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The map label for this gene is yeeY

Identifier: 30063464

GI number: 30063464

Start: 2075759

End: 2076742

Strand: Reverse

Name: yeeY

Synonym: S2197

Alternate gene names: 30063464

Gene position: 2076742-2075759 (Counterclockwise)

Preceding gene: 30063465

Following gene: 30063463

Centisome position: 45.15

GC content: 49.9

Gene sequence:

>984_bases
ATGAAACCACTGCTGGATGTGTTGATGATCCTCGATGCCATAGAAAAAGAGGGCAGTTTTGCGGCGGCGTCAGCCAAACT
CTACAAGACGCCGTCCGCTCTGAGTTACACCGTTCACAAGCTGGAAAGCGACCTAAATATTCAATTGCTTGATCGTAGCG
GACACCGCGCTAAATTCACCCGCACCGGAAAAATGTTATTAGAGAAAGGGCGGGAAGTTCTGCATACCGTGCGAGAACTG
GAAAAGCAGGCGATCAAACTGCATGAAGGCTGGGAAAACGAGCTGGTGATTGGCGTGGACGACACGTTTCCTTTTTCTCT
GCTTGCGCCTCTCATTGAAGCTTTTTATCAACATCATAGCGTGACGCGCCTGAAGTTTATCAATGGCGTACTCGGTGGTT
CCTGGGATGCCCTGACTCAGGGGCGAGCGGATATTATCGTTGGCGCGATGCATGAGCCACCATCTTCCAGTGAGTTTGGT
TTCTCGCGGTTGGGCGATCTTGAACAAGTCTTTGCGGTCGCGCCTCATCATCCGTTAGCCCAGGAAGAAGAACCGTTAAA
CCGTCGTATCATTAAACGATATCGGGCGATTGTGGTGGGGGATACTGCGCAGGCAGGCGCTTCTACGGCCTCACAACTTC
TCGACGAACAAGAAGCCATTACCGTTTTCGATTTTAAAACCAAACTGGAGCTGCAAATTAGCGGCCTTGGCTGCGGCTAT
TTACCACGGTATCTGGCGCAACGTTTTCTCGATAGTGGCGCGTTAATCGAGAAGAAAGTGGTCGCCCAAACTCTCTTTGA
ACCTGTCTGGATTGGCTGGAATGAACAGACCGCAGGGCTTGCCAGCGGCTGGTGGCGAGATGAAATTTTAGCAAATAGTG
CGATCGCCGGTGTTTATGCAAAATCTGATGACGGAAAATCAGCCATTCAAAGAAAAATTATTATGACAAGCCTCTCATTC
TCTTGTCATTTCCCCCCCATTTAG

Upstream 100 bases:

>100_bases
TGAACTGGGATTTGAATACCAGTATCCCGATCCGCTGGTAATGCCGTTGGAGTAAACGATCACGCCAGCAGGACGCCGCA
TGCACTGCAAGGGGGCGTGT

Downstream 100 bases:

>100_bases
GCACAATGCGCCGCTGTCAAAAAATGATTAAAAACCGACGTTTAATTAGCGTCGGTTATTTTTTGCTTCAAACCAATCAT
TCATACCAAGAGGCCGGGCT

Product: putative LYSR-type transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 327; Mature: 327

Protein sequence:

>327_residues
MKPLLDVLMILDAIEKEGSFAAASAKLYKTPSALSYTVHKLESDLNIQLLDRSGHRAKFTRTGKMLLEKGREVLHTVREL
EKQAIKLHEGWENELVIGVDDTFPFSLLAPLIEAFYQHHSVTRLKFINGVLGGSWDALTQGRADIIVGAMHEPPSSSEFG
FSRLGDLEQVFAVAPHHPLAQEEEPLNRRIIKRYRAIVVGDTAQAGASTASQLLDEQEAITVFDFKTKLELQISGLGCGY
LPRYLAQRFLDSGALIEKKVVAQTLFEPVWIGWNEQTAGLASGWWRDEILANSAIAGVYAKSDDGKSAIQRKIIMTSLSF
SCHFPPI

Sequences:

