Definition | Shigella flexneri 2a str. 2457T, complete genome. |
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Accession | NC_004741 |
Length | 4,599,354 |
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The map label for this gene is 30064192
Identifier: 30064192
GI number: 30064192
Start: 2948881
End: 2949213
Strand: Reverse
Name: 30064192
Synonym: S3063
Alternate gene names: NA
Gene position: 2949213-2948881 (Counterclockwise)
Preceding gene: 30064193
Following gene: 30064191
Centisome position: 64.12
GC content: 41.44
Gene sequence:
>333_bases ATGGCTTCGGAAGATTGGCAACGTGAGCATCATTGCCGCACAGGTATAATATTTACTGCTTTTGCTATTGAGGCAATGTT CATCTTCTATAGAAAACAGGTTGACCCCGGCTACGATAAGACGCAGAAAGAGTGCAGAAAGACAATGCACAAGAATACGT TAAAATTGTGCGGTATAAACAATTATATGGGGACAAAACCTTACCAAATTATCAAAGAGTGTCTTGAGGTAAGAGACGCT ATTGCTCACGGCGATTCGTATACTTCGAGCTTTAATTTCTCGGCGGATCATTTGGATAACCAAGACGATATTGCAAAAGT GTCCTGGCGGTAA
Upstream 100 bases:
>100_bases ATGTGAGGACGTAATGGTCAAAGAATTTTTAGTTAGCAAAGAAAATAAGCCTTCATATGAATGTATGAATACTGCTGAAA CTTGTTTGGGGCTGGCTGGA
Downstream 100 bases:
>100_bases ACTCTGAACAATTTCGGGGATTAACTGTTGAGCGCCTTGCAAAATACATTGAAATGGCAAAGCATATTGACCATGAGATT TCTGATAATGGTTACAGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 110; Mature: 109
Protein sequence:
>110_residues MASEDWQREHHCRTGIIFTAFAIEAMFIFYRKQVDPGYDKTQKECRKTMHKNTLKLCGINNYMGTKPYQIIKECLEVRDA IAHGDSYTSSFNFSADHLDNQDDIAKVSWR
Sequences:
>Translated_110_residues MASEDWQREHHCRTGIIFTAFAIEAMFIFYRKQVDPGYDKTQKECRKTMHKNTLKLCGINNYMGTKPYQIIKECLEVRDA IAHGDSYTSSFNFSADHLDNQDDIAKVSWR >Mature_109_residues ASEDWQREHHCRTGIIFTAFAIEAMFIFYRKQVDPGYDKTQKECRKTMHKNTLKLCGINNYMGTKPYQIIKECLEVRDAI AHGDSYTSSFNFSADHLDNQDDIAKVSWR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12872; Mature: 12740
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 7.3 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASEDWQREHHCRTGIIFTAFAIEAMFIFYRKQVDPGYDKTQKECRKTMHKNTLKLCGIN CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHCCCC NYMGTKPYQIIKECLEVRDAIAHGDSYTSSFNFSADHLDNQDDIAKVSWR CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCEECCCC >Mature Secondary Structure ASEDWQREHHCRTGIIFTAFAIEAMFIFYRKQVDPGYDKTQKECRKTMHKNTLKLCGIN CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHCCCC NYMGTKPYQIIKECLEVRDAIAHGDSYTSSFNFSADHLDNQDDIAKVSWR CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA