| Definition | Shigella flexneri 2a str. 2457T, complete genome. |
|---|---|
| Accession | NC_004741 |
| Length | 4,599,354 |
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The map label for this gene is sap
Identifier: 30064306
GI number: 30064306
Start: 3077100
End: 3077972
Strand: Direct
Name: sap
Synonym: S3193
Alternate gene names: 30064306
Gene position: 3077100-3077972 (Clockwise)
Preceding gene: 30064305
Following gene: 30064307
Centisome position: 66.9
GC content: 57.96
Gene sequence:
>873_bases ATGAATCCGTCTGATGCCATTGAGGCAATTGAAAAACCGCTCTCCTCCCTGCCTTACTCACTTTCCCGTCACATCCTGGA ACATCTGCGCAAACTCACCAGTCACGAACCCGTGATTGGCATTATGGGTAAAAGCGGGGCCGGTAAATCTTCACTCTGTA ATGCACTGTTTCAGGGGGAGGTCACACCGGTCAGTGATGTTCACGCCGGCACCCGGGAAGTGCAGCGCTTCCGTCTGAGT GGTCACGGTCACAGCATGGTTATCACTGACCTGCCCGGGGTGGGCGAGAGCCGGGACAGGGATGCAGAGTATGAAGCCCT GTACCGTGACATTCTGCCTGAACTGGACCTGGTGCTGTGGCTGATTAAAGCCGATGACCGGGCCCTGTCTGTGGATGAGT ATTTCTGGCGACACATCCTGCAGTGCGGACATCAGCAGGTGCTGTTTGTGGTGACGCAGGCTGACAAAACGGAACCCTGC CATGAATGGGATATGGCAGGTATTCAGCCTTCTCCCGCACAGGAACAGAACATTCGTGAGAAAACGGAGGCGGTATTCCG TCTGTTCCGGCCCGTACATCCGGTTGTTGCCGTATCGGCCCGCACCGGCTGGGAACTGGATACGCTGGTCAGTGCGCTCA TGACAGCGCTTCCCGACCATGCCGCCAGCCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAGTCTGTCCGCTCT CAGGCCCGTGAACAGTTTACCGGTGCGGTGGACCGGATATTTGACACAGCGGAGAGCGTCTGTGTTGCCTCTGTTGTCCG TACGGCCCTGCGCGCTGTTCGTGACACCGTGGTCTCTGTTGCCCGCGCGGTATGGAACTGGATCTTCTTCTGA
Upstream 100 bases:
>100_bases TGTTACATTCTAAATAATCTCAGACAGATATTATCTCCGTGAATCCCCCGCCACCTTTCCGGTGCGCGGGGTTTTGTCTT TTTTCACCGGGAATACATGT
Downstream 100 bases:
>100_bases ACCTGTTGTGGATGATGTCCTCCCTGCCTCTGAGTCTGCTCACAAAAGCGCTGTTTTCGTTACTGTCTCTCTTGTCCGTG CAATAGACTGATAATAGAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 290; Mature: 290
Protein sequence:
>290_residues MNPSDAIEAIEKPLSSLPYSLSRHILEHLRKLTSHEPVIGIMGKSGAGKSSLCNALFQGEVTPVSDVHAGTREVQRFRLS GHGHSMVITDLPGVGESRDRDAEYEALYRDILPELDLVLWLIKADDRALSVDEYFWRHILQCGHQQVLFVVTQADKTEPC HEWDMAGIQPSPAQEQNIREKTEAVFRLFRPVHPVVAVSARTGWELDTLVSALMTALPDHAASPLMTRLQDELRTESVRS QAREQFTGAVDRIFDTAESVCVASVVRTALRAVRDTVVSVARAVWNWIFF
Sequences:
>Translated_290_residues MNPSDAIEAIEKPLSSLPYSLSRHILEHLRKLTSHEPVIGIMGKSGAGKSSLCNALFQGEVTPVSDVHAGTREVQRFRLS GHGHSMVITDLPGVGESRDRDAEYEALYRDILPELDLVLWLIKADDRALSVDEYFWRHILQCGHQQVLFVVTQADKTEPC HEWDMAGIQPSPAQEQNIREKTEAVFRLFRPVHPVVAVSARTGWELDTLVSALMTALPDHAASPLMTRLQDELRTESVRS QAREQFTGAVDRIFDTAESVCVASVVRTALRAVRDTVVSVARAVWNWIFF >Mature_290_residues MNPSDAIEAIEKPLSSLPYSLSRHILEHLRKLTSHEPVIGIMGKSGAGKSSLCNALFQGEVTPVSDVHAGTREVQRFRLS GHGHSMVITDLPGVGESRDRDAEYEALYRDILPELDLVLWLIKADDRALSVDEYFWRHILQCGHQQVLFVVTQADKTEPC HEWDMAGIQPSPAQEQNIREKTEAVFRLFRPVHPVVAVSARTGWELDTLVSALMTALPDHAASPLMTRLQDELRTESVRS QAREQFTGAVDRIFDTAESVCVASVVRTALRAVRDTVVSVARAVWNWIFF
Specific function: Unknown
COG id: COG3596
COG function: function code R; Predicted GTPase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli yfjP and ykfA [H]
Homologues:
Organism=Escherichia coli, GI87081706, Length=291, Percent_Identity=49.4845360824742, Blast_Score=277, Evalue=5e-76, Organism=Escherichia coli, GI48994902, Length=291, Percent_Identity=50.1718213058419, Blast_Score=276, Evalue=8e-76,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32447; Mature: 32447
Theoretical pI: Translated: 5.95; Mature: 5.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPSDAIEAIEKPLSSLPYSLSRHILEHLRKLTSHEPVIGIMGKSGAGKSSLCNALFQGE CCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHCC VTPVSDVHAGTREVQRFRLSGHGHSMVITDLPGVGESRDRDAEYEALYRDILPELDLVLW CCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH LIKADDRALSVDEYFWRHILQCGHQQVLFVVTQADKTEPCHEWDMAGIQPSPAQEQNIRE HHCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHCCCCCCCCCCHHHHHHH KTEAVFRLFRPVHPVVAVSARTGWELDTLVSALMTALPDHAASPLMTRLQDELRTESVRS HHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH QAREQFTGAVDRIFDTAESVCVASVVRTALRAVRDTVVSVARAVWNWIFF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNPSDAIEAIEKPLSSLPYSLSRHILEHLRKLTSHEPVIGIMGKSGAGKSSLCNALFQGE CCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHCC VTPVSDVHAGTREVQRFRLSGHGHSMVITDLPGVGESRDRDAEYEALYRDILPELDLVLW CCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH LIKADDRALSVDEYFWRHILQCGHQQVLFVVTQADKTEPCHEWDMAGIQPSPAQEQNIRE HHCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHCCCCCCCCCCHHHHHHH KTEAVFRLFRPVHPVVAVSARTGWELDTLVSALMTALPDHAASPLMTRLQDELRTESVRS HHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH QAREQFTGAVDRIFDTAESVCVASVVRTALRAVRDTVVSVARAVWNWIFF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503 [H]