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The map label for this gene is yehT [C]

Identifier: 29346675

GI number: 29346675

Start: 1572150

End: 1572950

Strand: Reverse

Name: yehT [C]

Synonym: BT_1265

Alternate gene names: 29346675

Gene position: 1572950-1572150 (Counterclockwise)

Preceding gene: 29346676

Following gene: 29346672

Centisome position: 25.13

GC content: 41.95

Gene sequence:

>801_bases
ATGAATAAGATAAAAGCAGCCATCATAGAAGATGAAATTCCGGCAGCCCGTCTGCTGAGGGATACGTTATTGTCTCTTCG
TCCCGATTGGGAGGTACAGTTATTGCCCGGTAATATTGAAGAGGCAGTAGAGTGGTTCGGGCAGCATCCTCATCCGGATA
TCCTGTTTCTGGATATTCAGCTAACGGATGGCAATTCTTTTCTTTTTATAGAACAGGCGCATCCGGAGAGTATGATTGTA
TTTACTACTGCTTATGACGAATATGCTGTGCGTGCTTTCTCAGTGAATAGCATTGACTATCTTTTGAAGCCGATTCATGA
AGACCGCCTGATGCAGACCATTCAACGTTTTGAAGGATTGACAAAGAACTACATCCATGATTTCAATCAGGAAAGCCGGA
TGCTGGAAATATTGCAGCAACTTTCTGCTGCGCATGAGACCTCTGTCTCTGTGCAGAAAAAGTATCGTACTCGTTTCCTT
ATTTCTAGTGGCGAGAAACTATTCACCTTACAGGTGAGTGATATCGCTTACTTTTATTCGGAAAATAAGCTCACCTTTGC
CGTAACCCATAAGAATCGTGAGTATCTCATTGATCTGGCACTAGACCGATTGAGTGAACAACTCGATCCGGATCACTTTT
TCCGGACGAATCGTCAGACATTAGTCTGTATTGATGCCATTCAGCGTATTGAATCCTATTTCTTAGGAAAGGCAATCGTT
CATGTACAACCACCTTTCAAAGATAAGATAATGATAAGTAAAGACAAGATGGCTTCATTCAGAATGTGGCTGAATTATTA
G

Upstream 100 bases:

>100_bases
GGACTTAAGAACCTTTCTGCCCGATATATGTTGTTGTGCAACCGTGACATTGTGGTAGAAAATGACCGGAAAGAGTTTAC
CGTAAAAATACCTTTGCTCT

Downstream 100 bases:

>100_bases
CTGTTTTGTTATCTTCCAAAAGGGAATTGATTTCCCCTATAGCAATACAATACGTTTTTGCATGATATCTGTCAGTTGCG
CCTTCAACTGACGGGCATTG

Product: two-component system response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 266; Mature: 266

Protein sequence:

>266_residues
MNKIKAAIIEDEIPAARLLRDTLLSLRPDWEVQLLPGNIEEAVEWFGQHPHPDILFLDIQLTDGNSFLFIEQAHPESMIV
FTTAYDEYAVRAFSVNSIDYLLKPIHEDRLMQTIQRFEGLTKNYIHDFNQESRMLEILQQLSAAHETSVSVQKKYRTRFL
ISSGEKLFTLQVSDIAYFYSENKLTFAVTHKNREYLIDLALDRLSEQLDPDHFFRTNRQTLVCIDAIQRIESYFLGKAIV
HVQPPFKDKIMISKDKMASFRMWLNY

Sequences:

>Translated_266_residues
MNKIKAAIIEDEIPAARLLRDTLLSLRPDWEVQLLPGNIEEAVEWFGQHPHPDILFLDIQLTDGNSFLFIEQAHPESMIV
FTTAYDEYAVRAFSVNSIDYLLKPIHEDRLMQTIQRFEGLTKNYIHDFNQESRMLEILQQLSAAHETSVSVQKKYRTRFL
ISSGEKLFTLQVSDIAYFYSENKLTFAVTHKNREYLIDLALDRLSEQLDPDHFFRTNRQTLVCIDAIQRIESYFLGKAIV
HVQPPFKDKIMISKDKMASFRMWLNY
>Mature_266_residues
MNKIKAAIIEDEIPAARLLRDTLLSLRPDWEVQLLPGNIEEAVEWFGQHPHPDILFLDIQLTDGNSFLFIEQAHPESMIV
FTTAYDEYAVRAFSVNSIDYLLKPIHEDRLMQTIQRFEGLTKNYIHDFNQESRMLEILQQLSAAHETSVSVQKKYRTRFL
ISSGEKLFTLQVSDIAYFYSENKLTFAVTHKNREYLIDLALDRLSEQLDPDHFFRTNRQTLVCIDAIQRIESYFLGKAIV
HVQPPFKDKIMISKDKMASFRMWLNY

Specific function: Unknown

COG id: COG3279

COG function: function code KT; Response regulator of the LytR/AlgR family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI87082052, Length=232, Percent_Identity=31.4655172413793, Blast_Score=92, Evalue=3e-20,
Organism=Escherichia coli, GI1788724, Length=219, Percent_Identity=27.8538812785388, Blast_Score=88, Evalue=6e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR007492
- InterPro:   IPR001789 [H]

Pfam domain/function: PF04397 LytTR; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 31195; Mature: 31195

Theoretical pI: Translated: 5.82; Mature: 5.82

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50930 HTH_LYTTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKIKAAIIEDEIPAARLLRDTLLSLRPDWEVQLLPGNIEEAVEWFGQHPHPDILFLDIQ
CCCCEEEEECCCCCHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHCCCCCCCEEEEEEE
LTDGNSFLFIEQAHPESMIVFTTAYDEYAVRAFSVNSIDYLLKPIHEDRLMQTIQRFEGL
EECCCEEEEEEECCCCEEEEEEEECCCCEEEEEECCCHHHHHHCCCHHHHHHHHHHHHCC
TKNYIHDFNQESRMLEILQQLSAAHETSVSVQKKYRTRFLISSGEKLFTLQVSDIAYFYS
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCEEEEEEEHHEEEEEE
ENKLTFAVTHKNREYLIDLALDRLSEQLDPDHFFRTNRQTLVCIDAIQRIESYFLGKAIV
CCEEEEEEEECCCHHHHHHHHHHHHHHCCCHHHHHCCCCEEEHHHHHHHHHHHHHCCEEE
HVQPPFKDKIMISKDKMASFRMWLNY
EECCCCCCCEEEEHHHHHHHHHEECC
>Mature Secondary Structure
MNKIKAAIIEDEIPAARLLRDTLLSLRPDWEVQLLPGNIEEAVEWFGQHPHPDILFLDIQ
CCCCEEEEECCCCCHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHCCCCCCCEEEEEEE
LTDGNSFLFIEQAHPESMIVFTTAYDEYAVRAFSVNSIDYLLKPIHEDRLMQTIQRFEGL
EECCCEEEEEEECCCCEEEEEEEECCCCEEEEEECCCHHHHHHCCCHHHHHHHHHHHHCC
TKNYIHDFNQESRMLEILQQLSAAHETSVSVQKKYRTRFLISSGEKLFTLQVSDIAYFYS
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCEEEEEEEHHEEEEEE
ENKLTFAVTHKNREYLIDLALDRLSEQLDPDHFFRTNRQTLVCIDAIQRIESYFLGKAIV
CCEEEEEEEECCCHHHHHHHHHHHHHHCCCHHHHHCCCCEEEHHHHHHHHHHHHHCCEEE
HVQPPFKDKIMISKDKMASFRMWLNY
EECCCCCCCEEEEHHHHHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA