Click here to switch to the map view.

The map label for this gene is soj [H]

Identifier: 29349410

GI number: 29349410

Start: 5214894

End: 5215841

Strand: Reverse

Name: soj [H]

Synonym: BT_4002

Alternate gene names: 29349410

Gene position: 5215841-5214894 (Counterclockwise)

Preceding gene: 29349414

Following gene: 29349409

Centisome position: 83.32

GC content: 43.46

Gene sequence:

>948_bases
ATGTATATTTGCAAGCTCAAACAGAGAAAGTATGATGATAAAATCAACCAGGTTTCGGAACTGTTTCGTCCGGCAGTTAT
TAACAAAACCGGTGACTTATCAACAGAAAATGCAAAGTTTCTCTTTTTTCGTAGGCGCTCTAAGGAATTATCACTTATTT
CGCTGCCAATAAATTTAGAGTATATGGGAAAAATAATTGCTTTGGCCAATCAAAAAGGGGGTGTAGGAAAGACCACGACT
ACGATTAATCTCGCAGCGTCACTTGCTACACTTGAAAAGAAAGTACTCGTGGTAGATGCAGACCCGCAAGCAAATGCCTC
TTCCGGCCTGGGAGTGGACATCAAGCAGTCGGAATGCACTATCTATGAATGCATTATTGACAGAGCCAATGTACAGGACG
CTATTCTTGACACAGAAATCGACTCTTTGAAAGTGATCTCTTCGCACATCAATCTTGTAGGAGCAGAGATTGAAATGCTG
AACCTCCCAAACCGCGAAAAGATACTGAAAGAAGTGCTCACACCCTTGAAGAAAGAATATGACTATATTCTGATAGATTG
TTCTCCTTCACTCGGACTGATTACCATCAATGCCCTGACGGCAGCCGACTCCGTGATCATCCCCGTGCAAGCTGAGTATT
TTGCTCTCGAAGGCATCAGCAAACTGCTGAATACGATTAAAATCATCAAGTCGAAACTGAATCCCGCTCTGGAAATCGAA
GGTTTCCTGCTGACGATGTATGACTCACGTCTGCGTCAGGCAAACCAGATTTACGACGAAGTGAAAAGACACTTCCAGGA
ATTAGTTTTCAACAGCGTGATCCAGCGAAATGTGAAACTGAGCGAGGCTCCCAGCTACGGTATCCCGACCATTCTTTATG
ATGCGGACTCTACCGGTGCCAAAAACCATCTCGCCCTTGCCAAAGAGATTATCAACAGAAATAAATAA

Upstream 100 bases:

>100_bases
TATCACATTAATCACATCGCTATCTGACGAATATACACCCGTTTACAAATCTTAATCTTCTGCAAGCGAGTAAAAAAAGA
AATAGATATCCAATATAAAT

Downstream 100 bases:

>100_bases
CCGAAGAAGATATGGCAACACAAAAAAGAAATGCATTAGGACGCGGACTTGACGCCCTGCTCTCAATGGATGATGTGAAA
ACCGAAGGTTCTTCTTCCAT

Product: ParaA family ATPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 315; Mature: 315

Protein sequence:

>315_residues
MYICKLKQRKYDDKINQVSELFRPAVINKTGDLSTENAKFLFFRRRSKELSLISLPINLEYMGKIIALANQKGGVGKTTT
TINLAASLATLEKKVLVVDADPQANASSGLGVDIKQSECTIYECIIDRANVQDAILDTEIDSLKVISSHINLVGAEIEML
NLPNREKILKEVLTPLKKEYDYILIDCSPSLGLITINALTAADSVIIPVQAEYFALEGISKLLNTIKIIKSKLNPALEIE
GFLLTMYDSRLRQANQIYDEVKRHFQELVFNSVIQRNVKLSEAPSYGIPTILYDADSTGAKNHLALAKEIINRNK

Sequences:

