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The map label for this gene is 29349740

Identifier: 29349740

GI number: 29349740

Start: 5705567

End: 5706217

Strand: Reverse

Name: 29349740

Synonym: BT_4332

Alternate gene names: NA

Gene position: 5706217-5705567 (Counterclockwise)

Preceding gene: 29349741

Following gene: 29349739

Centisome position: 91.15

GC content: 47.47

Gene sequence:

>651_bases
ATGATAGTAAGAAGAAGTATAAATAAAGACGAACTAAAGGAACTCCCGAAAACTGTATTTCCGGGACGAATCCATGTGAT
CCAGTCGGAAGCGGAAACAGAAAAAGCAGTAGCTTACCTGCAATCTCAGCCGATACTGGGTATCGATAGCGAAACGCGCC
CATCCTTCACCAAAGGACAAAGTCATAAAGTAGCACTTCTGCAGATTTCTTCAGACGAATGCTGTTTCCTGTTCCGCCTC
AATATGACCGGACTCACCCAACCTTTGGTCGACCTGCTGGAAAATCCGGCTGTTATCAAAGTAGGACTGTCGCTCAAAGA
CGACTTTATGATGCTGCACAAACGTGCACCTTTTACCCAACAGAGCTGCATCGAACTGCAAGACTATGTACGCCAGTTCG
GCATACAGGACAAAAGTCTGCAAAAGATTTATGCAATCCTGTTCAAAGAAAAGATTTCCAAATCACAACGGCTGTCCAAC
TGGGAAGCGGACGTACTGAGCGACGGACAGAAACAATATGCCGCTACCGATGCCTGGGCTTGCCTCAACATCTACAACCT
GTTGCAGGAACTGAAACGAACCGGCAACTACGAGGTCGAAAGCCTCCCTGTAGAAGAAGAGGTTGACGCAAATGCTCCCG
CCAATCGCTGA

Upstream 100 bases:

>100_bases
TGACGACTATTGTTGTGAAGAAGACGGTTGTCACTGCCACGACGACGAATGTCATTGTCATGAGGACGGTTGCCATTGTC
GTAATGACGAATAAACAAAA

Downstream 100 bases:

>100_bases
CAAATGACCGATAAAAGACTAATTAATAACTGATAAAATAGCATTTTAAACAACATGCATAAAGTATACCTCAAACCCGG
CAAAGAAGAGTCTTTAAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: 3-5' Exonuclease Domain Protein; 3 Exoribonuclease Family Protein; 3- 5' Exonuclease Domain Protein; Ribonuclease D; Exonuclease

Number of amino acids: Translated: 216; Mature: 216

Protein sequence:

>216_residues
MIVRRSINKDELKELPKTVFPGRIHVIQSEAETEKAVAYLQSQPILGIDSETRPSFTKGQSHKVALLQISSDECCFLFRL
NMTGLTQPLVDLLENPAVIKVGLSLKDDFMMLHKRAPFTQQSCIELQDYVRQFGIQDKSLQKIYAILFKEKISKSQRLSN
WEADVLSDGQKQYAATDAWACLNIYNLLQELKRTGNYEVESLPVEEEVDANAPANR

Sequences:

>Translated_216_residues
MIVRRSINKDELKELPKTVFPGRIHVIQSEAETEKAVAYLQSQPILGIDSETRPSFTKGQSHKVALLQISSDECCFLFRL
NMTGLTQPLVDLLENPAVIKVGLSLKDDFMMLHKRAPFTQQSCIELQDYVRQFGIQDKSLQKIYAILFKEKISKSQRLSN
WEADVLSDGQKQYAATDAWACLNIYNLLQELKRTGNYEVESLPVEEEVDANAPANR
>Mature_216_residues
MIVRRSINKDELKELPKTVFPGRIHVIQSEAETEKAVAYLQSQPILGIDSETRPSFTKGQSHKVALLQISSDECCFLFRL
NMTGLTQPLVDLLENPAVIKVGLSLKDDFMMLHKRAPFTQQSCIELQDYVRQFGIQDKSLQKIYAILFKEKISKSQRLSN
WEADVLSDGQKQYAATDAWACLNIYNLLQELKRTGNYEVESLPVEEEVDANAPANR

Specific function: Unknown

COG id: COG0749

COG function: function code L; DNA polymerase I - 3'-5' exonuclease and polymerase domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI110735439, Length=203, Percent_Identity=33.0049261083744, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI21356549, Length=155, Percent_Identity=36.7741935483871, Blast_Score=69, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24563; Mature: 24563

Theoretical pI: Translated: 5.79; Mature: 5.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVRRSINKDELKELPKTVFPGRIHVIQSEAETEKAVAYLQSQPILGIDSETRPSFTKGQ
CCCCCCCCHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
SHKVALLQISSDECCFLFRLNMTGLTQPLVDLLENPAVIKVGLSLKDDFMMLHKRAPFTQ
CCEEEEEEECCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCHHHHHHHHCCCCCH
QSCIELQDYVRQFGIQDKSLQKIYAILFKEKISKSQRLSNWEADVLSDGQKQYAATDAWA
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHH
CLNIYNLLQELKRTGNYEVESLPVEEEVDANAPANR
HHHHHHHHHHHHHCCCCCEECCCCHHCCCCCCCCCC
>Mature Secondary Structure
MIVRRSINKDELKELPKTVFPGRIHVIQSEAETEKAVAYLQSQPILGIDSETRPSFTKGQ
CCCCCCCCHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
SHKVALLQISSDECCFLFRLNMTGLTQPLVDLLENPAVIKVGLSLKDDFMMLHKRAPFTQ
CCEEEEEEECCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCHHHHHHHHCCCCCH
QSCIELQDYVRQFGIQDKSLQKIYAILFKEKISKSQRLSNWEADVLSDGQKQYAATDAWA
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHH
CLNIYNLLQELKRTGNYEVESLPVEEEVDANAPANR
HHHHHHHHHHHHHCCCCCEECCCCHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA