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The map label for this gene is 30062239

Identifier: 30062239

GI number: 30062239

Start: 727546

End: 727893

Strand: Direct

Name: 30062239

Synonym: S0742

Alternate gene names: NA

Gene position: 727546-727893 (Clockwise)

Preceding gene: 30062238

Following gene: 30062240

Centisome position: 15.82

GC content: 57.18

Gene sequence:

>348_bases
ATGGTAACGAAAACCATCACTGAACAGCGTGCGGAAGTACGTATTTTTGCCGGTAATGATCCGGCCCATACCGCCACAGG
CTGCAGCGGGATTTCCTCGGCAACACCGGCTCTGACGCCCCTGATGCTGGATGAGGATACCGGGAAACTGGTGGTCTGGG
ACGGACAGAAGGCAGGCCATGTGGTTGGCATACTGGTACTGCCGCTTGAAGGTACAGAGACGGTGCTGACGTATTACAAG
TCGGGGACCTTTGCGACGGAGGCCATCCACTGGCCTGAGAGAGTGGATACACACAAAAAGGCGAATGCCTTTGCCGGCAG
TGCCCTGAGTCACGCAGCGCTGCCGTAA

Upstream 100 bases:

>100_bases
TGGCGTGCCACAGACGTCAGCAGACGGTGATGCGGACGTGAAAATGCTCATGGCCATGCCATGAAGTCAGTGCTGACCAT
CAATATGAGGTTTTTACAAT

Downstream 100 bases:

>100_bases
CATTTTATCAGGTCACTGCGGTAGCCTGACTGATTTCTGAATGAAAGGAACTGATTTATGGGATTGTTTACGACCCGCCA
GTTACTCGGTTATACCGAAC

Product: capsid protein small subunit

Products: NA

Alternate protein names: Head Decoration Protein Bacteriophage Origin; Gifsy-1 Prophage Head Protein Gpshp; Phage Head Decoration Protein; Head-DNA Stabilization X; Bacteriophage Lambda Head Decoration Protein D

Number of amino acids: Translated: 115; Mature: 115

Protein sequence:

>115_residues
MVTKTITEQRAEVRIFAGNDPAHTATGCSGISSATPALTPLMLDEDTGKLVVWDGQKAGHVVGILVLPLEGTETVLTYYK
SGTFATEAIHWPERVDTHKKANAFAGSALSHAALP

Sequences:

>Translated_115_residues
MVTKTITEQRAEVRIFAGNDPAHTATGCSGISSATPALTPLMLDEDTGKLVVWDGQKAGHVVGILVLPLEGTETVLTYYK
SGTFATEAIHWPERVDTHKKANAFAGSALSHAALP
>Mature_115_residues
MVTKTITEQRAEVRIFAGNDPAHTATGCSGISSATPALTPLMLDEDTGKLVVWDGQKAGHVVGILVLPLEGTETVLTYYK
SGTFATEAIHWPERVDTHKKANAFAGSALSHAALP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12158; Mature: 12158

Theoretical pI: Translated: 6.34; Mature: 6.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVTKTITEQRAEVRIFAGNDPAHTATGCSGISSATPALTPLMLDEDTGKLVVWDGQKAGH
CCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCCE
VVGILVLPLEGTETVLTYYKSGTFATEAIHWPERVDTHKKANAFAGSALSHAALP
EEEEEEECCCCCCEEEEEECCCCEEEEEECCCHHHCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MVTKTITEQRAEVRIFAGNDPAHTATGCSGISSATPALTPLMLDEDTGKLVVWDGQKAGH
CCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCCE
VVGILVLPLEGTETVLTYYKSGTFATEAIHWPERVDTHKKANAFAGSALSHAALP
EEEEEEECCCCCCEEEEEECCCCEEEEEECCCHHHCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA