| Definition | Shigella flexneri 2a str. 2457T, complete genome. |
|---|---|
| Accession | NC_004741 |
| Length | 4,599,354 |
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The map label for this gene is yeeZ [H]
Identifier: 30063465
GI number: 30063465
Start: 2076788
End: 2077612
Strand: Reverse
Name: yeeZ [H]
Synonym: S2198
Alternate gene names: 30063465
Gene position: 2077612-2076788 (Counterclockwise)
Preceding gene: 30063466
Following gene: 30063464
Centisome position: 45.17
GC content: 51.15
Gene sequence:
>825_bases ATGAAAAAGGTCGCAATTGTCGGGTTAGGGTGGTTAGGTATGCCGCTGGCGATGTCACTTTCAGCGCGAGGCTGGCAAGT CACCGGGAGTAAAACCACACAAGATGGTGTCGAAGCGGCCCGAATGAGTGGCATTGATAGCTATCTGCTTCGCATGGAGC CTGAGTTAGTTTGCGATTCTGACGATCTGGATGCCCTTATGGATGCCGATGCGCTGGTCATTACGCTTCCGGCACGTCGT AGCGGCCCCGGCGATGAGTTCTATTTACAAGCGGTACAAGAGTTAGTGGATAGCGCGCTGGCCCATCGTATTCCCCGAAT TATTTTTACCAGCTCAACATCTGTCTATGGCGACGCGCAAGGCACGGTTAAAGAAACTACCCCGCGTAATCCGGTAACCA ACAGTGGACGAGTATTAGAAGAACTCGAAGACTGGCTGCACAATTTACCCGGTACTTCGGTCGATATTCTGCGTCTTGCG GGCCTGGTCGGACCGGGACGTCATCCGGGACGCTTCTTTGCCGGAAAAACCGCCCCTGATGGTGAACATGGTGTTAATTT AGTCCATTTAGAAGATGTTATTGGCGCTATCACTCTGTTGTTACAGGCACCTAAAGGCGGACACATCTATAATATATGTG CGCCAGCTCACCCTGCGCGTAATGTTTTCTATCCGCAGATGGCCCGTTTACTGGGGCTGCAACCTCCGCAGTTCAGAAAT AGTCTGGACAGCGGCAAAGGTAAGATTATTGATGGCAGTCGGATTTGTAATGAACTGGGATTTGAATACCAGTATCCCGA TCCGCTGGTAATGCCGTTGGAGTAA
Upstream 100 bases:
>100_bases TGTCGTTATCATTATTGAACAGATTCATTCATAGAATGAATTGTCAGTTTTGATACGCTAGCGTAGCCTTATAGATCTAA GGTGTATCAGGAGATAACGG
Downstream 100 bases:
>100_bases ACGATCACGCCAGCAGGACGCCGCATGCACTGCAAGGGGGCGTGTATGAAACCACTGCTGGATGTGTTGATGATCCTCGA TGCCATAGAAAAAGAGGGCA
Product: putative enzyme of sugar metabolism
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 274; Mature: 274
Protein sequence:
>274_residues MKKVAIVGLGWLGMPLAMSLSARGWQVTGSKTTQDGVEAARMSGIDSYLLRMEPELVCDSDDLDALMDADALVITLPARR SGPGDEFYLQAVQELVDSALAHRIPRIIFTSSTSVYGDAQGTVKETTPRNPVTNSGRVLEELEDWLHNLPGTSVDILRLA GLVGPGRHPGRFFAGKTAPDGEHGVNLVHLEDVIGAITLLLQAPKGGHIYNICAPAHPARNVFYPQMARLLGLQPPQFRN SLDSGKGKIIDGSRICNELGFEYQYPDPLVMPLE
Sequences:
>Translated_274_residues MKKVAIVGLGWLGMPLAMSLSARGWQVTGSKTTQDGVEAARMSGIDSYLLRMEPELVCDSDDLDALMDADALVITLPARR SGPGDEFYLQAVQELVDSALAHRIPRIIFTSSTSVYGDAQGTVKETTPRNPVTNSGRVLEELEDWLHNLPGTSVDILRLA GLVGPGRHPGRFFAGKTAPDGEHGVNLVHLEDVIGAITLLLQAPKGGHIYNICAPAHPARNVFYPQMARLLGLQPPQFRN SLDSGKGKIIDGSRICNELGFEYQYPDPLVMPLE >Mature_274_residues MKKVAIVGLGWLGMPLAMSLSARGWQVTGSKTTQDGVEAARMSGIDSYLLRMEPELVCDSDDLDALMDADALVITLPARR SGPGDEFYLQAVQELVDSALAHRIPRIIFTSSTSVYGDAQGTVKETTPRNPVTNSGRVLEELEDWLHNLPGTSVDILRLA GLVGPGRHPGRFFAGKTAPDGEHGVNLVHLEDVIGAITLLLQAPKGGHIYNICAPAHPARNVFYPQMARLLGLQPPQFRN SLDSGKGKIIDGSRICNELGFEYQYPDPLVMPLE
Specific function: Unknown
COG id: COG0451
COG function: function code MG; Nucleoside-diphosphate-sugar epimerases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788327, Length=274, Percent_Identity=99.6350364963504, Blast_Score=560, Evalue=1e-161,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001509 - InterPro: IPR016040 [H]
Pfam domain/function: PF01370 Epimerase [H]
EC number: NA
Molecular weight: Translated: 29679; Mature: 29679
Theoretical pI: Translated: 5.33; Mature: 5.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKVAIVGLGWLGMPLAMSLSARGWQVTGSKTTQDGVEAARMSGIDSYLLRMEPELVCDS CCEEEEEECCHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHCHHHHHHHCCCCEEECC DDLDALMDADALVITLPARRSGPGDEFYLQAVQELVDSALAHRIPRIIFTSSTSVYGDAQ CCHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEECCCCEECCCC GTVKETTPRNPVTNSGRVLEELEDWLHNLPGTSVDILRLAGLVGPGRHPGRFFAGKTAPD CCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCEECCCCCCC GEHGVNLVHLEDVIGAITLLLQAPKGGHIYNICAPAHPARNVFYPQMARLLGLQPPQFRN CCCCEEEEEHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCHHHHHHHHHCCCCHHHHH SLDSGKGKIIDGSRICNELGFEYQYPDPLVMPLE HHCCCCCEEECHHHHHHHHCCCEECCCCEEECCC >Mature Secondary Structure MKKVAIVGLGWLGMPLAMSLSARGWQVTGSKTTQDGVEAARMSGIDSYLLRMEPELVCDS CCEEEEEECCHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHCHHHHHHHCCCCEEECC DDLDALMDADALVITLPARRSGPGDEFYLQAVQELVDSALAHRIPRIIFTSSTSVYGDAQ CCHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEECCCCEECCCC GTVKETTPRNPVTNSGRVLEELEDWLHNLPGTSVDILRLAGLVGPGRHPGRFFAGKTAPD CCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCEECCCCCCC GEHGVNLVHLEDVIGAITLLLQAPKGGHIYNICAPAHPARNVFYPQMARLLGLQPPQFRN CCCCEEEEEHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCHHHHHHHHHCCCCHHHHH SLDSGKGKIIDGSRICNELGFEYQYPDPLVMPLE HHCCCCCEEECHHHHHHHHCCCEECCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]