Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29349350

Identifier: 29349350

GI number: 29349350

Start: 5118058

End: 5118495

Strand: Reverse

Name: 29349350

Synonym: BT_3942

Alternate gene names: NA

Gene position: 5118495-5118058 (Counterclockwise)

Preceding gene: 29349374

Following gene: 29349347

Centisome position: 81.76

GC content: 44.52

Gene sequence:

>438_bases
ATGGAAGAAATCGTATTTCATCATGCACTGCCTATCCAGTTGCGCTTCAACGACGTAGATAAATTCGGTCACGTCAACAA
CACTGTCTACTTTTCTTTCTATGACTTGGGGAAGACTGAATATTTCGCCTCCGTATGTCCGGGAGTGGACTGGGAAAAGA
TCGGCATAGTGGTCGTTCATATCGAAGCCAATTTTGTAAAGCAGATTTTCGCATCCGATCATATTGCCGTACAAACCGCC
GTTTCTGAAATTGGAACCAAAAGCTTTCATCTCATCCAACGGGTGATCGACACGGAAACCCTAGAGGTGAAATGTATCTG
CAAATCGATCATGGTAACTTTCGACCTGGAAAAACATGAGTCGATGCCGCTAACCGAAGACTGGATAGAGGCAATCTGCA
AATTCGAAGGGAAGGACGTACGCAAGAAGAAAAACTGA

Upstream 100 bases:

>100_bases
CTTTTTTAATATCTTCTATCATTTCTTGAACTATTTCTGTTGAGAATAACACGCAAAAGTAGTACTTTTGCGTCGAAATA
AAAAAGATTAAGGGAAAACA

Downstream 100 bases:

>100_bases
AAGAAATAAGCCTTCCCGGTGCCAGGACCATTCCTCATCGCTGCCTGACTTCGGAGAGCCAAAACCTGAGCGATAAGAAA
AGTTTTATACTGAATCATGT

Product: hypothetical protein

Products: NA

Alternate protein names: Thioesterase; Thioesterase Family Protein; 4-Hydroxybenzoyl-CoA Thioesterase

Number of amino acids: Translated: 145; Mature: 145

Protein sequence:

>145_residues
MEEIVFHHALPIQLRFNDVDKFGHVNNTVYFSFYDLGKTEYFASVCPGVDWEKIGIVVVHIEANFVKQIFASDHIAVQTA
VSEIGTKSFHLIQRVIDTETLEVKCICKSIMVTFDLEKHESMPLTEDWIEAICKFEGKDVRKKKN

Sequences:

>Translated_145_residues
MEEIVFHHALPIQLRFNDVDKFGHVNNTVYFSFYDLGKTEYFASVCPGVDWEKIGIVVVHIEANFVKQIFASDHIAVQTA
VSEIGTKSFHLIQRVIDTETLEVKCICKSIMVTFDLEKHESMPLTEDWIEAICKFEGKDVRKKKN
>Mature_145_residues
MEEIVFHHALPIQLRFNDVDKFGHVNNTVYFSFYDLGKTEYFASVCPGVDWEKIGIVVVHIEANFVKQIFASDHIAVQTA
VSEIGTKSFHLIQRVIDTETLEVKCICKSIMVTFDLEKHESMPLTEDWIEAICKFEGKDVRKKKN

Specific function: Unknown

COG id: COG0824

COG function: function code R; Predicted thioesterase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16709; Mature: 16709

Theoretical pI: Translated: 5.86; Mature: 5.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEEIVFHHALPIQLRFNDVDKFGHVNNTVYFSFYDLGKTEYFASVCPGVDWEKIGIVVVH
CCCEEEECCCEEEEEECCCCCCCCCCCEEEEEEEECCCHHHHHHHCCCCCCHHEEEEEEE
IEANFVKQIFASDHIAVQTAVSEIGTKSFHLIQRVIDTETLEVKCICKSIMVTFDLEKHE
ECHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHEEECCCCC
SMPLTEDWIEAICKFEGKDVRKKKN
CCCCCHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MEEIVFHHALPIQLRFNDVDKFGHVNNTVYFSFYDLGKTEYFASVCPGVDWEKIGIVVVH
CCCEEEECCCEEEEEECCCCCCCCCCCEEEEEEEECCCHHHHHHHCCCCCCHHEEEEEEE
IEANFVKQIFASDHIAVQTAVSEIGTKSFHLIQRVIDTETLEVKCICKSIMVTFDLEKHE
ECHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHEEECCCCC
SMPLTEDWIEAICKFEGKDVRKKKN
CCCCCHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA