Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29349741

Identifier: 29349741

GI number: 29349741

Start: 5706224

End: 5706883

Strand: Reverse

Name: 29349741

Synonym: BT_4333

Alternate gene names: NA

Gene position: 5706883-5706224 (Counterclockwise)

Preceding gene: 29349745

Following gene: 29349740

Centisome position: 91.16

GC content: 45.61

Gene sequence:

>660_bases
ATGGAAAAAGAAAGCCAAACGATATTTGAAAAGAATGTGATCGAGTTCGTAACGGTAGCCGCCGAATTTTGCGCATTCCT
CGAACGTGCCGAACACATGAAGCGCAAAGCTTTTGTCGACACGTCCTTAAAAATACTTCCCCTGCTCTATCTCAAAGCAT
CCTTGCTTCCGAAGTGTGAAACAATCGGAGACGAGGCACCCGAAACGTATGTGACGGAGGAAATTTACGAGATTCTGCGT
ATCAATCTAGCAGGGCTGATGGGTGAAAAGGATGATTATCTGGACGTTTTCGTACAGGATATGGTGTACAGTGACCAGCC
TATCAAAAAGTCCGTCTCGGAAGATTTGGCGGATATCTATCAGGATATCAAAGATTTTATTTTCGTCTTCCAGCTGGGAC
TGAACGAAACCATGAACGACTCGTTGGCCATCTGCCAGGAAAACTTCGGTCTGCTGTGGGGACAGAAGTTGGTAAACACT
CTGCGTGCCCTTCACGATGTGAAGTATAACCAGCAGAATGAGAATGACGAAGAAGACAACGAGGAAGAGAATAACGAACT
AAGCGATGACGACTATTGTTGTGAAGAAGACGGTTGTCACTGCCACGACGACGAATGTCATTGTCATGAGGACGGTTGCC
ATTGTCGTAATGACGAATAA

Upstream 100 bases:

>100_bases
TTGGAATCCGTATTATAAGCCGCAAAAATAATAAAAAAATAACGAGCAGTACTCTCATTCAATCCTTTTTCTTACCTTTG
CGATTCAAATCAATCTGATT

Downstream 100 bases:

>100_bases
ACAAAAATGATAGTAAGAAGAAGTATAAATAAAGACGAACTAAAGGAACTCCCGAAAACTGTATTTCCGGGACGAATCCA
TGTGATCCAGTCGGAAGCGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 219; Mature: 219

Protein sequence:

>219_residues
MEKESQTIFEKNVIEFVTVAAEFCAFLERAEHMKRKAFVDTSLKILPLLYLKASLLPKCETIGDEAPETYVTEEIYEILR
INLAGLMGEKDDYLDVFVQDMVYSDQPIKKSVSEDLADIYQDIKDFIFVFQLGLNETMNDSLAICQENFGLLWGQKLVNT
LRALHDVKYNQQNENDEEDNEEENNELSDDDYCCEEDGCHCHDDECHCHEDGCHCRNDE

Sequences:

>Translated_219_residues
MEKESQTIFEKNVIEFVTVAAEFCAFLERAEHMKRKAFVDTSLKILPLLYLKASLLPKCETIGDEAPETYVTEEIYEILR
INLAGLMGEKDDYLDVFVQDMVYSDQPIKKSVSEDLADIYQDIKDFIFVFQLGLNETMNDSLAICQENFGLLWGQKLVNT
LRALHDVKYNQQNENDEEDNEEENNELSDDDYCCEEDGCHCHDDECHCHEDGCHCRNDE
>Mature_219_residues
MEKESQTIFEKNVIEFVTVAAEFCAFLERAEHMKRKAFVDTSLKILPLLYLKASLLPKCETIGDEAPETYVTEEIYEILR
INLAGLMGEKDDYLDVFVQDMVYSDQPIKKSVSEDLADIYQDIKDFIFVFQLGLNETMNDSLAICQENFGLLWGQKLVNT
LRALHDVKYNQQNENDEEDNEEENNELSDDDYCCEEDGCHCHDDECHCHEDGCHCRNDE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25376; Mature: 25376

Theoretical pI: Translated: 3.99; Mature: 3.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
7.3 %Cys+Met (Translated Protein)
5.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
7.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKESQTIFEKNVIEFVTVAAEFCAFLERAEHMKRKAFVDTSLKILPLLYLKASLLPKCE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
TIGDEAPETYVTEEIYEILRINLAGLMGEKDDYLDVFVQDMVYSDQPIKKSVSEDLADIY
HCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
QDIKDFIFVFQLGLNETMNDSLAICQENFGLLWGQKLVNTLRALHDVKYNQQNENDEEDN
HHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
EEENNELSDDDYCCEEDGCHCHDDECHCHEDGCHCRNDE
CHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MEKESQTIFEKNVIEFVTVAAEFCAFLERAEHMKRKAFVDTSLKILPLLYLKASLLPKCE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
TIGDEAPETYVTEEIYEILRINLAGLMGEKDDYLDVFVQDMVYSDQPIKKSVSEDLADIY
HCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
QDIKDFIFVFQLGLNETMNDSLAICQENFGLLWGQKLVNTLRALHDVKYNQQNENDEEDN
HHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
EEENNELSDDDYCCEEDGCHCHDDECHCHEDGCHCRNDE
CHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA