Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29349542

Identifier: 29349542

GI number: 29349542

Start: 5421598

End: 5423520

Strand: Reverse

Name: 29349542

Synonym: BT_4134

Alternate gene names: NA

Gene position: 5423520-5421598 (Counterclockwise)

Preceding gene: 29349543

Following gene: 29349541

Centisome position: 86.63

GC content: 41.34

Gene sequence:

>1923_bases
ATGAAAAAAATTATAGTATCCATATCATTTATTCTTACGGCTATACTATGCAATACATCTTGCAGTGATTACTTGGATAT
AGTGCCCGAAGGTACCCCGGACATGGAAACAGCCTTCAGCAACAAGACAAATGCCCGTAAGTTTCTTTTTACTTGTTATA
GTTACCTGCCAAAGTGGGATCAAGCCGGTTCCATCGGCTTTCTAGCAGGTGATGAACATTGGTTAATACCCAAAGGTACC
GGATTTATAGATCAACGCCTCAGTCTCAACGCTTGGGAAATCGGTCGTGGAGAACAGAACAGTAATGACCCTTATCAGAA
TTATTGGGATGGCCTTAATGGAGGAACAAATCTTTGGACTGCTATACGCGACTGCAATATCTTTCTTGAAAATATTGACA
AGCCTCTAGATTTACAGCAATATGAACGTAACAGATGGATTGCGGAAGTAAAATTCCTCAAAGCATACTACCACTATTAT
CTATTTATGCTCTATGGTCCTATCCCTATCATGGATAACAACATTTCGATAGATGCATCTGCGGAAGAGGTACGACGTTA
CCGGGACCCAGTGGACGATGTAGTCAACTATATTTCCAATCTACTGGATGACGCAGCTAAAGATCTGCCTCTTCAAGTCA
CTGATGCAGGTGAAGAACTGGGACGAATCACCCAACCAATAGCAAAAGCGGTAAAAGCACAATTGTGGTTATTGGCTGCT
AGTCCTCTATTCAATGGAAATACCGATTATATCAACGTAAAAGATAATCAAGGAAGAAGTCTTTTTCCCTCTGAAACAGA
TAATAACAAATGGAAACAGGCTGCAGACGCAGCTTTAGACGCCATAAAGTGCGCCAAAGAAGCCGGACATGACCTTTACT
ATTTCACTCTGCCCGTTAACGGACTTTCGGATGCTACACGCAAGTTACTTGATATCGGTGAAGCAGTTACAGAGAAATGG
AATACGGAAATTATATGGGGAAGTACATGGAACGTCAACGGATTACAAAAGGTAGCAGTAGCCAAAACAACTAAGGGCAG
TCACTACGATGCAATATCTGTAATGGCTCCGACCTTAACTGTTGCCGAACAGTTTTATTCCTCTAACGGTGTTCCCATCT
CCGAAGATAAAGGAGACTTTTGGTCGAAAAACTACCCAAATCGGTATGATTTCACTATCATTCCTGATGAAGGAAATAAT
AAGCATTATCTCAAAATCGGTGAAGAAACGGCGTATCTTCACCTCAACCGAGAGCCACGCTTTTATGCTAACCTATCATT
CGATCGTGGAACATGGTACGGCTACGGTTATGCCAGTGATGAACCGAAAGATCTGGCTTTCTATAAATTTCGCGCTAAAG
AAGTTTCTGGTCGTATTACTTCCGAAGACTATTCATATACTGGATATTTAAACAAAAAAGTATGTAGCTATAAAACTAGT
GTGACTGATAACGGTCTGTCAACGGAACGTTATGCATTTCCGATTATTCGTCTTGCTGATCTGTATCTGATGTATGCGGA
AGCACTGAATGAAACGCTCAACACCCCTAACAACGATGTTTATACCTATATTGACTTAGTGCGTGAGCGCGCTGGTCTTG
ACGGAGTAAAGGAATCCTGGCAAAAATATTCAAAGTATCCTGAAAAGCCAAACACGAAAACAGGTATGCGTGAAATCATT
CGTATGGAACGCTTAAATGAACTAGCTTGTGAAGGAAAACGCTTTTGGGATTTACGTCGTTGGAAGAAGGAACTTCCTCG
TGAAGTGAAGGGGTGGTATGTACAAGGAGAAACAGCACAAGAATTTTACCGTGTCACTACGCTTTATCTACGTTCGAGAT
ACAGTTTTAAAGATTACTTGTGGCCCTTAAAAGTAGAAACTGTATTGAAAGATCCGAACCTGGGACAGAATCCGGGTTGG
TAA

Upstream 100 bases:

>100_bases
TTTAAAACATGGGATACGGAAATGGGAGGCAATGGTCTTGGATATCCCGTTCAACGTGTATTTAATATAGGTGTTCAACT
TTCACTCTAAAATTTGCTAT

Downstream 100 bases:

>100_bases
TCACCGTATTCATGTTATAAAAAACTGGAAAGATGAAAAAAATAAATTATATATTAAAGCTGACAAAATATATGTCTGCG
ACTTTAATTGGTATACTGTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 640; Mature: 640

Protein sequence:

>640_residues
MKKIIVSISFILTAILCNTSCSDYLDIVPEGTPDMETAFSNKTNARKFLFTCYSYLPKWDQAGSIGFLAGDEHWLIPKGT
GFIDQRLSLNAWEIGRGEQNSNDPYQNYWDGLNGGTNLWTAIRDCNIFLENIDKPLDLQQYERNRWIAEVKFLKAYYHYY
LFMLYGPIPIMDNNISIDASAEEVRRYRDPVDDVVNYISNLLDDAAKDLPLQVTDAGEELGRITQPIAKAVKAQLWLLAA
SPLFNGNTDYINVKDNQGRSLFPSETDNNKWKQAADAALDAIKCAKEAGHDLYYFTLPVNGLSDATRKLLDIGEAVTEKW
NTEIIWGSTWNVNGLQKVAVAKTTKGSHYDAISVMAPTLTVAEQFYSSNGVPISEDKGDFWSKNYPNRYDFTIIPDEGNN
KHYLKIGEETAYLHLNREPRFYANLSFDRGTWYGYGYASDEPKDLAFYKFRAKEVSGRITSEDYSYTGYLNKKVCSYKTS
VTDNGLSTERYAFPIIRLADLYLMYAEALNETLNTPNNDVYTYIDLVRERAGLDGVKESWQKYSKYPEKPNTKTGMREII
RMERLNELACEGKRFWDLRRWKKELPREVKGWYVQGETAQEFYRVTTLYLRSRYSFKDYLWPLKVETVLKDPNLGQNPGW

Sequences:

>Translated_640_residues
MKKIIVSISFILTAILCNTSCSDYLDIVPEGTPDMETAFSNKTNARKFLFTCYSYLPKWDQAGSIGFLAGDEHWLIPKGT
GFIDQRLSLNAWEIGRGEQNSNDPYQNYWDGLNGGTNLWTAIRDCNIFLENIDKPLDLQQYERNRWIAEVKFLKAYYHYY
LFMLYGPIPIMDNNISIDASAEEVRRYRDPVDDVVNYISNLLDDAAKDLPLQVTDAGEELGRITQPIAKAVKAQLWLLAA
SPLFNGNTDYINVKDNQGRSLFPSETDNNKWKQAADAALDAIKCAKEAGHDLYYFTLPVNGLSDATRKLLDIGEAVTEKW
NTEIIWGSTWNVNGLQKVAVAKTTKGSHYDAISVMAPTLTVAEQFYSSNGVPISEDKGDFWSKNYPNRYDFTIIPDEGNN
KHYLKIGEETAYLHLNREPRFYANLSFDRGTWYGYGYASDEPKDLAFYKFRAKEVSGRITSEDYSYTGYLNKKVCSYKTS
VTDNGLSTERYAFPIIRLADLYLMYAEALNETLNTPNNDVYTYIDLVRERAGLDGVKESWQKYSKYPEKPNTKTGMREII
RMERLNELACEGKRFWDLRRWKKELPREVKGWYVQGETAQEFYRVTTLYLRSRYSFKDYLWPLKVETVLKDPNLGQNPGW
>Mature_640_residues
MKKIIVSISFILTAILCNTSCSDYLDIVPEGTPDMETAFSNKTNARKFLFTCYSYLPKWDQAGSIGFLAGDEHWLIPKGT
GFIDQRLSLNAWEIGRGEQNSNDPYQNYWDGLNGGTNLWTAIRDCNIFLENIDKPLDLQQYERNRWIAEVKFLKAYYHYY
LFMLYGPIPIMDNNISIDASAEEVRRYRDPVDDVVNYISNLLDDAAKDLPLQVTDAGEELGRITQPIAKAVKAQLWLLAA
SPLFNGNTDYINVKDNQGRSLFPSETDNNKWKQAADAALDAIKCAKEAGHDLYYFTLPVNGLSDATRKLLDIGEAVTEKW
NTEIIWGSTWNVNGLQKVAVAKTTKGSHYDAISVMAPTLTVAEQFYSSNGVPISEDKGDFWSKNYPNRYDFTIIPDEGNN
KHYLKIGEETAYLHLNREPRFYANLSFDRGTWYGYGYASDEPKDLAFYKFRAKEVSGRITSEDYSYTGYLNKKVCSYKTS
VTDNGLSTERYAFPIIRLADLYLMYAEALNETLNTPNNDVYTYIDLVRERAGLDGVKESWQKYSKYPEKPNTKTGMREII
RMERLNELACEGKRFWDLRRWKKELPREVKGWYVQGETAQEFYRVTTLYLRSRYSFKDYLWPLKVETVLKDPNLGQNPGW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 73676; Mature: 73676

Theoretical pI: Translated: 5.28; Mature: 5.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIIVSISFILTAILCNTSCSDYLDIVPEGTPDMETAFSNKTNARKFLFTCYSYLPKWD
CCEEEEEHHHHHHHHHHCCCCHHHHHCCCCCCCCHHHHHCCCCCHHHHHHHHHHHCCCCC
QAGSIGFLAGDEHWLIPKGTGFIDQRLSLNAWEIGRGEQNSNDPYQNYWDGLNGGTNLWT
CCCCEEEEECCCEEEEECCCCCHHHCCCCCEEECCCCCCCCCCCHHHHHCCCCCCCHHHH
AIRDCNIFLENIDKPLDLQQYERNRWIAEVKFLKAYYHYYLFMLYGPIPIMDNNISIDAS
HHHHHHHHHHHCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCEEECCCEEECCC
AEEVRRYRDPVDDVVNYISNLLDDAAKDLPLQVTDAGEELGRITQPIAKAVKAQLWLLAA
HHHHHHHHCCHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHEEEEE
SPLFNGNTDYINVKDNQGRSLFPSETDNNKWKQAADAALDAIKCAKEAGHDLYYFTLPVN
CCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEECC
GLSDATRKLLDIGEAVTEKWNTEIIWGSTWNVNGLQKVAVAKTTKGSHYDAISVMAPTLT
CCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHEEEEEECCCCCCCCCHHHHHHHHH
VAEQFYSSNGVPISEDKGDFWSKNYPNRYDFTIIPDEGNNKHYLKIGEETAYLHLNREPR
HHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEECCCEEEEEECCCCC
FYANLSFDRGTWYGYGYASDEPKDLAFYKFRAKEVSGRITSEDYSYTGYLNKKVCSYKTS
EEEEEEECCCCEEECCCCCCCCCCEEEEEEEHHHHCCCCCCCCCCEECCCCCHHHHEECC
VTDNGLSTERYAFPIIRLADLYLMYAEALNETLNTPNNDVYTYIDLVRERAGLDGVKESW
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHH
QKYSKYPEKPNTKTGMREIIRMERLNELACEGKRFWDLRRWKKELPREVKGWYVQGETAQ
HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHCCEEEECCHHH
EFYRVTTLYLRSRYSFKDYLWPLKVETVLKDPNLGQNPGW
HHHHHHHHHHHHCCCHHHCCCCEEEEEEECCCCCCCCCCC
>Mature Secondary Structure
MKKIIVSISFILTAILCNTSCSDYLDIVPEGTPDMETAFSNKTNARKFLFTCYSYLPKWD
CCEEEEEHHHHHHHHHHCCCCHHHHHCCCCCCCCHHHHHCCCCCHHHHHHHHHHHCCCCC
QAGSIGFLAGDEHWLIPKGTGFIDQRLSLNAWEIGRGEQNSNDPYQNYWDGLNGGTNLWT
CCCCEEEEECCCEEEEECCCCCHHHCCCCCEEECCCCCCCCCCCHHHHHCCCCCCCHHHH
AIRDCNIFLENIDKPLDLQQYERNRWIAEVKFLKAYYHYYLFMLYGPIPIMDNNISIDAS
HHHHHHHHHHHCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCEEECCCEEECCC
AEEVRRYRDPVDDVVNYISNLLDDAAKDLPLQVTDAGEELGRITQPIAKAVKAQLWLLAA
HHHHHHHHCCHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHEEEEE
SPLFNGNTDYINVKDNQGRSLFPSETDNNKWKQAADAALDAIKCAKEAGHDLYYFTLPVN
CCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEECC
GLSDATRKLLDIGEAVTEKWNTEIIWGSTWNVNGLQKVAVAKTTKGSHYDAISVMAPTLT
CCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHEEEEEECCCCCCCCCHHHHHHHHH
VAEQFYSSNGVPISEDKGDFWSKNYPNRYDFTIIPDEGNNKHYLKIGEETAYLHLNREPR
HHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEECCCEEEEEECCCCC
FYANLSFDRGTWYGYGYASDEPKDLAFYKFRAKEVSGRITSEDYSYTGYLNKKVCSYKTS
EEEEEEECCCCEEECCCCCCCCCCEEEEEEEHHHHCCCCCCCCCCEECCCCCHHHHEECC
VTDNGLSTERYAFPIIRLADLYLMYAEALNETLNTPNNDVYTYIDLVRERAGLDGVKESW
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHH
QKYSKYPEKPNTKTGMREIIRMERLNELACEGKRFWDLRRWKKELPREVKGWYVQGETAQ
HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHCCEEEECCHHH
EFYRVTTLYLRSRYSFKDYLWPLKVETVLKDPNLGQNPGW
HHHHHHHHHHHHCCCHHHCCCCEEEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA