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The map label for this gene is 30062240

Identifier: 30062240

GI number: 30062240

Start: 727951

End: 728979

Strand: Direct

Name: 30062240

Synonym: S0743

Alternate gene names: NA

Gene position: 727951-728979 (Clockwise)

Preceding gene: 30062239

Following gene: 30062241

Centisome position: 15.83

GC content: 53.94

Gene sequence:

>1029_bases
ATGGGATTGTTTACGACCCGCCAGTTACTCGGTTATACCGAACAAAAAGTTAAATTTCGTGCGCTGTTTCTGGAGCTGTT
TTTCCGCCGTACGGTGAATTTCCATACCGAAGAGGTAATGCTGGACAAAATTACCGGAAAAACGCCGGTGGCGGCCTATG
TCTCCCCGGTTGTTGAAGGAAAGGTGTTGCGTCACCGTGGCGGTGAAACTCGTGTACTGCGCCCGGGCTACGTTAAGCCG
AAACACGAATTTAATTACCAGCAGGCGGTGGAGCGTCTTCCCGGTGAAGATCCGGCCCAGCTGAACGGCCCGGCTTACCG
TCGCCTGCGTATCATCACCGATAACCTCAAACAGGAAGAGCACGCCATTGTCCAGGTGGAAGAGATGCAGGCGGTGAATG
CCGTGCTGTATGGCAAATACACCATGGAAGGAGAGCAGTTTGAAACTGTTGAGGTCGATTTTGGCCGGTCGGTGGGAAAT
AACATTACGCAGGCAGGAGGGACGGAGTGGAGCGCTCAGGACCGCGATACCTTTGATCCGACGCATGATCTGGATGCGTA
CTGTGATTTTGCTTCCGGCACCATCAATATTGCCATTATGGATGGTAAGGTCTGGCGTCTGCTGAATGGCTTTAAGCTGT
TCCGCGAAAAACTGGATACCCGTCGTGGCTCAAATTCACAGCTGGAAACGGCAGTGAAAGACCTGGGGGCGGTGGTGTCC
TTCAAAGGGTATTATGGTGATCTGGCAATCGTGGTGGCAAAAACGTCCTATGTGGCAGAGGACGGTACCGAAAAACGTTA
TCTGCCGGACGGCACACTGGTACTGGGAAATACGGCCGCAGAGGGTATTCGTTGCTACGGTGCCATTCAGGATGCGCAGG
CATTGTCTGAAGGCGTGGTGGCGTCTTCCCGTTATCCGAAACACTGGCTGACCGTGGGTGATCCGGCGCGTGAATTCACC
ATGACGCAGTCCGCGCCGCTGATGGTGCTGCCGGATCCGGATGAGTTTGTGGTGGTGCAGGTGAAATAA

Upstream 100 bases:

>100_bases
TGCCTTTGCCGGCAGTGCCCTGAGTCACGCAGCGCTGCCGTAACATTTTATCAGGTCACTGCGGTAGCCTGACTGATTTC
TGAATGAAAGGAACTGATTT

Downstream 100 bases:

>100_bases
TCCGTGAGCGGGAGCTAAATGCTCCCGTTTTTCATTCAATCAGGAGCGGGTATGGCTACGAAAGAAGAAAACCTGAAACG
TCTTTGTGAGCTGGCTGAGA

Product: major capsid protein

Products: NA

Alternate protein names: Head protein gp7 [H]

Number of amino acids: Translated: 342; Mature: 341

Protein sequence:

>342_residues
MGLFTTRQLLGYTEQKVKFRALFLELFFRRTVNFHTEEVMLDKITGKTPVAAYVSPVVEGKVLRHRGGETRVLRPGYVKP
KHEFNYQQAVERLPGEDPAQLNGPAYRRLRIITDNLKQEEHAIVQVEEMQAVNAVLYGKYTMEGEQFETVEVDFGRSVGN
NITQAGGTEWSAQDRDTFDPTHDLDAYCDFASGTINIAIMDGKVWRLLNGFKLFREKLDTRRGSNSQLETAVKDLGAVVS
FKGYYGDLAIVVAKTSYVAEDGTEKRYLPDGTLVLGNTAAEGIRCYGAIQDAQALSEGVVASSRYPKHWLTVGDPAREFT
MTQSAPLMVLPDPDEFVVVQVK

Sequences:

>Translated_342_residues
MGLFTTRQLLGYTEQKVKFRALFLELFFRRTVNFHTEEVMLDKITGKTPVAAYVSPVVEGKVLRHRGGETRVLRPGYVKP
KHEFNYQQAVERLPGEDPAQLNGPAYRRLRIITDNLKQEEHAIVQVEEMQAVNAVLYGKYTMEGEQFETVEVDFGRSVGN
NITQAGGTEWSAQDRDTFDPTHDLDAYCDFASGTINIAIMDGKVWRLLNGFKLFREKLDTRRGSNSQLETAVKDLGAVVS
FKGYYGDLAIVVAKTSYVAEDGTEKRYLPDGTLVLGNTAAEGIRCYGAIQDAQALSEGVVASSRYPKHWLTVGDPAREFT
MTQSAPLMVLPDPDEFVVVQVK
>Mature_341_residues
GLFTTRQLLGYTEQKVKFRALFLELFFRRTVNFHTEEVMLDKITGKTPVAAYVSPVVEGKVLRHRGGETRVLRPGYVKPK
HEFNYQQAVERLPGEDPAQLNGPAYRRLRIITDNLKQEEHAIVQVEEMQAVNAVLYGKYTMEGEQFETVEVDFGRSVGNN
ITQAGGTEWSAQDRDTFDPTHDLDAYCDFASGTINIAIMDGKVWRLLNGFKLFREKLDTRRGSNSQLETAVKDLGAVVSF
KGYYGDLAIVVAKTSYVAEDGTEKRYLPDGTLVLGNTAAEGIRCYGAIQDAQALSEGVVASSRYPKHWLTVGDPAREFTM
TQSAPLMVLPDPDEFVVVQVK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lambda phage gpE family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005564 [H]

Pfam domain/function: PF03864 Phage_cap_E [H]

EC number: NA

Molecular weight: Translated: 38274; Mature: 38143

Theoretical pI: Translated: 5.73; Mature: 5.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLFTTRQLLGYTEQKVKFRALFLELFFRRTVNFHTEEVMLDKITGKTPVAAYVSPVVEG
CCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHCC
KVLRHRGGETRVLRPGYVKPKHEFNYQQAVERLPGEDPAQLNGPAYRRLRIITDNLKQEE
HHHCCCCCCCEEECCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCHHEEEEEEHHCCCCCH
HAIVQVEEMQAVNAVLYGKYTMEGEQFETVEVDFGRSVGNNITQAGGTEWSAQDRDTFDP
HHEEEHHHHHHHCEEEEEEEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCCCCCCCC
THDLDAYCDFASGTINIAIMDGKVWRLLNGFKLFREKLDTRRGSNSQLETAVKDLGAVVS
CCCCHHHEECCCCEEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHEEE
FKGYYGDLAIVVAKTSYVAEDGTEKRYLPDGTLVLGNTAAEGIRCYGAIQDAQALSEGVV
ECCCCCCEEEEEEECEEECCCCCCCCCCCCCCEEECCCCCCCEEEEHHHHHHHHHHHCCC
ASSRYPKHWLTVGDPAREFTMTQSAPLMVLPDPDEFVVVQVK
CCCCCCCCEEECCCCHHHEEECCCCCEEEECCCCCEEEEEEC
>Mature Secondary Structure 
GLFTTRQLLGYTEQKVKFRALFLELFFRRTVNFHTEEVMLDKITGKTPVAAYVSPVVEG
CCCHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHCC
KVLRHRGGETRVLRPGYVKPKHEFNYQQAVERLPGEDPAQLNGPAYRRLRIITDNLKQEE
HHHCCCCCCCEEECCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCHHEEEEEEHHCCCCCH
HAIVQVEEMQAVNAVLYGKYTMEGEQFETVEVDFGRSVGNNITQAGGTEWSAQDRDTFDP
HHEEEHHHHHHHCEEEEEEEEECCCCEEEEEEECCCCCCCCCHHCCCCCCCCCCCCCCCC
THDLDAYCDFASGTINIAIMDGKVWRLLNGFKLFREKLDTRRGSNSQLETAVKDLGAVVS
CCCCHHHEECCCCEEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHEEE
FKGYYGDLAIVVAKTSYVAEDGTEKRYLPDGTLVLGNTAAEGIRCYGAIQDAQALSEGVV
ECCCCCCEEEEEEECEEECCCCCCCCCCCCCCEEECCCCCCCEEEEHHHHHHHHHHHCCC
ASSRYPKHWLTVGDPAREFTMTQSAPLMVLPDPDEFVVVQVK
CCCCCCCCEEECCCCHHHEEECCCCCEEEECCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]