>Translated_327_residues
MKPLLDVLMILDAIEKEGSFAAASAKLYKTPSALSYTVHKLESDLNIQLLDRSGHRAKFTRTGKMLLEKGREVLHTVREL
EKQAIKLHEGWENELVIGVDDTFPFSLLAPLIEAFYQHHSVTRLKFINGVLGGSWDALTQGRADIIVGAMHEPPSSSEFG
FSRLGDLEQVFAVAPHHPLAQEEEPLNRRIIKRYRAIVVGDTAQAGASTASQLLDEQEAITVFDFKTKLELQISGLGCGY
LPRYLAQRFLDSGALIEKKVVAQTLFEPVWIGWNEQTAGLASGWWRDEILANSAIAGVYAKSDDGKSAIQRKIIMTSLSF
SCHFPPI
>Mature_327_residues
MKPLLDVLMILDAIEKEGSFAAASAKLYKTPSALSYTVHKLESDLNIQLLDRSGHRAKFTRTGKMLLEKGREVLHTVREL
EKQAIKLHEGWENELVIGVDDTFPFSLLAPLIEAFYQHHSVTRLKFINGVLGGSWDALTQGRADIIVGAMHEPPSSSEFG
FSRLGDLEQVFAVAPHHPLAQEEEPLNRRIIKRYRAIVVGDTAQAGASTASQLLDEQEAITVFDFKTKLELQISGLGCGY
LPRYLAQRFLDSGALIEKKVVAQTLFEPVWIGWNEQTAGLASGWWRDEILANSAIAGVYAKSDDGKSAIQRKIIMTSLSF
SCHFPPI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082024, Length=309, Percent_Identity=99.3527508090615, Blast_Score=628, Evalue=0.0,
Organism=Escherichia coli, GI1789492, Length=286, Percent_Identity=39.1608391608392, Blast_Score=196, Evalue=2e-51,
Organism=Escherichia coli, GI1787949, Length=249, Percent_Identity=30.9236947791165, Blast_Score=148, Evalue=4e-37,
Organism=Escherichia coli, GI1786508, Length=293, Percent_Identity=25.938566552901, Blast_Score=130, Evalue=1e-31,
Organism=Escherichia coli, GI1786713, Length=277, Percent_Identity=24.9097472924188, Blast_Score=116, Evalue=3e-27,
Organism=Escherichia coli, GI1790262, Length=274, Percent_Identity=27.7372262773723, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1787601, Length=167, Percent_Identity=26.3473053892216, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI87082132, Length=271, Percent_Identity=25.830258302583, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 36272; Mature: 36272

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPLLDVLMILDAIEKEGSFAAASAKLYKTPSALSYTVHKLESDLNIQLLDRSGHRAKFT
CCHHHHHHHHHHHHHCCCCEEHHHHHHHCCCCHHHHHHHHHCCCCEEEEECCCCCEEEHH
RTGKMLLEKGREVLHTVRELEKQAIKLHEGWENELVIGVDDTFPFSLLAPLIEAFYQHHS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCC
VTRLKFINGVLGGSWDALTQGRADIIVGAMHEPPSSSEFGFSRLGDLEQVFAVAPHHPLA
HHHHHHHHHHCCCCHHHHHCCCCEEEEEECCCCCCCCCCCHHHHCCHHHHHHHCCCCCCC
QEEEPLNRRIIKRYRAIVVGDTAQAGASTASQLLDEQEAITVFDFKTKLELQISGLGCGY
CCCCHHHHHHHHHHHEEEECCCCHHHHHHHHHHHCCCCCEEEEEEEEEEEEEEECCCCCH
LPRYLAQRFLDSGALIEKKVVAQTLFEPVWIGWNEQTAGLASGWWRDEILANSAIAGVYA
HHHHHHHHHHCCCCHHHHHHHHHHHHHHEEECCCCCCCCCCCCCHHHHHHHCCHHHEEEE
KSDDGKSAIQRKIIMTSLSFSCHFPPI
CCCCCHHHHHHHHHHHHCCCEECCCCC
>Mature Secondary Structure
MKPLLDVLMILDAIEKEGSFAAASAKLYKTPSALSYTVHKLESDLNIQLLDRSGHRAKFT
CCHHHHHHHHHHHHHCCCCEEHHHHHHHCCCCHHHHHHHHHCCCCEEEEECCCCCEEEHH
RTGKMLLEKGREVLHTVRELEKQAIKLHEGWENELVIGVDDTFPFSLLAPLIEAFYQHHS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCC
VTRLKFINGVLGGSWDALTQGRADIIVGAMHEPPSSSEFGFSRLGDLEQVFAVAPHHPLA
HHHHHHHHHHCCCCHHHHHCCCCEEEEEECCCCCCCCCCCHHHHCCHHHHHHHCCCCCCC
QEEEPLNRRIIKRYRAIVVGDTAQAGASTASQLLDEQEAITVFDFKTKLELQISGLGCGY
CCCCHHHHHHHHHHHEEEECCCCHHHHHHHHHHHCCCCCEEEEEEEEEEEEEEECCCCCH
LPRYLAQRFLDSGALIEKKVVAQTLFEPVWIGWNEQTAGLASGWWRDEILANSAIAGVYA
HHHHHHHHHHCCCCHHHHHHHHHHHHHHEEECCCCCCCCCCCCCHHHHHHHCCHHHEEEE
KSDDGKSAIQRKIIMTSLSFSCHFPPI
CCCCCHHHHHHHHHHHHCCCEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]