>Translated_315_residues
MYICKLKQRKYDDKINQVSELFRPAVINKTGDLSTENAKFLFFRRRSKELSLISLPINLEYMGKIIALANQKGGVGKTTT
TINLAASLATLEKKVLVVDADPQANASSGLGVDIKQSECTIYECIIDRANVQDAILDTEIDSLKVISSHINLVGAEIEML
NLPNREKILKEVLTPLKKEYDYILIDCSPSLGLITINALTAADSVIIPVQAEYFALEGISKLLNTIKIIKSKLNPALEIE
GFLLTMYDSRLRQANQIYDEVKRHFQELVFNSVIQRNVKLSEAPSYGIPTILYDADSTGAKNHLALAKEIINRNK
>Mature_315_residues
MYICKLKQRKYDDKINQVSELFRPAVINKTGDLSTENAKFLFFRRRSKELSLISLPINLEYMGKIIALANQKGGVGKTTT
TINLAASLATLEKKVLVVDADPQANASSGLGVDIKQSECTIYECIIDRANVQDAILDTEIDSLKVISSHINLVGAEIEML
NLPNREKILKEVLTPLKKEYDYILIDCSPSLGLITINALTAADSVIIPVQAEYFALEGISKLLNTIKIIKSKLNPALEIE
GFLLTMYDSRLRQANQIYDEVKRHFQELVFNSVIQRNVKLSEAPSYGIPTILYDADSTGAKNHLALAKEIINRNK

Specific function: Inhibits the initiation of sporulation, spo0J antagonizes this inhibition. Soj ultimately inhibits the activation (phosphorylation) of spo0A. It is not required for chromosome partitioning [H]

COG id: COG1192

COG function: function code D; ATPases involved in chromosome partitioning

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002586
- InterPro:   IPR000392 [H]

Pfam domain/function: PF01656 CbiA [H]

EC number: NA

Molecular weight: Translated: 35116; Mature: 35116

Theoretical pI: Translated: 7.92; Mature: 7.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYICKLKQRKYDDKINQVSELFRPAVINKTGDLSTENAKFLFFRRRSKELSLISLPINLE
CEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCEEEEEECCCHH
YMGKIIALANQKGGVGKTTTTINLAASLATLEKKVLVVDADPQANASSGLGVDIKQSECT
HHHHEEEEECCCCCCCCCEEEEEHHHHHHHHCEEEEEEECCCCCCCCCCCCEEEECCCCC
IYECIIDRANVQDAILDTEIDSLKVISSHINLVGAEIEMLNLPNREKILKEVLTPLKKEY
CEEHHHCCCCCHHHHHHCCHHHHHHHHHHHHEEECEEEEECCCCHHHHHHHHHHHHHHCC
DYILIDCSPSLGLITINALTAADSVIIPVQAEYFALEGISKLLNTIKIIKSKLNPALEIE
CEEEEECCCCCCEEEEEEECCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEC
GFLLTMYDSRLRQANQIYDEVKRHFQELVFNSVIQRNVKLSEAPSYGIPTILYDADSTGA
EEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCC
KNHLALAKEIINRNK
HHHHHHHHHHHHCCC
>Mature Secondary Structure
MYICKLKQRKYDDKINQVSELFRPAVINKTGDLSTENAKFLFFRRRSKELSLISLPINLE
CEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCEEEEEECCCHH
YMGKIIALANQKGGVGKTTTTINLAASLATLEKKVLVVDADPQANASSGLGVDIKQSECT
HHHHEEEEECCCCCCCCCEEEEEHHHHHHHHCEEEEEEECCCCCCCCCCCCEEEECCCCC
IYECIIDRANVQDAILDTEIDSLKVISSHINLVGAEIEMLNLPNREKILKEVLTPLKKEY
CEEHHHCCCCCHHHHHHCCHHHHHHHHHHHHEEECEEEEECCCCHHHHHHHHHHHHHHCC
DYILIDCSPSLGLITINALTAADSVIIPVQAEYFALEGISKLLNTIKIIKSKLNPALEIE
CEEEEECCCCCCEEEEEEECCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEC
GFLLTMYDSRLRQANQIYDEVKRHFQELVFNSVIQRNVKLSEAPSYGIPTILYDADSTGA
EEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCC
KNHLALAKEIINRNK
HHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1552862; 7584024; 9384377; 8071208 [H]