Click here to switch to the map view.

The map label for this gene is yceG

Identifier: 30023983

GI number: 30023983

Start: 245056

End: 245598

Strand: Reverse

Name: yceG

Synonym: L45062

Alternate gene names: 30023983

Gene position: 245598-245056 (Counterclockwise)

Preceding gene: 15672234

Following gene: 15672220

Centisome position: 10.38

GC content: 27.44

Gene sequence:

>543_bases
ATGAAAAAATCAATCATTACACAAAAAATTATTGCAAAAGCTTTTAAAGACCTGATGCAAAGTAATGCTTATCACCAGAT
CTCTGTCAGTGATATCATGCAAACTGCAAAAATTAGACGACAAACTTTTTATAATTATTTTCAGAACCAAGAAGAGCTTT
TATCTTGGATTTTTGAGAATGATTTTGCCGAATTAATTAATGATAATTCGGATTATTATGGCTGGCAAAATGAACTCTTA
CTCTTATTACGCTACTTAGATGAAAATCAAATTTTTTATCAAAAAATATTTGTTATAGATAAAAATTTTGAACACTTTTT
CCTTATTCAATGGGAAAACTTACTTGATAAGGTTATTTTTGACCAAGAAAAAAAGTCTGACTATCATTGGTCAGACTTAG
AAAAATCTTTTATATGTCGTTATAATGCTGCAGCAATTTGTGCAATAACTAGAGAATCAATCATTAGAGGAAATTCTTTA
GAAAAGCTTTATTCTCAGATTGTAAATCTTTTACTTGCTCAAATTAAAATTTTTGAAAGCTGA

Upstream 100 bases:

>100_bases
CACTCATCCTCCTGAGTTTCTTATGTTATACTTAGTATAAAATATAAAGTCCATAAAAATAAGGGACAAATCGCAAAATG
TGTCCGCTTTCTTTTTAAAT

Downstream 100 bases:

>100_bases
TTACCATGCAAAAGCTCCCGTTGGAACATTCAGATAGTCCAACCATTTAGGATCTTTAACAGAACAAAGCGTTAATGAAA
TTCCTGACATATCACAACTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MKKSIITQKIIAKAFKDLMQSNAYHQISVSDIMQTAKIRRQTFYNYFQNQEELLSWIFENDFAELINDNSDYYGWQNELL
LLLRYLDENQIFYQKIFVIDKNFEHFFLIQWENLLDKVIFDQEKKSDYHWSDLEKSFICRYNAAAICAITRESIIRGNSL
EKLYSQIVNLLLAQIKIFES

Sequences:

>Translated_180_residues
MKKSIITQKIIAKAFKDLMQSNAYHQISVSDIMQTAKIRRQTFYNYFQNQEELLSWIFENDFAELINDNSDYYGWQNELL
LLLRYLDENQIFYQKIFVIDKNFEHFFLIQWENLLDKVIFDQEKKSDYHWSDLEKSFICRYNAAAICAITRESIIRGNSL
EKLYSQIVNLLLAQIKIFES
>Mature_180_residues
MKKSIITQKIIAKAFKDLMQSNAYHQISVSDIMQTAKIRRQTFYNYFQNQEELLSWIFENDFAELINDNSDYYGWQNELL
LLLRYLDENQIFYQKIFVIDKNFEHFFLIQWENLLDKVIFDQEKKSDYHWSDLEKSFICRYNAAAICAITRESIIRGNSL
EKLYSQIVNLLLAQIKIFES

Specific function: In complex with dhaQ, upon activation by dihydroxyacetone, activates transcription of the dhaKLM operon. Binds the inverted repeat sequence 5'-GGACACATN(6)ATTTGTCC-3' located upstream of and partially overlapping with the -35 promoter sequence of the dhaK

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH tetR-type DNA-binding domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): DHAS_LACLA (Q9CIV9)

Other databases:

- EMBL:   AE005176
- PIR:   G86655
- RefSeq:   NP_266403.2
- PDB:   2IU5
- PDBsum:   2IU5
- ProteinModelPortal:   Q9CIV9
- SMR:   Q9CIV9
- GeneID:   1113857
- GenomeReviews:   AE005176_GR
- KEGG:   lla:L45062
- NMPDR:   fig|272623.1.peg.255
- HOGENOM:   HBG702660
- OMA:   SVVDIMD
- ProtClustDB:   CLSK2758202
- BioCyc:   LLAC272623:L45062-MONOMER
- InterPro:   IPR009057
- InterPro:   IPR015893
- InterPro:   IPR012738
- InterPro:   IPR001647
- Gene3D:   G3DSA:1.10.357.10
- TIGRFAMs:   TIGR02366

Pfam domain/function: PF00440 TetR_N; SSF46689 Homeodomain_like

EC number: NA

Molecular weight: Translated: 21670; Mature: 21670

Theoretical pI: Translated: 5.31; Mature: 5.31

Prosite motif: PS01081 HTH_TETR_1; PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKSIITQKIIAKAFKDLMQSNAYHQISVSDIMQTAKIRRQTFYNYFQNQEELLSWIFEN
CCCHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
DFAELINDNSDYYGWQNELLLLLRYLDENQIFYQKIFVIDKNFEHFFLIQWENLLDKVIF
HHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHEEEEECCCCEEEEEEHHHHHHHHHH
DQEKKSDYHWSDLEKSFICRYNAAAICAITRESIIRGNSLEKLYSQIVNLLLAQIKIFES
CCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKKSIITQKIIAKAFKDLMQSNAYHQISVSDIMQTAKIRRQTFYNYFQNQEELLSWIFEN
CCCHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
DFAELINDNSDYYGWQNELLLLLRYLDENQIFYQKIFVIDKNFEHFFLIQWENLLDKVIF
HHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHEEEEECCCCEEEEEEHHHHHHHHHH
DQEKKSDYHWSDLEKSFICRYNAAAICAITRESIIRGNSLEKLYSQIVNLLLAQIKIFES
CCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11337471