Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29349635

Identifier: 29349635

GI number: 29349635

Start: 5566091

End: 5567371

Strand: Reverse

Name: 29349635

Synonym: BT_4227

Alternate gene names: NA

Gene position: 5567371-5566091 (Counterclockwise)

Preceding gene: 29349636

Following gene: 29349634

Centisome position: 88.93

GC content: 36.22

Gene sequence:

>1281_bases
ATGAAAGTAAAGAATTTATTATTAGCAGGTTTGGCAGTAGCAGCCATGACAGCTTGTAGCAATGACGAAATCATTGACAA
TGATGGAATCCAAACAAATGGTGAAAATGCAGCAATGCAAATCAATTTCCAGTTTCCCACAACTAGAGTTGTATCAGATG
GTGGCACAAATGCAGGTATAGATATTGAGTATGCAGCTACTGAAATTACAGCAGTTTTAGAGTACACTGAAACAAACAAA
AGAATTGTTGTAAAAGGATTAACCTTTGGTCAACAAACTGAAAGTGGTGCTAGAATATACAGCACAGAGAAATTCCAAGT
TGAAGCAGGAAACAATGTAAAGGTTTACGCATTTATTAATCCTATTATGGAGATACCAACAACTGGTTTGGAGAATTTAA
AGGTTGGAAAACAAAAATTACCAAGTGAAGGTTTGGATTATATAGCTGAAACAATAGCTAAATCTGGTAATTTTATGATG
AGCAATGTTAATGGAGAACCTACTGTAATAAAAGCAATTGTAGGTGGAACAGATACCAATACAGCAAACATTAGCGTTGA
ACGAATCAGTGCAAAATTAACAGAAGAGACAAAGCGCTCTATAGACAACAAATATGAATTAACAACTCCCACTTTCGTAG
GACCAAAGGTGTATGTACAAATTTTGAGCCATACATACACTAATCTAGCTGACGATTCTTATGTACTTGGTGGTAGAAAT
GCAGCATGGTCGTCATTCTTACACCCATATAAAACAGGTGAAGTAAGTGAGACTGATTACAGATGGTTGAATGCAACAGG
AACAACATACGTACTCGAAAATTTAGGTAGTGAATGGAATACAGCAACTAGCACCAGCGTTCTTTATCAAGGACAAGTTT
TCTTCGAAAATGACGGAAATCAAGAAATAGCAGGAACATTCTACAGCAGACCTAAATTACAAAGTGATGGTGAAACATGG
AAAGTTCAAATTTACAAGAATTGGGAAGAATTATGTGCAGATGTTGATCTTACTGGTATTGGAGAAAATGACGACGTAGC
TTTGGCTAACAGAAGTATCATGAGATATGCAGGAGGAAAATGCTATTATCAAGCACCTATCGAGCATTTTGGTGTTGGAG
CTAATATCGCTCGCAATAACTGGTACCAACTAAAAGTTACTTCTATTGCTGATTTAGGTTATCCGAAACCTGTACCTCCA
ACTCCTGAAAATGAAACGAAATTAATGATGAGTGTTACTATAGCTCCTTGGACTATCCATATCAATAATGTTGGTCTTTA
A

Upstream 100 bases:

>100_bases
AAAAAAAAGAAAAAACAATTAGCGTATTATACATACATAGTATAATATGCAAACCCTAAAAAAAAGAATTATAGCATCAC
ACATTAAAATCAAAACTAAA

Downstream 100 bases:

>100_bases
TCAACTATAATAAATTAATTTAGGGAGAAGTCTCTTCTCCCTAAATTATACTCCGAAAGAAGAGAGTATCACATTCAAAC
AAAACATCCGCTCTTTAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 426; Mature: 426

Protein sequence:

>426_residues
MKVKNLLLAGLAVAAMTACSNDEIIDNDGIQTNGENAAMQINFQFPTTRVVSDGGTNAGIDIEYAATEITAVLEYTETNK
RIVVKGLTFGQQTESGARIYSTEKFQVEAGNNVKVYAFINPIMEIPTTGLENLKVGKQKLPSEGLDYIAETIAKSGNFMM
SNVNGEPTVIKAIVGGTDTNTANISVERISAKLTEETKRSIDNKYELTTPTFVGPKVYVQILSHTYTNLADDSYVLGGRN
AAWSSFLHPYKTGEVSETDYRWLNATGTTYVLENLGSEWNTATSTSVLYQGQVFFENDGNQEIAGTFYSRPKLQSDGETW
KVQIYKNWEELCADVDLTGIGENDDVALANRSIMRYAGGKCYYQAPIEHFGVGANIARNNWYQLKVTSIADLGYPKPVPP
TPENETKLMMSVTIAPWTIHINNVGL

Sequences:

>Translated_426_residues
MKVKNLLLAGLAVAAMTACSNDEIIDNDGIQTNGENAAMQINFQFPTTRVVSDGGTNAGIDIEYAATEITAVLEYTETNK
RIVVKGLTFGQQTESGARIYSTEKFQVEAGNNVKVYAFINPIMEIPTTGLENLKVGKQKLPSEGLDYIAETIAKSGNFMM
SNVNGEPTVIKAIVGGTDTNTANISVERISAKLTEETKRSIDNKYELTTPTFVGPKVYVQILSHTYTNLADDSYVLGGRN
AAWSSFLHPYKTGEVSETDYRWLNATGTTYVLENLGSEWNTATSTSVLYQGQVFFENDGNQEIAGTFYSRPKLQSDGETW
KVQIYKNWEELCADVDLTGIGENDDVALANRSIMRYAGGKCYYQAPIEHFGVGANIARNNWYQLKVTSIADLGYPKPVPP
TPENETKLMMSVTIAPWTIHINNVGL
>Mature_426_residues
MKVKNLLLAGLAVAAMTACSNDEIIDNDGIQTNGENAAMQINFQFPTTRVVSDGGTNAGIDIEYAATEITAVLEYTETNK
RIVVKGLTFGQQTESGARIYSTEKFQVEAGNNVKVYAFINPIMEIPTTGLENLKVGKQKLPSEGLDYIAETIAKSGNFMM
SNVNGEPTVIKAIVGGTDTNTANISVERISAKLTEETKRSIDNKYELTTPTFVGPKVYVQILSHTYTNLADDSYVLGGRN
AAWSSFLHPYKTGEVSETDYRWLNATGTTYVLENLGSEWNTATSTSVLYQGQVFFENDGNQEIAGTFYSRPKLQSDGETW
KVQIYKNWEELCADVDLTGIGENDDVALANRSIMRYAGGKCYYQAPIEHFGVGANIARNNWYQLKVTSIADLGYPKPVPP
TPENETKLMMSVTIAPWTIHINNVGL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46785; Mature: 46785

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVKNLLLAGLAVAAMTACSNDEIIDNDGIQTNGENAAMQINFQFPTTRVVSDGGTNAGI
CCHHHHHHHHHHHHHHHHCCCCCEECCCCCEECCCCEEEEEEEECCCEEEEECCCCCCCE
DIEYAATEITAVLEYTETNKRIVVKGLTFGQQTESGARIYSTEKFQVEAGNNVKVYAFIN
EEEEEHHEEEEEEEEECCCCEEEEEEEECCCCCCCCCEEEEEEEEEEECCCCEEEEEEEC
PIMEIPTTGLENLKVGKQKLPSEGLDYIAETIAKSGNFMMSNVNGEPTVIKAIVGGTDTN
CHHHCCCCCCCCCCCCHHHCCHHHHHHHHHHHHCCCCEEEECCCCCCEEEEEEECCCCCC
TANISVERISAKLTEETKRSIDNKYELTTPTFVGPKVYVQILSHTYTNLADDSYVLGGRN
CEEEEEEHHHHHHHHHHHHHCCCCEEECCCCEECHHHHHHHHHHHHHCCCCCCEEECCCC
AAWSSFLHPYKTGEVSETDYRWLNATGTTYVLENLGSEWNTATSTSVLYQGQVFFENDGN
HHHHHHCCCCCCCCCCCCCCEEEECCCCCHHHHHCCCCCCCCCCCEEEEEEEEEEECCCC
QEIAGTFYSRPKLQSDGETWKVQIYKNWEELCADVDLTGIGENDDVALANRSIMRYAGGK
CEEEEEEECCCCCCCCCCEEEEEEEECHHHHHCCCCEECCCCCCCEEECCCHHHHHCCCE
CYYQAPIEHFGVGANIARNNWYQLKVTSIADLGYPKPVPPTPENETKLMMSVTIAPWTIH
EEEECCHHHCCCCCEEECCCEEEEEEEEEECCCCCCCCCCCCCCCCEEEEEEEEEEEEEE
INNVGL
EECCCC
>Mature Secondary Structure
MKVKNLLLAGLAVAAMTACSNDEIIDNDGIQTNGENAAMQINFQFPTTRVVSDGGTNAGI
CCHHHHHHHHHHHHHHHHCCCCCEECCCCCEECCCCEEEEEEEECCCEEEEECCCCCCCE
DIEYAATEITAVLEYTETNKRIVVKGLTFGQQTESGARIYSTEKFQVEAGNNVKVYAFIN
EEEEEHHEEEEEEEEECCCCEEEEEEEECCCCCCCCCEEEEEEEEEEECCCCEEEEEEEC
PIMEIPTTGLENLKVGKQKLPSEGLDYIAETIAKSGNFMMSNVNGEPTVIKAIVGGTDTN
CHHHCCCCCCCCCCCCHHHCCHHHHHHHHHHHHCCCCEEEECCCCCCEEEEEEECCCCCC
TANISVERISAKLTEETKRSIDNKYELTTPTFVGPKVYVQILSHTYTNLADDSYVLGGRN
CEEEEEEHHHHHHHHHHHHHCCCCEEECCCCEECHHHHHHHHHHHHHCCCCCCEEECCCC
AAWSSFLHPYKTGEVSETDYRWLNATGTTYVLENLGSEWNTATSTSVLYQGQVFFENDGN
HHHHHHCCCCCCCCCCCCCCEEEECCCCCHHHHHCCCCCCCCCCCEEEEEEEEEEECCCC
QEIAGTFYSRPKLQSDGETWKVQIYKNWEELCADVDLTGIGENDDVALANRSIMRYAGGK
CEEEEEEECCCCCCCCCCEEEEEEEECHHHHHCCCCEECCCCCCCEEECCCHHHHHCCCE
CYYQAPIEHFGVGANIARNNWYQLKVTSIADLGYPKPVPPTPENETKLMMSVTIAPWTIH
EEEECCHHHCCCCCEEECCCEEEEEEEEEECCCCCCCCCCCCCCCCEEEEEEEEEEEEEE
INNVGL
EECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA