Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29346713

Identifier: 29346713

GI number: 29346713

Start: 1623311

End: 1624111

Strand: Reverse

Name: 29346713

Synonym: BT_1303

Alternate gene names: NA

Gene position: 1624111-1623311 (Counterclockwise)

Preceding gene: 29346714

Following gene: 29346712

Centisome position: 25.94

GC content: 37.58

Gene sequence:

>801_bases
ATGAAACGCACAACATATATAATAATAGGACTTTTTGTATTGGGCTTATTCTTTATACCTATCCTTCTGCATACACCTGG
CGGTGAGAAAACCGATAATCGTTTATCAATGGAAGGTGAGCGGACTGAAATAGAAATGACGGGAATCCGTCATGTGAAGG
TTGTTGAAAAGCTAGGGAAGATAGATAAAGATCATATAGGCGTGTTAGGTCAGTTGGATGTGGAGGCTTCTCACTCTTCA
GGTAAGAGTATATTTGTGTATCCGAAAAGTCAATATTTGCATGTGACACAAGAAGGGGATTGCTTATTGATTGAAATTAA
TCTGGATAATGAAGATATCTATCAGGTAATTAGACAGGTAGAAAATGGATGCAGATTGGTTTTAGATGGTTTGAATCTGG
AATTGAAAACGGATTCAACATTGTTATCTATTGAGAATCGTGCGGCTAGGCTGGATATTAATGTAAGGAAATTGTGTTTG
GACTCTTTATATCTCTTTAATGACGAATGGCAGAATATCTCATTGACTTCTTGTCGCTTTCGTTCGTTGGATATAAAAGG
AGAGAAGTTGCAATTGAAAGCTGAGTGGGTAGAGGCTACAAACTATTATGAAGAGTTAGGGACTTTTAGAAGTCGTGAGA
CTACTCAGTTTATGGTTGAGAATCTGTATTTATCAGGAAAAGATTCGCATAAGTATCGGCCAGGTATAAATTGTAATCGT
ATCTTCTGGAGTCCTCAGGTCAGAGATGCAGAACTTGAGCTGACCTTGAATCAGAAGAGTGAGATTATATTGAATCGTTG
A

Upstream 100 bases:

>100_bases
TTTTCAGGCAACTTTATACACTTGGTATTTCTATCAAAGAAATAGAGAAGATGTATTATGAGTTTATACAAAGACAAAAT
CAATAATAAACAGATAAGAT

Downstream 100 bases:

>100_bases
ACATAAATGAAAAGGAAATGAAAGTCATAAAGTCTATTGCAGTTTTAAGTCTGTCAGCTTGTTTGTTTGCTTGTACTTCC
AAACCTGATTTAGACGGATT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 266; Mature: 266

Protein sequence:

>266_residues
MKRTTYIIIGLFVLGLFFIPILLHTPGGEKTDNRLSMEGERTEIEMTGIRHVKVVEKLGKIDKDHIGVLGQLDVEASHSS
GKSIFVYPKSQYLHVTQEGDCLLIEINLDNEDIYQVIRQVENGCRLVLDGLNLELKTDSTLLSIENRAARLDINVRKLCL
DSLYLFNDEWQNISLTSCRFRSLDIKGEKLQLKAEWVEATNYYEELGTFRSRETTQFMVENLYLSGKDSHKYRPGINCNR
IFWSPQVRDAELELTLNQKSEIILNR

Sequences:

>Translated_266_residues
MKRTTYIIIGLFVLGLFFIPILLHTPGGEKTDNRLSMEGERTEIEMTGIRHVKVVEKLGKIDKDHIGVLGQLDVEASHSS
GKSIFVYPKSQYLHVTQEGDCLLIEINLDNEDIYQVIRQVENGCRLVLDGLNLELKTDSTLLSIENRAARLDINVRKLCL
DSLYLFNDEWQNISLTSCRFRSLDIKGEKLQLKAEWVEATNYYEELGTFRSRETTQFMVENLYLSGKDSHKYRPGINCNR
IFWSPQVRDAELELTLNQKSEIILNR
>Mature_266_residues
MKRTTYIIIGLFVLGLFFIPILLHTPGGEKTDNRLSMEGERTEIEMTGIRHVKVVEKLGKIDKDHIGVLGQLDVEASHSS
GKSIFVYPKSQYLHVTQEGDCLLIEINLDNEDIYQVIRQVENGCRLVLDGLNLELKTDSTLLSIENRAARLDINVRKLCL
DSLYLFNDEWQNISLTSCRFRSLDIKGEKLQLKAEWVEATNYYEELGTFRSRETTQFMVENLYLSGKDSHKYRPGINCNR
IFWSPQVRDAELELTLNQKSEIILNR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30687; Mature: 30687

Theoretical pI: Translated: 5.70; Mature: 5.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRTTYIIIGLFVLGLFFIPILLHTPGGEKTDNRLSMEGERTEIEMTGIRHVKVVEKLGK
CCCEEEEHHHHHHHHHHHHHHEEECCCCCCCCCEEECCCCCEEEEEECCHHHHHHHHHCC
IDKDHIGVLGQLDVEASHSSGKSIFVYPKSQYLHVTQEGDCLLIEINLDNEDIYQVIRQV
CCCCCCCEEEEEEEEECCCCCCEEEEEECCCEEEEECCCCEEEEEEECCCHHHHHHHHHH
ENGCRLVLDGLNLELKTDSTLLSIENRAARLDINVRKLCLDSLYLFNDEWQNISLTSCRF
CCCCEEEEECCEEEEECCCEEEEECCCEEEEECHHHHHHHHHHEEECCCCCCEEEEEEEE
RSLDIKGEKLQLKAEWVEATNYYEELGTFRSRETTQFMVENLYLSGKDSHKYRPGINCNR
EEECCCCCEEEEEEEHHHHHHHHHHHHCCCCCCHHHHHHHHEEECCCCCCCCCCCCCCCE
IFWSPQVRDAELELTLNQKSEIILNR
EEECCCCCCEEEEEEECCCCEEEECC
>Mature Secondary Structure
MKRTTYIIIGLFVLGLFFIPILLHTPGGEKTDNRLSMEGERTEIEMTGIRHVKVVEKLGK
CCCEEEEHHHHHHHHHHHHHHEEECCCCCCCCCEEECCCCCEEEEEECCHHHHHHHHHCC
IDKDHIGVLGQLDVEASHSSGKSIFVYPKSQYLHVTQEGDCLLIEINLDNEDIYQVIRQV
CCCCCCCEEEEEEEEECCCCCCEEEEEECCCEEEEECCCCEEEEEEECCCHHHHHHHHHH
ENGCRLVLDGLNLELKTDSTLLSIENRAARLDINVRKLCLDSLYLFNDEWQNISLTSCRF
CCCCEEEEECCEEEEECCCEEEEECCCEEEEECHHHHHHHHHHEEECCCCCCEEEEEEEE
RSLDIKGEKLQLKAEWVEATNYYEELGTFRSRETTQFMVENLYLSGKDSHKYRPGINCNR
EEECCCCCEEEEEEEHHHHHHHHHHHHCCCCCCHHHHHHHHEEECCCCCCCCCCCCCCCE
IFWSPQVRDAELELTLNQKSEIILNR
EEECCCCCCEEEEEEECCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA