Definition | Shigella flexneri 2a str. 2457T, complete genome. |
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Accession | NC_004741 |
Length | 4,599,354 |
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The map label for this gene is 30062241
Identifier: 30062241
GI number: 30062241
Start: 729031
End: 729417
Strand: Direct
Name: 30062241
Synonym: S0744
Alternate gene names: NA
Gene position: 729031-729417 (Clockwise)
Preceding gene: 30062240
Following gene: 30062242
Centisome position: 15.85
GC content: 55.04
Gene sequence:
>387_bases ATGGCTACGAAAGAAGAAAACCTGAAACGTCTTTGTGAGCTGGCTGAGAGGCTGGGGCGTGAACCGGATGTCTCCGGTAG TGCGGCAGATATTGCGCAGCGAGTGGCGGAACTGGAGGAAGAGCTTGGAGATGCGGGGGAGGTCGCAGAGCCGGATACGT ACTCACCATCGAAAGATGATCCGACCGCGCATAAAGGCGAGTCAGTTCCTGAACAGCCAGGCATTGTTACCGGAGACGAA ACGGGGCAGGTTACGGTGGTGGCACTGGCGACACTGCATACAAAATGTAATGGTTCAGTGATATTTGTTTCACCGGGAAC GTCGTTTCGTGTTTCTGCTGAGGTGGCTGCCAGCATGGCGGCAGGTGGTCTGGCAAAAAGGCAGTAA
Upstream 100 bases:
>100_bases GATGGTGCTGCCGGATCCGGATGAGTTTGTGGTGGTGCAGGTGAAATAATCCGTGAGCGGGAGCTAAATGCTCCCGTTTT TCATTCAATCAGGAGCGGGT
Downstream 100 bases:
>100_bases CAGGAGATGTCGTGGACGGTTTCGATAATCTGTTTGATGCTGCGCTTGCCGGTGTCAATGAAGTCATTCTCCGTGATATG GGGATCAGCGCCGTCATTAC
Product: putative DNA-packaging protein
Products: NA
Alternate protein names: DNA Packaging Protein Bacteriophage Origin; Phage DNA-Packaging Protein
Number of amino acids: Translated: 128; Mature: 127
Protein sequence:
>128_residues MATKEENLKRLCELAERLGREPDVSGSAADIAQRVAELEEELGDAGEVAEPDTYSPSKDDPTAHKGESVPEQPGIVTGDE TGQVTVVALATLHTKCNGSVIFVSPGTSFRVSAEVAASMAAGGLAKRQ
Sequences:
>Translated_128_residues MATKEENLKRLCELAERLGREPDVSGSAADIAQRVAELEEELGDAGEVAEPDTYSPSKDDPTAHKGESVPEQPGIVTGDE TGQVTVVALATLHTKCNGSVIFVSPGTSFRVSAEVAASMAAGGLAKRQ >Mature_127_residues ATKEENLKRLCELAERLGREPDVSGSAADIAQRVAELEEELGDAGEVAEPDTYSPSKDDPTAHKGESVPEQPGIVTGDET GQVTVVALATLHTKCNGSVIFVSPGTSFRVSAEVAASMAAGGLAKRQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13309; Mature: 13178
Theoretical pI: Translated: 4.30; Mature: 4.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATKEENLKRLCELAERLGREPDVSGSAADIAQRVAELEEELGDAGEVAEPDTYSPSKDD CCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC PTAHKGESVPEQPGIVTGDETGQVTVVALATLHTKCNGSVIFVSPGTSFRVSAEVAASMA CCCCCCCCCCCCCCEEECCCCCCEEEEEEEHHHHCCCCEEEEECCCCCEEEHHHHHHHHH AGGLAKRQ HCCCCCCC >Mature Secondary Structure ATKEENLKRLCELAERLGREPDVSGSAADIAQRVAELEEELGDAGEVAEPDTYSPSKDD CCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC PTAHKGESVPEQPGIVTGDETGQVTVVALATLHTKCNGSVIFVSPGTSFRVSAEVAASMA CCCCCCCCCCCCCCEEECCCCCCEEEEEEEHHHHCCCCEEEEECCCCCEEEHHHHHHHHH AGGLAKRQ HCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA