature_188_residues
MIRTSAASDARMGGATLPAMSNSGSGNQGITAIMPVVVVAEHFGADDERLARALMLSHLSAIYIHNQLPRLSALCAATTA
AMGAAAGMAWLVDGRYETISMAISSMIGDVSGMICDGASNSCAMKVSTSASAAWKAVLMALDDTAVTGNEGIVAHDVEQS
IANLCALASHSMQQTDRQIIEIMASKAR

Specific function: Unknown

COG id: COG3681

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Integral membrane protein (Potential) [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0597 family [H]

Homologues:

Organism=Escherichia coli, GI48994923, Length=188, Percent_Identity=98.936170212766, Blast_Score=373, Evalue=1e-105,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005130
- InterPro:   IPR021144 [H]

Pfam domain/function: PF03313 SDH_alpha [H]

EC number: NA

Molecular weight: Translated: 19375; Mature: 19375

Theoretical pI: Translated: 5.51; Mature: 5.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
7.4 %Met     (Translated Protein)
9.6 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
7.4 %Met     (Mature Protein)
9.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRTSAASDARMGGATLPAMSNSGSGNQGITAIMPVVVVAEHFGADDERLARALMLSHLS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
AIYIHNQLPRLSALCAATTAAMGAAAGMAWLVDGRYETISMAISSMIGDVSGMICDGASN
HHHHHHCCHHHHHHHHHHHHHHHHHHCHHEEECCCHHHHHHHHHHHHHHHHCEEECCCCC
SCAMKVSTSASAAWKAVLMALDDTAVTGNEGIVAHDVEQSIANLCALASHSMQQTDRQII
CEEEEECCCHHHHHHHHHHHHCCCEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHH
EIMASKAR
HHHHHCCC
>Mature Secondary Structure
MIRTSAASDARMGGATLPAMSNSGSGNQGITAIMPVVVVAEHFGADDERLARALMLSHLS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
AIYIHNQLPRLSALCAATTAAMGAAAGMAWLVDGRYETISMAISSMIGDVSGMICDGASN
HHHHHHCCHHHHHHHHHHHHHHHHHHCHHEEECCCHHHHHHHHHHHHHHHHCEEECCCCC
SCAMKVSTSASAAWKAVLMALDDTAVTGNEGIVAHDVEQSIANLCALASHSMQQTDRQII
CEEEEECCCHHHHHHHHHHHHCCCEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHH
EIMASKAR
HHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA