| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
Click here to switch to the map view.
The map label for this gene is ygcG [C]
Identifier: 29349621
GI number: 29349621
Start: 5550093
End: 5550995
Strand: Reverse
Name: ygcG [C]
Synonym: BT_4213
Alternate gene names: 29349621
Gene position: 5550995-5550093 (Counterclockwise)
Preceding gene: 29349622
Following gene: 29349620
Centisome position: 88.67
GC content: 47.73
Gene sequence:
>903_bases ATGAAATCAATATTGACGCTTATACTTGCTACTTTTCTACTGATTCCACTGCAAGCCCAAGAAAAGGTATATACGGTAGA CAACTTGCCAAAAGTACATCTGCAAAATAAAATGCAGTATGTATGCAATCCGGCAGGGATACTTTCGCAAGCTGCTTGTG ACACAATAGACACTATGCTCCACGCTCTGGAACAACAGACGGGGATTGAAACGGTAGTTGCCATAGTTCCTTCGATTGGT GATATGGAGTGTTTTGATTTTTGCCATCAGCTGCTCAATCAATGGGGAGTAGGCAAGAAAGGAAAAGATAACGGACTCGT TATCCTGTTAGTCACCGACCAACGCTGCATCCAGTTTTACACCGGATACGGTTTGGAAGGGGTACTTCCCGATGCAATAT GCAAACGTATCCAGACTAAGTACATGATTCCATATCTGAAAGACGGCAACTGGAATGAAGGAATGGTAGCCGGAATCCGG GCGACTTGCCAGCGACTTGACGGATCAATGGAAAATGAATCGCTTTCTGAATCGAATAATGAATCGATGGATTTCATTTT CGCTGTTATCCTGTTCGCTGTAATCGGTGTAGGGATAGCGTTCTTTGCCGCAAGAAATCAGAGCCGTTGCCCCAAATGCG GGAAACATGCCCTGCAAAGAACCGGAAGCAGACTTGTATCACGTGTCAATGGGGTAAAGACGGAAGATGTCACCTATACT TGCAAGAACTGCGGAAATACAATCATACGTCGTCAGCAAAGCTACGATAGCGACTATCACAACAGAGGGGGTGGCGGAGG CGGTCCGTTCATCGGCGGATTCGGAGGCAGTGGCGGAGGCTTTAGCGGAGGCAGCTTCGGTGGAGGAATGGGAGGCGGCG GTGGAGCCGGTTCACGATTCTGA
Upstream 100 bases:
>100_bases GGATTTCGTCGGGCGGTATATTCATTAAACCTATTATAACAAGGAGTTTTGGAATCATAACAGAAAAAGTTTCTATATTT GCAAATGTAAAATGATTGTT
Downstream 100 bases:
>100_bases TCCCTACAGATAATATTAAATAATCAAATACTCATCAAAAAGTAAGAAACATGAAAAAGTCAATTATCATCATTTTAGCC GTTGTGGCTATCCTTGTCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 300; Mature: 300
Protein sequence:
>300_residues MKSILTLILATFLLIPLQAQEKVYTVDNLPKVHLQNKMQYVCNPAGILSQAACDTIDTMLHALEQQTGIETVVAIVPSIG DMECFDFCHQLLNQWGVGKKGKDNGLVILLVTDQRCIQFYTGYGLEGVLPDAICKRIQTKYMIPYLKDGNWNEGMVAGIR ATCQRLDGSMENESLSESNNESMDFIFAVILFAVIGVGIAFFAARNQSRCPKCGKHALQRTGSRLVSRVNGVKTEDVTYT CKNCGNTIIRRQQSYDSDYHNRGGGGGGPFIGGFGGSGGGFSGGSFGGGMGGGGGAGSRF
Sequences:
>Translated_300_residues MKSILTLILATFLLIPLQAQEKVYTVDNLPKVHLQNKMQYVCNPAGILSQAACDTIDTMLHALEQQTGIETVVAIVPSIG DMECFDFCHQLLNQWGVGKKGKDNGLVILLVTDQRCIQFYTGYGLEGVLPDAICKRIQTKYMIPYLKDGNWNEGMVAGIR ATCQRLDGSMENESLSESNNESMDFIFAVILFAVIGVGIAFFAARNQSRCPKCGKHALQRTGSRLVSRVNGVKTEDVTYT CKNCGNTIIRRQQSYDSDYHNRGGGGGGPFIGGFGGSGGGFSGGSFGGGMGGGGGAGSRF >Mature_300_residues MKSILTLILATFLLIPLQAQEKVYTVDNLPKVHLQNKMQYVCNPAGILSQAACDTIDTMLHALEQQTGIETVVAIVPSIG DMECFDFCHQLLNQWGVGKKGKDNGLVILLVTDQRCIQFYTGYGLEGVLPDAICKRIQTKYMIPYLKDGNWNEGMVAGIR ATCQRLDGSMENESLSESNNESMDFIFAVILFAVIGVGIAFFAARNQSRCPKCGKHALQRTGSRLVSRVNGVKTEDVTYT CKNCGNTIIRRQQSYDSDYHNRGGGGGGPFIGGFGGSGGGFSGGSFGGGMGGGGGAGSRF
Specific function: Unknown
COG id: COG1512
COG function: function code R; Beta-propeller domains of methanol dehydrogenase type
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32236; Mature: 32236
Theoretical pI: Translated: 7.85; Mature: 7.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSILTLILATFLLIPLQAQEKVYTVDNLPKVHLQNKMQYVCNPAGILSQAACDTIDTML CHHHHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH HALEQQTGIETVVAIVPSIGDMECFDFCHQLLNQWGVGKKGKDNGLVILLVTDQRCIQFY HHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCHHHHHHH TGYGLEGVLPDAICKRIQTKYMIPYLKDGNWNEGMVAGIRATCQRLDGSMENESLSESNN HCCCCCCCCHHHHHHHHHHHHCCCEECCCCCCCHHHHHHHHHHHHHCCCCCCHHHCCCCC ESMDFIFAVILFAVIGVGIAFFAARNQSRCPKCGKHALQRTGSRLVSRVNGVKTEDVTYT CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEE CKNCGNTIIRRQQSYDSDYHNRGGGGGGPFIGGFGGSGGGFSGGSFGGGMGGGGGAGSRF HHHHCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKSILTLILATFLLIPLQAQEKVYTVDNLPKVHLQNKMQYVCNPAGILSQAACDTIDTML CHHHHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH HALEQQTGIETVVAIVPSIGDMECFDFCHQLLNQWGVGKKGKDNGLVILLVTDQRCIQFY HHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCHHHHHHH TGYGLEGVLPDAICKRIQTKYMIPYLKDGNWNEGMVAGIRATCQRLDGSMENESLSESNN HCCCCCCCCHHHHHHHHHHHHCCCEECCCCCCCHHHHHHHHHHHHHCCCCCCHHHCCCCC ESMDFIFAVILFAVIGVGIAFFAARNQSRCPKCGKHALQRTGSRLVSRVNGVKTEDVTYT CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEE CKNCGNTIIRRQQSYDSDYHNRGGGGGGPFIGGFGGSGGGFSGGSFGGGMGGGGGAGSRF HHHHCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA