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The map label for this gene is lemA [H]

Identifier: 29349620

GI number: 29349620

Start: 5549461

End: 5550042

Strand: Reverse

Name: lemA [H]

Synonym: BT_4212

Alternate gene names: 29349620

Gene position: 5550042-5549461 (Counterclockwise)

Preceding gene: 29349621

Following gene: 29349619

Centisome position: 88.65

GC content: 43.47

Gene sequence:

>582_bases
ATGAAAAAGTCAATTATCATCATTTTAGCCGTTGTGGCTATCCTTGTCATATGGGTAGTCAGTGTATATAACGGTCTTGT
CACCATGGATGAGAATGTTAGCGGACAATGGGCCAATGTAGAAACCCAATACCAACGTCGCGCAGACCTGATACCCAATC
TTGTAAACACCGTAAAGGGATATGCTTCTCATGAAAAAGAGACATTGGAAGGAGTGGTAGAAGCACGTAGCAAAGCCACA
CAGATCAAAGTGGATGCCGAAGGTCTGACTCCGGAAAAGCTGGCAGAATATCAAAAAGCACAGGGTGCTGTAACGTCTGC
ACTTGGCAAATTATTGGCTATCACAGAGAATTATCCTGACTTGAAAGCCAATCAGAATTTCCTTGAATTACAGGCACAGC
TGGAAGGTACCGAAAACCGTATCAATGTAGCCCGTAAAAACTTCAATGATGCGGCACAATCGTACAACACCAATATCCGC
CGTTTCCCGAAAAACATATTTGCAGGGATGTTCGGATTCGACAAGAAAGCATACTTTGAAGCGGAAGAAGGAAGCGAAAA
AGCTCCGAAAGTAGAGTTCTAA

Upstream 100 bases:

>100_bases
GCTTCGGTGGAGGAATGGGAGGCGGCGGTGGAGCCGGTTCACGATTCTGATCCCTACAGATAATATTAAATAATCAAATA
CTCATCAAAAAGTAAGAAAC

Downstream 100 bases:

>100_bases
AGGATGATTTCTTAAAGAACTTCCAAGCTAAAATCGGAATCGCCGTTACCTGATTTATTCAGATAACGGCGATTCCAGCT
CTTAACCACCACGAAAGGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 193; Mature: 193

Protein sequence:

>193_residues
MKKSIIIILAVVAILVIWVVSVYNGLVTMDENVSGQWANVETQYQRRADLIPNLVNTVKGYASHEKETLEGVVEARSKAT
QIKVDAEGLTPEKLAEYQKAQGAVTSALGKLLAITENYPDLKANQNFLELQAQLEGTENRINVARKNFNDAAQSYNTNIR
RFPKNIFAGMFGFDKKAYFEAEEGSEKAPKVEF

Sequences:

>Translated_193_residues
MKKSIIIILAVVAILVIWVVSVYNGLVTMDENVSGQWANVETQYQRRADLIPNLVNTVKGYASHEKETLEGVVEARSKAT
QIKVDAEGLTPEKLAEYQKAQGAVTSALGKLLAITENYPDLKANQNFLELQAQLEGTENRINVARKNFNDAAQSYNTNIR
RFPKNIFAGMFGFDKKAYFEAEEGSEKAPKVEF
>Mature_193_residues
MKKSIIIILAVVAILVIWVVSVYNGLVTMDENVSGQWANVETQYQRRADLIPNLVNTVKGYASHEKETLEGVVEARSKAT
QIKVDAEGLTPEKLAEYQKAQGAVTSALGKLLAITENYPDLKANQNFLELQAQLEGTENRINVARKNFNDAAQSYNTNIR
RFPKNIFAGMFGFDKKAYFEAEEGSEKAPKVEF

Specific function: Unknown

COG id: COG1704

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LemA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007156 [H]

Pfam domain/function: PF04011 LemA [H]

EC number: NA

Molecular weight: Translated: 21518; Mature: 21518

Theoretical pI: Translated: 6.03; Mature: 6.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKSIIIILAVVAILVIWVVSVYNGLVTMDENVSGQWANVETQYQRRADLIPNLVNTVKG
CCCHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
YASHEKETLEGVVEARSKATQIKVDAEGLTPEKLAEYQKAQGAVTSALGKLLAITENYPD
HHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
LKANQNFLELQAQLEGTENRINVARKNFNDAAQSYNTNIRRFPKNIFAGMFGFDKKAYFE
CCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHEEC
AEEGSEKAPKVEF
CCCCCCCCCCCCC
>Mature Secondary Structure
MKKSIIIILAVVAILVIWVVSVYNGLVTMDENVSGQWANVETQYQRRADLIPNLVNTVKG
CCCHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
YASHEKETLEGVVEARSKATQIKVDAEGLTPEKLAEYQKAQGAVTSALGKLLAITENYPD
HHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
LKANQNFLELQAQLEGTENRINVARKNFNDAAQSYNTNIRRFPKNIFAGMFGFDKKAYFE
CCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHEEC
AEEGSEKAPKVEF
CCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11860552 [H]