Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

Click here to switch to the map view.

The map label for this gene is 29349634

Identifier: 29349634

GI number: 29349634

Start: 5564890

End: 5565972

Strand: Reverse

Name: 29349634

Synonym: BT_4226

Alternate gene names: NA

Gene position: 5565972-5564890 (Counterclockwise)

Preceding gene: 29349635

Following gene: 29349633

Centisome position: 88.91

GC content: 38.32

Gene sequence:

>1083_bases
ATGAAACGAATCCTAACTACCATACAAGAAAAAGCAAATAACATATTGTTATTCACAATATTGGCTGGTGCAATTACATC
TTGTGATTCCATTTTGGATTACAATGAGAATTGTGACATCGAATATTGTGTCAAGTTCAAGTATGACTACAATATGGAAG
AAAAGGATGTATTCGCCGAACAAGTAAGAACTGTTACTCTTTACGCTTTTGACGATAATAACAATCTTGTTTTCCAGAAC
ACCGATGAAGGTGAGCCATTAGGAGAAGAAACCTACGCGATGAACGTAGATATAGATCTCTCGCAATACCACCTGGTGGT
ATGGGCAGGATTAAATGATGAATCATTTGCAGTCCCTTTGCTATATCCCAATCAAGCTAAAATTGACGAATTAAGAGTAA
AAACATTACGCAAAGAAGCTACTCGCAGCACCACCGAGGATGAAAAGGGACAATACATAGTAGACAACAGCCTACATTCA
CTCTGGCATGGAGAGGTTAAAAAAGGAACTACCACTCGTAGCGGCAGACAGCAAATCACCGAAGTCTCATTAGTAAAAAA
TACCAATACAATCCGTGTCGTTGTAGCACAAGTAAACCAATCAGGAGGACCTGTAACCCGCTTGACACAAAAAACTTTCG
AATGCGCCATATACGACAATAATGGTTACATGAACTATGACAACACGCTATTAGAAGATAACTTATTGACTTACAAGCCA
TACAATGTCACATCGGATGTAGTCAGTACCCGAGCTTTTAGTTCTGCAGATGAACCTGCCAAACAATACAACGGTATCGT
TAGCGAAATGAGCGTGGCAAGACTTGTGGAAAGCCAAAAGCCGGAGTTGACAATCAAAAATACTGCTACTCAGGAAGTAT
TATTCCAAAGTTCCGACTTGGTGAAATACTTCGAAGAAGTAGATGCCGAAAAATATAAAGATCGTAATTATTCTCTTCAA
GAATACTTAGACCGAGAAGATAAATATGAACTAGTGATTTTTGTAGATGAGAAATTGGCACTCATCAAAACTGTAATCCA
AGTAAACGACTGGATCATCCAACTCAATGATATCGAACTTTAA

Upstream 100 bases:

>100_bases
TTTAGGGAGAAGTCTCTTCTCCCTAAATTATACTCCGAAAGAAGAGAGTATCACATTCAAACAAAACATCCGCTCTTTAA
AAGCATAAAAAGTAAAAACA

Downstream 100 bases:

>100_bases
AATAAAGCAAAAAATGAAATACTCTCATTTGACATATTATCTGCTAGCTATCTTATGCATGATGGCAACATCGTGTGTCT
CAGACGGAGTCATGGGTGAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 360; Mature: 360

Protein sequence:

>360_residues
MKRILTTIQEKANNILLFTILAGAITSCDSILDYNENCDIEYCVKFKYDYNMEEKDVFAEQVRTVTLYAFDDNNNLVFQN
TDEGEPLGEETYAMNVDIDLSQYHLVVWAGLNDESFAVPLLYPNQAKIDELRVKTLRKEATRSTTEDEKGQYIVDNSLHS
LWHGEVKKGTTTRSGRQQITEVSLVKNTNTIRVVVAQVNQSGGPVTRLTQKTFECAIYDNNGYMNYDNTLLEDNLLTYKP
YNVTSDVVSTRAFSSADEPAKQYNGIVSEMSVARLVESQKPELTIKNTATQEVLFQSSDLVKYFEEVDAEKYKDRNYSLQ
EYLDREDKYELVIFVDEKLALIKTVIQVNDWIIQLNDIEL

Sequences:

>Translated_360_residues
MKRILTTIQEKANNILLFTILAGAITSCDSILDYNENCDIEYCVKFKYDYNMEEKDVFAEQVRTVTLYAFDDNNNLVFQN
TDEGEPLGEETYAMNVDIDLSQYHLVVWAGLNDESFAVPLLYPNQAKIDELRVKTLRKEATRSTTEDEKGQYIVDNSLHS
LWHGEVKKGTTTRSGRQQITEVSLVKNTNTIRVVVAQVNQSGGPVTRLTQKTFECAIYDNNGYMNYDNTLLEDNLLTYKP
YNVTSDVVSTRAFSSADEPAKQYNGIVSEMSVARLVESQKPELTIKNTATQEVLFQSSDLVKYFEEVDAEKYKDRNYSLQ
EYLDREDKYELVIFVDEKLALIKTVIQVNDWIIQLNDIEL
>Mature_360_residues
MKRILTTIQEKANNILLFTILAGAITSCDSILDYNENCDIEYCVKFKYDYNMEEKDVFAEQVRTVTLYAFDDNNNLVFQN
TDEGEPLGEETYAMNVDIDLSQYHLVVWAGLNDESFAVPLLYPNQAKIDELRVKTLRKEATRSTTEDEKGQYIVDNSLHS
LWHGEVKKGTTTRSGRQQITEVSLVKNTNTIRVVVAQVNQSGGPVTRLTQKTFECAIYDNNGYMNYDNTLLEDNLLTYKP
YNVTSDVVSTRAFSSADEPAKQYNGIVSEMSVARLVESQKPELTIKNTATQEVLFQSSDLVKYFEEVDAEKYKDRNYSLQ
EYLDREDKYELVIFVDEKLALIKTVIQVNDWIIQLNDIEL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41329; Mature: 41329

Theoretical pI: Translated: 4.31; Mature: 4.31

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRILTTIQEKANNILLFTILAGAITSCDSILDYNENCDIEYCVKFKYDYNMEEKDVFAE
CHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCHHHHHHH
QVRTVTLYAFDDNNNLVFQNTDEGEPLGEETYAMNVDIDLSQYHLVVWAGLNDESFAVPL
HCEEEEEEEEECCCEEEEEECCCCCCCCCCEEEEEEEEECCCEEEEEEECCCCCCEEEEE
LYPNQAKIDELRVKTLRKEATRSTTEDEKGQYIVDNSLHSLWHGEVKKGTTTRSGRQQIT
ECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEECCCHHHHHCCCCCCCCCCCCHHHHHH
EVSLVKNTNTIRVVVAQVNQSGGPVTRLTQKTFECAIYDNNGYMNYDNTLLEDNLLTYKP
EEEEEECCCEEEEEEEEECCCCCCHHHEECCEEEEEEEECCCEECCCCCEECCCCEEECC
YNVTSDVVSTRAFSSADEPAKQYNGIVSEMSVARLVESQKPELTIKNTATQEVLFQSSDL
CCCHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHCCCCCEEEECCCHHHHHHCCCHH
VKYFEEVDAEKYKDRNYSLQEYLDREDKYELVIFVDEKLALIKTVIQVNDWIIQLNDIEL
HHHHHHHCHHHHCCCCCCHHHHCCCCCCEEEEEEECCHHHHHHHHHHHCCEEEEEEECCC
>Mature Secondary Structure
MKRILTTIQEKANNILLFTILAGAITSCDSILDYNENCDIEYCVKFKYDYNMEEKDVFAE
CHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCHHHHHHH
QVRTVTLYAFDDNNNLVFQNTDEGEPLGEETYAMNVDIDLSQYHLVVWAGLNDESFAVPL
HCEEEEEEEEECCCEEEEEECCCCCCCCCCEEEEEEEEECCCEEEEEEECCCCCCEEEEE
LYPNQAKIDELRVKTLRKEATRSTTEDEKGQYIVDNSLHSLWHGEVKKGTTTRSGRQQIT
ECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEECCCHHHHHCCCCCCCCCCCCHHHHHH
EVSLVKNTNTIRVVVAQVNQSGGPVTRLTQKTFECAIYDNNGYMNYDNTLLEDNLLTYKP
EEEEEECCCEEEEEEEEECCCCCCHHHEECCEEEEEEEECCCEECCCCCEECCCCEEECC
YNVTSDVVSTRAFSSADEPAKQYNGIVSEMSVARLVESQKPELTIKNTATQEVLFQSSDL
CCCHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHCCCCCEEEECCCHHHHHHCCCHH
VKYFEEVDAEKYKDRNYSLQEYLDREDKYELVIFVDEKLALIKTVIQVNDWIIQLNDIEL
HHHHHHHCHHHHCCCCCCHHHHCCCCCCEEEEEEECCHHHHHHHHHHHCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA