Definition | Shigella flexneri 2a str. 2457T, complete genome. |
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Accession | NC_004741 |
Length | 4,599,354 |
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The map label for this gene is 30064191
Identifier: 30064191
GI number: 30064191
Start: 2947016
End: 2947762
Strand: Reverse
Name: 30064191
Synonym: S3062
Alternate gene names: NA
Gene position: 2947762-2947016 (Counterclockwise)
Preceding gene: 30064192
Following gene: 30064190
Centisome position: 64.09
GC content: 50.2
Gene sequence:
>747_bases ATGTCCCAACAAGAAATCAGCATCATTAACCTCGACCAGCTTGTGTCCATGACCTCAGTTGAAATTGCTGAGCTGACAGG AAAAGAACATAAACACGTTTTACGAGATATTCGTAATATGGTCGAAGAGCTTAACGGGGCCAAAACTGAGCACTGCTCAA CTTTGAGCAGCGAGCTTAACGGGTCCAAATTTGGGCTCGTTGGCGAGGAAGTATACAAGGACGCGAAAGGTGAGAGCCGA ACAATGTATCGTCTCGACCGTAAGCATACTTTCATTCTGGTCGCTGGCTATTCCGTTCACCTCCGCGCCAAGTGTTACGA CCATATTCAGACGTTAGAGCGTCGAGTCCTTCAACTGGAAGACCAGAAGAAGCGAGCAGCCATTCAGTCCGCTAACCGCC GAGGCGTGACTTGGGGCGACTACTGCAAAACCTATGGTCTGCCCGCTCAGAAGCTAATGACCGCACTTCTCCAGCATCGT GGCCTCTTTCGTAAGAACCCAATCAGTAACGAGTGGTCTGTAAATCCGAAGTATTCCGACTGCTTTCGTATCATTAAGCC GTCAGACCAGAAGTTCTCAGCAGGTGGGTATAACTTCCGGTTCAACGCTAAGGGGCTGGAGGTCTTCGGTAAGCCTGAGA TGGTTGACAAGATGCGAGGCATCCTTATTGCATTCACTGGCACCGACCAGCAGAAGCAAGAGCACCTCCTGAAGCTGGCA CAATCCGGTAAGGTGGAGGGAATCTAA
Upstream 100 bases:
>100_bases TCTGTTTGCGTCCTGTTGCCTGCTGGTCTCCCTTTACGTGGGGGCTTGAGTAGGTCAGTGGGGTGCGACTTCAGGGTGCA AACAAAAGGAGTACACGTAA
Downstream 100 bases:
>100_bases GATGATGATTGACCCGCGCACACCTGAGGGGCGCATGACTCTCCGTTACCGTGGCTACCGGACTGAAGTCCTCCTCAGAG AGCTTGGTCTAGACCCGGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 248; Mature: 247
Protein sequence:
>248_residues MSQQEISIINLDQLVSMTSVEIAELTGKEHKHVLRDIRNMVEELNGAKTEHCSTLSSELNGSKFGLVGEEVYKDAKGESR TMYRLDRKHTFILVAGYSVHLRAKCYDHIQTLERRVLQLEDQKKRAAIQSANRRGVTWGDYCKTYGLPAQKLMTALLQHR GLFRKNPISNEWSVNPKYSDCFRIIKPSDQKFSAGGYNFRFNAKGLEVFGKPEMVDKMRGILIAFTGTDQQKQEHLLKLA QSGKVEGI
Sequences:
>Translated_248_residues MSQQEISIINLDQLVSMTSVEIAELTGKEHKHVLRDIRNMVEELNGAKTEHCSTLSSELNGSKFGLVGEEVYKDAKGESR TMYRLDRKHTFILVAGYSVHLRAKCYDHIQTLERRVLQLEDQKKRAAIQSANRRGVTWGDYCKTYGLPAQKLMTALLQHR GLFRKNPISNEWSVNPKYSDCFRIIKPSDQKFSAGGYNFRFNAKGLEVFGKPEMVDKMRGILIAFTGTDQQKQEHLLKLA QSGKVEGI >Mature_247_residues SQQEISIINLDQLVSMTSVEIAELTGKEHKHVLRDIRNMVEELNGAKTEHCSTLSSELNGSKFGLVGEEVYKDAKGESRT MYRLDRKHTFILVAGYSVHLRAKCYDHIQTLERRVLQLEDQKKRAAIQSANRRGVTWGDYCKTYGLPAQKLMTALLQHRG LFRKNPISNEWSVNPKYSDCFRIIKPSDQKFSAGGYNFRFNAKGLEVFGKPEMVDKMRGILIAFTGTDQQKQEHLLKLAQ SGKVEGI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28239; Mature: 28108
Theoretical pI: Translated: 9.75; Mature: 9.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQQEISIINLDQLVSMTSVEIAELTGKEHKHVLRDIRNMVEELNGAKTEHCSTLSSELN CCCCCEEEECHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCC GSKFGLVGEEVYKDAKGESRTMYRLDRKHTFILVAGYSVHLRAKCYDHIQTLERRVLQLE CCCCCCCHHHHHHCCCCCCCHHEEECCCEEEEEEECCEEEEHHHHHHHHHHHHHHHHHHH DQKKRAAIQSANRRGVTWGDYCKTYGLPAQKLMTALLQHRGLFRKNPISNEWSVNPKYSD HHHHHHHHHHCCCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHH CFRIIKPSDQKFSAGGYNFRFNAKGLEVFGKPEMVDKMRGILIAFTGTDQQKQEHLLKLA HHHHCCCCCCCCCCCCEEEEECCCCCEECCCCHHHHHHCCEEEEEECCCHHHHHHHHHHH QSGKVEGI HCCCCCCC >Mature Secondary Structure SQQEISIINLDQLVSMTSVEIAELTGKEHKHVLRDIRNMVEELNGAKTEHCSTLSSELN CCCCEEEECHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCC GSKFGLVGEEVYKDAKGESRTMYRLDRKHTFILVAGYSVHLRAKCYDHIQTLERRVLQLE CCCCCCCHHHHHHCCCCCCCHHEEECCCEEEEEEECCEEEEHHHHHHHHHHHHHHHHHHH DQKKRAAIQSANRRGVTWGDYCKTYGLPAQKLMTALLQHRGLFRKNPISNEWSVNPKYSD HHHHHHHHHHCCCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHH CFRIIKPSDQKFSAGGYNFRFNAKGLEVFGKPEMVDKMRGILIAFTGTDQQKQEHLLKLA HHHHCCCCCCCCCCCCEEEEECCCCCEECCCCHHHHHHCCEEEEEECCCHHHHHHHHHHH QSGKVEGI HCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA