| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
Click here to switch to the map view.
The map label for this gene is 29349633
Identifier: 29349633
GI number: 29349633
Start: 5563833
End: 5564876
Strand: Reverse
Name: 29349633
Synonym: BT_4225
Alternate gene names: NA
Gene position: 5564876-5563833 (Counterclockwise)
Preceding gene: 29349634
Following gene: 29349632
Centisome position: 88.89
GC content: 37.16
Gene sequence:
>1044_bases ATGAAATACTCTCATTTGACATATTATCTGCTAGCTATCTTATGCATGATGGCAACATCGTGTGTCTCAGACGGAGTCAT GGGTGATTGTCCGATCGATAACAACGACCAAGCAGTACTAATAGAAGGTGGCAAAGTCAATTTCGCATTAACTTTCCCGA CTTCTTCCACACGAGGCATAAATGGCTCATCAGAAGGTTTAGCAAGCGAACGAACAATTAACGATGTTCAAGTATACACT TTCGTAGGAGGAAAATTCGTTGAGAAAGTAAAGTATATTCTGATAAGCGGCACCAACGGAGATGCAACCCGCTTTGTAGA AGGAAAACTGACAGAGACATATATGACAGGAACCGCTATGGATTTTGTGGTAATGGTGAATACGGAAAGTAAGGGTGTGC AATCTCCTACCATGACAAAAGGAAACAGTAAAGCTGATTTATATAAACAATTGGTTTATAGTTATGAAGGCAAAAACTGG TCAACAAATATTCCGATGTGGGGAGAGGGAACTATTGCATCCATTCAATCGGGAGAATATAATATAGGAGAACTTACATT GCAACGTGCTATTGCCAAAGTGAATGTAACGGTGAATGACGGTAAAGGATTGGAAAACTTTGAAATCACCAATGTAAGTT TACACAATTACAATAATGGCGGATATTGTGCTCCGACCAATGCGAATGGTCAACCTTCTATCCCAACCAATGTTGTTAAA GCAACAACACCTCTGTCTGCAGGCTCTCTGAGCGGAACGCAAGGCAATAATATTGAGAATAAATTCTATATTCCAGAACA TAAGAACATAGGTGTAGATAAAGCTGAACAGCTCTATTTGAAGATAGAAGCAAAAGTGAAAGGACAAATAAAATACTATG ATATTATGTTCAGTGAAAATGGAAGTGATTATGACGTTCTTCGTAACTATATGTATGTATTCAATATTACTAATGTAAAG GTGGAAGTAGATGTCAATCCTATTTTAGAATATGAAGTAAAAATATGGGAAGAAAAAACTGTGAATATTCCGTCATTTAA TTAA
Upstream 100 bases:
>100_bases ATTTTTGTAGATGAGAAATTGGCACTCATCAAAACTGTAATCCAAGTAAACGACTGGATCATCCAACTCAATGATATCGA ACTTTAAAATAAAGCAAAAA
Downstream 100 bases:
>100_bases TGCAAGGAGGATAATCAGATGAAAAAGCAAAACAATATATTGAAATTAATAAAAAATATAACATACTTGACATTAGCTTG TATAGCTTTTAATGCTTGTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 347; Mature: 347
Protein sequence:
>347_residues MKYSHLTYYLLAILCMMATSCVSDGVMGDCPIDNNDQAVLIEGGKVNFALTFPTSSTRGINGSSEGLASERTINDVQVYT FVGGKFVEKVKYILISGTNGDATRFVEGKLTETYMTGTAMDFVVMVNTESKGVQSPTMTKGNSKADLYKQLVYSYEGKNW STNIPMWGEGTIASIQSGEYNIGELTLQRAIAKVNVTVNDGKGLENFEITNVSLHNYNNGGYCAPTNANGQPSIPTNVVK ATTPLSAGSLSGTQGNNIENKFYIPEHKNIGVDKAEQLYLKIEAKVKGQIKYYDIMFSENGSDYDVLRNYMYVFNITNVK VEVDVNPILEYEVKIWEEKTVNIPSFN
Sequences:
>Translated_347_residues MKYSHLTYYLLAILCMMATSCVSDGVMGDCPIDNNDQAVLIEGGKVNFALTFPTSSTRGINGSSEGLASERTINDVQVYT FVGGKFVEKVKYILISGTNGDATRFVEGKLTETYMTGTAMDFVVMVNTESKGVQSPTMTKGNSKADLYKQLVYSYEGKNW STNIPMWGEGTIASIQSGEYNIGELTLQRAIAKVNVTVNDGKGLENFEITNVSLHNYNNGGYCAPTNANGQPSIPTNVVK ATTPLSAGSLSGTQGNNIENKFYIPEHKNIGVDKAEQLYLKIEAKVKGQIKYYDIMFSENGSDYDVLRNYMYVFNITNVK VEVDVNPILEYEVKIWEEKTVNIPSFN >Mature_347_residues MKYSHLTYYLLAILCMMATSCVSDGVMGDCPIDNNDQAVLIEGGKVNFALTFPTSSTRGINGSSEGLASERTINDVQVYT FVGGKFVEKVKYILISGTNGDATRFVEGKLTETYMTGTAMDFVVMVNTESKGVQSPTMTKGNSKADLYKQLVYSYEGKNW STNIPMWGEGTIASIQSGEYNIGELTLQRAIAKVNVTVNDGKGLENFEITNVSLHNYNNGGYCAPTNANGQPSIPTNVVK ATTPLSAGSLSGTQGNNIENKFYIPEHKNIGVDKAEQLYLKIEAKVKGQIKYYDIMFSENGSDYDVLRNYMYVFNITNVK VEVDVNPILEYEVKIWEEKTVNIPSFN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38229; Mature: 38229
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYSHLTYYLLAILCMMATSCVSDGVMGDCPIDNNDQAVLIEGGKVNFALTFPTSSTRGI CCCCHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCEEEEECCEEEEEEECCCCCCCCC NGSSEGLASERTINDVQVYTFVGGKFVEKVKYILISGTNGDATRFVEGKLTETYMTGTAM CCCCCCCCCCCCCCEEEEEEEECCHHHEEEEEEEEECCCCCEEEEEECCEEEEEECCCEE DFVVMVNTESKGVQSPTMTKGNSKADLYKQLVYSYEGKNWSTNIPMWGEGTIASIQSGEY EEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEECCCCCCCCCCEEEECCCCC NIGELTLQRAIAKVNVTVNDGKGLENFEITNVSLHNYNNGGYCAPTNANGQPSIPTNVVK CHHHHHHEEEEEEEEEEEECCCCCCCEEEEEEEEEECCCCCEECCCCCCCCCCCCCCEEE ATTPLSAGSLSGTQGNNIENKFYIPEHKNIGVDKAEQLYLKIEAKVKGQIKYYDIMFSEN ECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCEEEEEEEEEEEECEEEEEEEEECCC GSDYDVLRNYMYVFNITNVKVEVDVNPILEYEVKIWEEKTVNIPSFN CCCHHHHHCEEEEEEEEEEEEEEECCCEEEEEEEEEECEEECCCCCC >Mature Secondary Structure MKYSHLTYYLLAILCMMATSCVSDGVMGDCPIDNNDQAVLIEGGKVNFALTFPTSSTRGI CCCCHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCEEEEECCEEEEEEECCCCCCCCC NGSSEGLASERTINDVQVYTFVGGKFVEKVKYILISGTNGDATRFVEGKLTETYMTGTAM CCCCCCCCCCCCCCEEEEEEEECCHHHEEEEEEEEECCCCCEEEEEECCEEEEEECCCEE DFVVMVNTESKGVQSPTMTKGNSKADLYKQLVYSYEGKNWSTNIPMWGEGTIASIQSGEY EEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEECCCCCCCCCCEEEECCCCC NIGELTLQRAIAKVNVTVNDGKGLENFEITNVSLHNYNNGGYCAPTNANGQPSIPTNVVK CHHHHHHEEEEEEEEEEEECCCCCCCEEEEEEEEEECCCCCEECCCCCCCCCCCCCCEEE ATTPLSAGSLSGTQGNNIENKFYIPEHKNIGVDKAEQLYLKIEAKVKGQIKYYDIMFSEN ECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCEEEEEEEEEEEECEEEEEEEEECCC GSDYDVLRNYMYVFNITNVKVEVDVNPILEYEVKIWEEKTVNIPSFN CCCHHHHHCEEEEEEEEEEEEEEECCCEEEEEEEEEECEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA