Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29349654

Identifier: 29349654

GI number: 29349654

Start: 5594092

End: 5596020

Strand: Reverse

Name: 29349654

Synonym: BT_4246

Alternate gene names: NA

Gene position: 5596020-5594092 (Counterclockwise)

Preceding gene: 29349655

Following gene: 29349653

Centisome position: 89.39

GC content: 43.18

Gene sequence:

>1929_bases
ATGAAACTAACACGCATCTTTCAAAATATAAGTATAGCAGTTATTATCACTGCATTGGGCTTAACCTCATGTGATTATCT
AGACGTCGTTCCACCCGAACAACCCAATATCGATGACGCAATGTCAAGCCCCACCCGAGCTTTAGGATTTCTTTATTCCT
GTTATGGAGGTGTCAGTACAGACTTACCCAGTGCCTATCTGGGGGAAATAAACTCTACGACAGACGAATATGTATTACCT
TATTCATGGAACACAGACGGTTATTGGGGCGCCTATGCATTTAACACTGCATCATCCACTAACCAAGACTGGCTATGGGG
AACTACTTACCAATATATAGGACAATGTTATCTGTTTTTACAAAAGTTGGAAAATGCGGGAAGCGACATTGCATCTGATG
CAGAAAAGGAACAATGGAGAGCCGAATGCCAATTCCTGGTAGCTTATTACCACTTCGCTACTTTAAGAAGATATGGTCCC
ATCCCAATTACAGACTCGTACATTCCGATGGATACCCCAACGTCAGAGTATAATGGACGTTTTCACTTTGACTATTGTGT
AGACTGGATTGCGAACCAGCTGGATGAAGCCGCCAAAGTACTTCCTGCCAACCGCACCGTTACCAATGAATGGGGTCGCG
CTACATCTACTATAGCTAAAGCTGTAAAAGCACGTTTGTTACTTTATGCCGCATCTCCTTTATGGAACGGAAGTTTCCCC
TACCCTAACTGGCAGAATGAGAATTTCGAGACTCCGGGTTACGGTAAAGCTTTGGTAAGCAATACTTATGACAAGAGCAA
ATGGGAAAGAGCACTGGCCGCATGTCAGGAAGCACTTACATTAGCTACAACTTCCGGTGACCGTGAACTTTACGATGACG
ACGAATATTACTCCCGACAATCCCTGAACTTACCTTTTGTTCCCGGAGTAGCAGACGTGGAAGATAATAAAGAATTCCTG
AAAAACGTAATGAAGATGCGCTATGCCGTAAGTACACGTGAATCTGAAGGAAACAAAGAAATTATCTGGGGATTATCCAA
CCAGTTTGATTTTTATTCCCGTTATCCGCTTCGTATTCTGAAGAAATCGGATGGAACATGGCATGCTGGTTATAGTGGTG
TATCTCCTACATTATATACGTTCGAACATTTCTATACAGCTAACGGGAAACTACCTGAAAAAGACCTTGACTTTACTCCT
TCCTCTGAATGGTTTGAGTCAGCAGGTATCTCTTCACGGGAAGACATTATCAAATTGAATGTGGGTCGTGAACCTCGTTT
CTATGCATGGATGGCTTTTGACGGTGGTGACTACGGAACTAAATTTGCGGCCGGTTCTCCTCTGAAACTGGAAATGAGGA
ATTCGGAAATGCACGGTTACAATCCGTCTCTATTTAATCGTGACCATAGTGTCACAGGGTTCCTGACACAAAAGTTTGTT
GATCCGGTAACTGAATTCTATACAGCCGGCGGTTCTACAAGCGGAACAAGCGCACCTACTATCTTATTCCGCCTGGCCGA
ACTCTACCTAAACGTAGCAGAATGCCATGCAGCATTAGGAAATACACAGGAAGCCATTGATGCACTAAATCCTGTTCGTG
AACGTGCCGGAATCCCTAAATTAACATTGGCTGATATCACAAATAATATGACAATAAAAGACTGGGTACACAATGAACGT
TTTGTTGAATTATGGAACGAAGGTCACCGCTTCTTCGATGTCCGCCGTTGGGCAGAAGGAGCCAAGTACTTTGGAGCAAA
CAAACGGGAAGGATTGAATGCAGAAGTTCAAAGTCCCACATTCGAAGAATTTAATAAACGAACTACAGTTGATGCACCTT
ATGTGTGGGAAAACCGCATGTACCTGAATCCGGTATTCTACAACGAAGTATACAAAAATCCGCAAATGGTACAAGCACCC
GGATATTAA

Upstream 100 bases:

>100_bases
CCTTTGGGATCCTGAACTGTCTTCTTGGAACAGTTATCCTATGCAAAAAACTGTCAATGTCGGAATTCAACTTCAGTTCT
AATTTATTATGAGAAAAAAT

Downstream 100 bases:

>100_bases
TTATTTTTTATTCATTCATAACAATATAGAATATATATGAAACATATATCAATAGCATTGTGTTTGTGCGGGATGATTCT
GATGAATACTTCCTGCGACA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 642; Mature: 642

Protein sequence:

>642_residues
MKLTRIFQNISIAVIITALGLTSCDYLDVVPPEQPNIDDAMSSPTRALGFLYSCYGGVSTDLPSAYLGEINSTTDEYVLP
YSWNTDGYWGAYAFNTASSTNQDWLWGTTYQYIGQCYLFLQKLENAGSDIASDAEKEQWRAECQFLVAYYHFATLRRYGP
IPITDSYIPMDTPTSEYNGRFHFDYCVDWIANQLDEAAKVLPANRTVTNEWGRATSTIAKAVKARLLLYAASPLWNGSFP
YPNWQNENFETPGYGKALVSNTYDKSKWERALAACQEALTLATTSGDRELYDDDEYYSRQSLNLPFVPGVADVEDNKEFL
KNVMKMRYAVSTRESEGNKEIIWGLSNQFDFYSRYPLRILKKSDGTWHAGYSGVSPTLYTFEHFYTANGKLPEKDLDFTP
SSEWFESAGISSREDIIKLNVGREPRFYAWMAFDGGDYGTKFAAGSPLKLEMRNSEMHGYNPSLFNRDHSVTGFLTQKFV
DPVTEFYTAGGSTSGTSAPTILFRLAELYLNVAECHAALGNTQEAIDALNPVRERAGIPKLTLADITNNMTIKDWVHNER
FVELWNEGHRFFDVRRWAEGAKYFGANKREGLNAEVQSPTFEEFNKRTTVDAPYVWENRMYLNPVFYNEVYKNPQMVQAP
GY

Sequences:

>Translated_642_residues
MKLTRIFQNISIAVIITALGLTSCDYLDVVPPEQPNIDDAMSSPTRALGFLYSCYGGVSTDLPSAYLGEINSTTDEYVLP
YSWNTDGYWGAYAFNTASSTNQDWLWGTTYQYIGQCYLFLQKLENAGSDIASDAEKEQWRAECQFLVAYYHFATLRRYGP
IPITDSYIPMDTPTSEYNGRFHFDYCVDWIANQLDEAAKVLPANRTVTNEWGRATSTIAKAVKARLLLYAASPLWNGSFP
YPNWQNENFETPGYGKALVSNTYDKSKWERALAACQEALTLATTSGDRELYDDDEYYSRQSLNLPFVPGVADVEDNKEFL
KNVMKMRYAVSTRESEGNKEIIWGLSNQFDFYSRYPLRILKKSDGTWHAGYSGVSPTLYTFEHFYTANGKLPEKDLDFTP
SSEWFESAGISSREDIIKLNVGREPRFYAWMAFDGGDYGTKFAAGSPLKLEMRNSEMHGYNPSLFNRDHSVTGFLTQKFV
DPVTEFYTAGGSTSGTSAPTILFRLAELYLNVAECHAALGNTQEAIDALNPVRERAGIPKLTLADITNNMTIKDWVHNER
FVELWNEGHRFFDVRRWAEGAKYFGANKREGLNAEVQSPTFEEFNKRTTVDAPYVWENRMYLNPVFYNEVYKNPQMVQAP
GY
>Mature_642_residues
MKLTRIFQNISIAVIITALGLTSCDYLDVVPPEQPNIDDAMSSPTRALGFLYSCYGGVSTDLPSAYLGEINSTTDEYVLP
YSWNTDGYWGAYAFNTASSTNQDWLWGTTYQYIGQCYLFLQKLENAGSDIASDAEKEQWRAECQFLVAYYHFATLRRYGP
IPITDSYIPMDTPTSEYNGRFHFDYCVDWIANQLDEAAKVLPANRTVTNEWGRATSTIAKAVKARLLLYAASPLWNGSFP
YPNWQNENFETPGYGKALVSNTYDKSKWERALAACQEALTLATTSGDRELYDDDEYYSRQSLNLPFVPGVADVEDNKEFL
KNVMKMRYAVSTRESEGNKEIIWGLSNQFDFYSRYPLRILKKSDGTWHAGYSGVSPTLYTFEHFYTANGKLPEKDLDFTP
SSEWFESAGISSREDIIKLNVGREPRFYAWMAFDGGDYGTKFAAGSPLKLEMRNSEMHGYNPSLFNRDHSVTGFLTQKFV
DPVTEFYTAGGSTSGTSAPTILFRLAELYLNVAECHAALGNTQEAIDALNPVRERAGIPKLTLADITNNMTIKDWVHNER
FVELWNEGHRFFDVRRWAEGAKYFGANKREGLNAEVQSPTFEEFNKRTTVDAPYVWENRMYLNPVFYNEVYKNPQMVQAP
GY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 72992; Mature: 72992

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLTRIFQNISIAVIITALGLTSCDYLDVVPPEQPNIDDAMSSPTRALGFLYSCYGGVST
CCHHHHHHCCHHEEHHHHHCCCCCCCEECCCCCCCCCHHHHCCHHHHHHHHHHHHCCCCC
DLPSAYLGEINSTTDEYVLPYSWNTDGYWGAYAFNTASSTNQDWLWGTTYQYIGQCYLFL
CCCCHHHCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHH
QKLENAGSDIASDAEKEQWRAECQFLVAYYHFATLRRYGPIPITDSYIPMDTPTSEYNGR
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCE
FHFDYCVDWIANQLDEAAKVLPANRTVTNEWGRATSTIAKAVKARLLLYAASPLWNGSFP
EEHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHEEECCCCCCCCCC
YPNWQNENFETPGYGKALVSNTYDKSKWERALAACQEALTLATTSGDRELYDDDEYYSRQ
CCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHEEEECCCCCCCCCCHHHHHHH
SLNLPFVPGVADVEDNKEFLKNVMKMRYAVSTRESEGNKEIIWGLSNQFDFYSRYPLRIL
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHCCCEEEE
KKSDGTWHAGYSGVSPTLYTFEHFYTANGKLPEKDLDFTPSSEWFESAGISSREDIIKLN
ECCCCCEECCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCHHHHHHCCCCCCCCEEEEE
VGREPRFYAWMAFDGGDYGTKFAAGSPLKLEMRNSEMHGYNPSLFNRDHSVTGFLTQKFV
CCCCCCEEEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCHHCCCCCCHHHHHHHHHH
DPVTEFYTAGGSTSGTSAPTILFRLAELYLNVAECHAALGNTQEAIDALNPVRERAGIPK
HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCC
LTLADITNNMTIKDWVHNERFVELWNEGHRFFDVRRWAEGAKYFGANKREGLNAEVQSPT
EEEECCCCCCEEHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
FEEFNKRTTVDAPYVWENRMYLNPVFYNEVYKNPQMVQAPGY
HHHHCCCCCCCCCEEECCCEEECCHHHHHHHCCCCEEECCCC
>Mature Secondary Structure
MKLTRIFQNISIAVIITALGLTSCDYLDVVPPEQPNIDDAMSSPTRALGFLYSCYGGVST
CCHHHHHHCCHHEEHHHHHCCCCCCCEECCCCCCCCCHHHHCCHHHHHHHHHHHHCCCCC
DLPSAYLGEINSTTDEYVLPYSWNTDGYWGAYAFNTASSTNQDWLWGTTYQYIGQCYLFL
CCCCHHHCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHH
QKLENAGSDIASDAEKEQWRAECQFLVAYYHFATLRRYGPIPITDSYIPMDTPTSEYNGR
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCE
FHFDYCVDWIANQLDEAAKVLPANRTVTNEWGRATSTIAKAVKARLLLYAASPLWNGSFP
EEHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHEEECCCCCCCCCC
YPNWQNENFETPGYGKALVSNTYDKSKWERALAACQEALTLATTSGDRELYDDDEYYSRQ
CCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHEEEECCCCCCCCCCHHHHHHH
SLNLPFVPGVADVEDNKEFLKNVMKMRYAVSTRESEGNKEIIWGLSNQFDFYSRYPLRIL
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHCCCEEEE
KKSDGTWHAGYSGVSPTLYTFEHFYTANGKLPEKDLDFTPSSEWFESAGISSREDIIKLN
ECCCCCEECCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCHHHHHHCCCCCCCCEEEEE
VGREPRFYAWMAFDGGDYGTKFAAGSPLKLEMRNSEMHGYNPSLFNRDHSVTGFLTQKFV
CCCCCCEEEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCHHCCCCCCHHHHHHHHHH
DPVTEFYTAGGSTSGTSAPTILFRLAELYLNVAECHAALGNTQEAIDALNPVRERAGIPK
HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCC
LTLADITNNMTIKDWVHNERFVELWNEGHRFFDVRRWAEGAKYFGANKREGLNAEVQSPT
EEEECCCCCCEEHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
FEEFNKRTTVDAPYVWENRMYLNPVFYNEVYKNPQMVQAPGY
HHHHCCCCCCCCCEEECCCEEECCHHHHHHHCCCCEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA