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The map label for this gene is parB [H]

Identifier: 29349409

GI number: 29349409

Start: 5213992

End: 5214882

Strand: Reverse

Name: parB [H]

Synonym: BT_4001

Alternate gene names: 29349409

Gene position: 5214882-5213992 (Counterclockwise)

Preceding gene: 29349410

Following gene: 29349408

Centisome position: 83.3

GC content: 46.8

Gene sequence:

>891_bases
ATGGCAACACAAAAAAGAAATGCATTAGGACGCGGACTTGACGCCCTGCTCTCAATGGATGATGTGAAAACCGAAGGTTC
TTCTTCCATTAGTGAAATAGAGTTGGCGAAGATTACCGTCAACCCCAATCAGCCACGCCGCGAATTCGATCAAACGGCAT
TGCAGGAACTGGCTGATTCCATTGCGGAAATCGGTATCATACAGCCTATCACTCTACGCAAGCTCTCGGACGATGAGTAT
CAGATCATCGCGGGAGAGCGTCGTTACCGTGCTTCACAAAAAGCAGGACTGAAAACCATCCCTGCCTACATCCGCACTGC
CGACGACGAAAACATGATGGAAATGGCGCTGATTGAAAACATACAGCGTGAAGACCTGAATGCGGTAGAAATAGCATTGG
CTTATCAACATCTGCTGGACCAGTATGAACTGACACAGGAACGCCTGAGCGAACGTATCGGCAAGAACCGGACCACTATC
GCCAACTACCTGCGTCTGCTGAAACTGCCGGCTCCTATACAGATGGCTCTACAAAACAAACAGCTAGATATGGGACATGC
ACGTGCATTGATTTCATTAGGCGACCCCAAACTTCAAGTAAAAATATTCGAAGAGATACAGGAACACGGATACTCCGTCC
GCAAAGTAGAAGAGATTGTCAAATCGCTGAGCGAAGGAGAAGCTGTGAAAAGCGGCACACGGAAAATCACTCCGAAACGC
AGCAAACTACCGGAAGAGTTTAATTTACTAAAGCAACAACTCACGGGATTTTTCAACACCAAGGTACAACTGACTTGCTC
CGAAAAGGGGAAAGGAAAAATCAGTATTCCTTTCAGCAACGAGGAGGAACTGGAACGTATCATGGAAATCTTCGATACGC
TAAAAAAGTAG

Upstream 100 bases:

>100_bases
GTATCCCGACCATTCTTTATGATGCGGACTCTACCGGTGCCAAAAACCATCTCGCCCTTGCCAAAGAGATTATCAACAGA
AATAAATAACCGAAGAAGAT

Downstream 100 bases:

>100_bases
ATGACAAGAAAAAGTAAGAAATATCAGTTACCCATCATCACCCTGCTTCTCTGTTTTCTACAGGTGGCAGGGATTGATGT
GTATGCACAAGAACCTGTGA

Product: putative chromosome partitioning protein parB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 296; Mature: 295

Protein sequence:

>296_residues
MATQKRNALGRGLDALLSMDDVKTEGSSSISEIELAKITVNPNQPRREFDQTALQELADSIAEIGIIQPITLRKLSDDEY
QIIAGERRYRASQKAGLKTIPAYIRTADDENMMEMALIENIQREDLNAVEIALAYQHLLDQYELTQERLSERIGKNRTTI
ANYLRLLKLPAPIQMALQNKQLDMGHARALISLGDPKLQVKIFEEIQEHGYSVRKVEEIVKSLSEGEAVKSGTRKITPKR
SKLPEEFNLLKQQLTGFFNTKVQLTCSEKGKGKISIPFSNEEELERIMEIFDTLKK

Sequences:

>Translated_296_residues
MATQKRNALGRGLDALLSMDDVKTEGSSSISEIELAKITVNPNQPRREFDQTALQELADSIAEIGIIQPITLRKLSDDEY
QIIAGERRYRASQKAGLKTIPAYIRTADDENMMEMALIENIQREDLNAVEIALAYQHLLDQYELTQERLSERIGKNRTTI
ANYLRLLKLPAPIQMALQNKQLDMGHARALISLGDPKLQVKIFEEIQEHGYSVRKVEEIVKSLSEGEAVKSGTRKITPKR
SKLPEEFNLLKQQLTGFFNTKVQLTCSEKGKGKISIPFSNEEELERIMEIFDTLKK
>Mature_295_residues
ATQKRNALGRGLDALLSMDDVKTEGSSSISEIELAKITVNPNQPRREFDQTALQELADSIAEIGIIQPITLRKLSDDEYQ
IIAGERRYRASQKAGLKTIPAYIRTADDENMMEMALIENIQREDLNAVEIALAYQHLLDQYELTQERLSERIGKNRTTIA
NYLRLLKLPAPIQMALQNKQLDMGHARALISLGDPKLQVKIFEEIQEHGYSVRKVEEIVKSLSEGEAVKSGTRKITPKRS
KLPEEFNLLKQQLTGFFNTKVQLTCSEKGKGKISIPFSNEEELERIMEIFDTLKK

Specific function: Involved in chromosome partition. Localize to both poles of the predivisional cell following completion of DNA replication. Binds to the DNA origin of replication [H]

COG id: COG1475

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004437
- InterPro:   IPR003115
- InterPro:   IPR013741 [H]

Pfam domain/function: PF08535 KorB; PF02195 ParBc [H]

EC number: NA

Molecular weight: Translated: 33587; Mature: 33456

Theoretical pI: Translated: 6.33; Mature: 6.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATQKRNALGRGLDALLSMDDVKTEGSSSISEIELAKITVNPNQPRREFDQTALQELADS
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHH
IAEIGIIQPITLRKLSDDEYQIIAGERRYRASQKAGLKTIPAYIRTADDENMMEMALIEN
HHHCCCCCCHHHCCCCCCCEEEEECCHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHH
IQREDLNAVEIALAYQHLLDQYELTQERLSERIGKNRTTIANYLRLLKLPAPIQMALQNK
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHCC
QLDMGHARALISLGDPKLQVKIFEEIQEHGYSVRKVEEIVKSLSEGEAVKSGTRKITPKR
CCCCHHHHHHEECCCCCEEHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHCCCCCCCCCH
SKLPEEFNLLKQQLTGFFNTKVQLTCSEKGKGKISIPFSNEEELERIMEIFDTLKK
HCCCHHHHHHHHHHHHHHCCEEEEEECCCCCCEEECCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
ATQKRNALGRGLDALLSMDDVKTEGSSSISEIELAKITVNPNQPRREFDQTALQELADS
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHH
IAEIGIIQPITLRKLSDDEYQIIAGERRYRASQKAGLKTIPAYIRTADDENMMEMALIEN
HHHCCCCCCHHHCCCCCCCEEEEECCHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHH
IQREDLNAVEIALAYQHLLDQYELTQERLSERIGKNRTTIANYLRLLKLPAPIQMALQNK
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHCC
QLDMGHARALISLGDPKLQVKIFEEIQEHGYSVRKVEEIVKSLSEGEAVKSGTRKITPKR
CCCCHHHHHHEECCCCCEEHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHCCCCCCCCCH
SKLPEEFNLLKQQLTGFFNTKVQLTCSEKGKGKISIPFSNEEELERIMEIFDTLKK
HCCCHHHHHHHHHHHHHHCCEEEEEECCCCCCEEECCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12534463 [H]