| Definition | Shigella flexneri 2a str. 2457T, complete genome. |
|---|---|
| Accession | NC_004741 |
| Length | 4,599,354 |
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The map label for this gene is 30064305
Identifier: 30064305
GI number: 30064305
Start: 3075971
End: 3076990
Strand: Direct
Name: 30064305
Synonym: S4826
Alternate gene names: NA
Gene position: 3075971-3076990 (Clockwise)
Preceding gene: 30064303
Following gene: 30064306
Centisome position: 66.88
GC content: 37.45
Gene sequence:
>1020_bases ATGAATAACGAACAGATGCTTATCAAATGCAGAGATCCCCGTAAATGTCGGTTTTATGCCGAATATCTGAATCACAAATA CCCTAATGAATTCCCTCACTTTGCGCCTGACAACCCACAAAATTGTATCAGGAATGTTAATTTATTTTTAAAGGAAAAGT ATTGTAATGTTTCACCTCCCCCCTTTGGTACTTTTGGTACTACTGAAGAAGAAGCACTCAATAACGAAATTAATGAGCTT GAAATTATTGCCGGGCAGGCAATACTGCCTGAAGAGAGTTTTCTCTGGTTGAAAACTGACGAACTTGCGACTTTCTTTAC CTGGACTACTATTTATCTGTCGAAGGAAGACCATACAAAATTCCCGAAAATAAACCATAATTCATCAGGAATAAAAAACG GAATTGAAGTCAGGAAAATACGAACAGTTACCGATGAAACGTTAAATACTTACAAAAAAAGTAACCTTCCGGATAATCCA TCATCCCATAACGAACGAATAAAAGTAATCATTTCATATTTTGACTCCTGCCATTCTTTAATTAATAAAAATGCAAAAAG CATATACCTCGAGGAACTCAGGCAGGCGTGGCTTAAAAAGAAAAGCGCTTGTCAAAAGTTTAAGTGGCTCCTTCCTGACG ATGATGAAATGTGTCAGTGGTTCTGGACAAGACTGAAACAAAAACAGGATGAAAAACATCCAGTACATAACCCAGTGACC CGGTGGTTCATACCATCTTCAACGAAAGAATATTATCTTGCCTCTCTTGTCGCCTTTGCTTTATGGAAAGAAGCGCCTGA TACCATTGAACTGTTCAGAACACGAATAAATCATGCCTGGCATCAGAAAAAACAAAAGGACAAATATCGGAGTGATGGTA AAAAGGCCATTAATATACATATAAGAAGCAATGTGAAAGAAATGCTTGATGAGCTCAGAACTGTTTACGGTCTGAGAACA GGAGAGTTTTTTGAAATGCTGATTACAGAGAAATATCTTGAACACAAGCGAAGGAAGTAA
Upstream 100 bases:
>100_bases AAAACATAAATAAACAGCAACAAAAACATTTGATAATCACTTAGTGATTAAATACAATTAAGACGATTTTGTTATAAGAG AGGCACCATGGAGTGAGATA
Downstream 100 bases:
>100_bases TTCATTACCTGTTACATTCTAAATAATCTCAGACAGATATTATCTCCGTGAATCCCCCGCCACCTTTCCGGTGCGCGGGG TTTTGTCTTTTTTCACCGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 339; Mature: 339
Protein sequence:
>339_residues MNNEQMLIKCRDPRKCRFYAEYLNHKYPNEFPHFAPDNPQNCIRNVNLFLKEKYCNVSPPPFGTFGTTEEEALNNEINEL EIIAGQAILPEESFLWLKTDELATFFTWTTIYLSKEDHTKFPKINHNSSGIKNGIEVRKIRTVTDETLNTYKKSNLPDNP SSHNERIKVIISYFDSCHSLINKNAKSIYLEELRQAWLKKKSACQKFKWLLPDDDEMCQWFWTRLKQKQDEKHPVHNPVT RWFIPSSTKEYYLASLVAFALWKEAPDTIELFRTRINHAWHQKKQKDKYRSDGKKAINIHIRSNVKEMLDELRTVYGLRT GEFFEMLITEKYLEHKRRK
Sequences:
>Translated_339_residues MNNEQMLIKCRDPRKCRFYAEYLNHKYPNEFPHFAPDNPQNCIRNVNLFLKEKYCNVSPPPFGTFGTTEEEALNNEINEL EIIAGQAILPEESFLWLKTDELATFFTWTTIYLSKEDHTKFPKINHNSSGIKNGIEVRKIRTVTDETLNTYKKSNLPDNP SSHNERIKVIISYFDSCHSLINKNAKSIYLEELRQAWLKKKSACQKFKWLLPDDDEMCQWFWTRLKQKQDEKHPVHNPVT RWFIPSSTKEYYLASLVAFALWKEAPDTIELFRTRINHAWHQKKQKDKYRSDGKKAINIHIRSNVKEMLDELRTVYGLRT GEFFEMLITEKYLEHKRRK >Mature_339_residues MNNEQMLIKCRDPRKCRFYAEYLNHKYPNEFPHFAPDNPQNCIRNVNLFLKEKYCNVSPPPFGTFGTTEEEALNNEINEL EIIAGQAILPEESFLWLKTDELATFFTWTTIYLSKEDHTKFPKINHNSSGIKNGIEVRKIRTVTDETLNTYKKSNLPDNP SSHNERIKVIISYFDSCHSLINKNAKSIYLEELRQAWLKKKSACQKFKWLLPDDDEMCQWFWTRLKQKQDEKHPVHNPVT RWFIPSSTKEYYLASLVAFALWKEAPDTIELFRTRINHAWHQKKQKDKYRSDGKKAINIHIRSNVKEMLDELRTVYGLRT GEFFEMLITEKYLEHKRRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40388; Mature: 40388
Theoretical pI: Translated: 9.21; Mature: 9.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNEQMLIKCRDPRKCRFYAEYLNHKYPNEFPHFAPDNPQNCIRNVNLFLKEKYCNVSPP CCCCCEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCC PFGTFGTTEEEALNNEINELEIIAGQAILPEESFLWLKTDELATFFTWTTIYLSKEDHTK CCCCCCCCHHHHHHCCCHHEEEEECCEECCCCCEEEEECCCHHHHEEEEEEEEECCCCCC FPKINHNSSGIKNGIEVRKIRTVTDETLNTYKKSNLPDNPSSHNERIKVIISYFDSCHSL CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH INKNAKSIYLEELRQAWLKKKSACQKFKWLLPDDDEMCQWFWTRLKQKQDEKHPVHNPVT HCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCC RWFIPSSTKEYYLASLVAFALWKEAPDTIELFRTRINHAWHQKKQKDKYRSDGKKAINIH EEECCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEE IRSNVKEMLDELRTVYGLRTGEFFEMLITEKYLEHKRRK EHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNNEQMLIKCRDPRKCRFYAEYLNHKYPNEFPHFAPDNPQNCIRNVNLFLKEKYCNVSPP CCCCCEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCC PFGTFGTTEEEALNNEINELEIIAGQAILPEESFLWLKTDELATFFTWTTIYLSKEDHTK CCCCCCCCHHHHHHCCCHHEEEEECCEECCCCCEEEEECCCHHHHEEEEEEEEECCCCCC FPKINHNSSGIKNGIEVRKIRTVTDETLNTYKKSNLPDNPSSHNERIKVIISYFDSCHSL CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH INKNAKSIYLEELRQAWLKKKSACQKFKWLLPDDDEMCQWFWTRLKQKQDEKHPVHNPVT HCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCC RWFIPSSTKEYYLASLVAFALWKEAPDTIELFRTRINHAWHQKKQKDKYRSDGKKAINIH EEECCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEE IRSNVKEMLDELRTVYGLRTGEFFEMLITEKYLEHKRRK EHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA