Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
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Accession | NC_004663 |
Length | 6,260,361 |
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The map label for this gene is 29346537
Identifier: 29346537
GI number: 29346537
Start: 1416167
End: 1416733
Strand: Reverse
Name: 29346537
Synonym: BT_1127
Alternate gene names: NA
Gene position: 1416733-1416167 (Counterclockwise)
Preceding gene: 29346543
Following gene: 29346536
Centisome position: 22.63
GC content: 56.61
Gene sequence:
>567_bases ATGCACTGTTCCCTGTATACCCGCTTCAATGTGGAAAATGCGGGGGGGGATTTTTCTGTGGGGGGAGCAAGGGTATGTTT CCGGATTCCCGAAAACCCTTGCTCCCCGCGCCCGGCGGTTGCTGGGAGGGCAAATCCGCTCCCGCCGGTCGCAGATTTTG GAATGAAAGAAGTACGGACGAAAAAGAAAAAACATATGACAAACGATGTGAATGGGATGAAGAAAAAATGTGGCCGTCCG GCACTGGGCAGGACGCGTAAATTGACCAGAGGCGTGACGGTGAAGTTCTCCCCCGTCAGCTACGAGGCTCTCAGGTTCAG GGCAGGGAAGTCCGGCCGGAGTCTGGCGGTCTATATCAGGGAGGCAGCACTGGCGGCCACCGTTACGGCAAGGCATACAC CGGAGGAGAACGCACTGTTGCGCAGCCTGGCGGGAATGGCGAACAACCTGAACCAGCTGACAAAGCTCTCGCACCAGACC GGCTTTTACAGGACAAGGCTGCTGATAGAGGGGCTGCTGGGAAAGCTGAAGCGGATCATGGATGATTACAGGCCGAAAGG AGGATAG
Upstream 100 bases:
>100_bases GAGAACCTTGCCAGGGAGCATCTTGCCGCCTACCGTGGGGACATCGAGCAGTGGAGAAAAATCTGACAGCCTGTTACCGG GCGTGGAGTATACCCGATGT
Downstream 100 bases:
>100_bases CCTCATGATAGGGAAGATCAGGAAAGGCCGCTCGTTCAGCGGCTGCATACGCTACGTGACGCAGAAGGACGACGCAAAAA TCATCGCCTCGGAAGGCGTG
Product: mobilization protein BmgB
Products: NA
Alternate protein names: Mobilization Protein
Number of amino acids: Translated: 188; Mature: 188
Protein sequence:
>188_residues MHCSLYTRFNVENAGGDFSVGGARVCFRIPENPCSPRPAVAGRANPLPPVADFGMKEVRTKKKKHMTNDVNGMKKKCGRP ALGRTRKLTRGVTVKFSPVSYEALRFRAGKSGRSLAVYIREAALAATVTARHTPEENALLRSLAGMANNLNQLTKLSHQT GFYRTRLLIEGLLGKLKRIMDDYRPKGG
Sequences:
>Translated_188_residues MHCSLYTRFNVENAGGDFSVGGARVCFRIPENPCSPRPAVAGRANPLPPVADFGMKEVRTKKKKHMTNDVNGMKKKCGRP ALGRTRKLTRGVTVKFSPVSYEALRFRAGKSGRSLAVYIREAALAATVTARHTPEENALLRSLAGMANNLNQLTKLSHQT GFYRTRLLIEGLLGKLKRIMDDYRPKGG >Mature_188_residues MHCSLYTRFNVENAGGDFSVGGARVCFRIPENPCSPRPAVAGRANPLPPVADFGMKEVRTKKKKHMTNDVNGMKKKCGRP ALGRTRKLTRGVTVKFSPVSYEALRFRAGKSGRSLAVYIREAALAATVTARHTPEENALLRSLAGMANNLNQLTKLSHQT GFYRTRLLIEGLLGKLKRIMDDYRPKGG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20715; Mature: 20715
Theoretical pI: Translated: 11.27; Mature: 11.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHCSLYTRFNVENAGGDFSVGGARVCFRIPENPCSPRPAVAGRANPLPPVADFGMKEVRT CCCEEEEEEEECCCCCCEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHCCHHHHHH KKKKHMTNDVNGMKKKCGRPALGRTRKLTRGVTVKFSPVSYEALRFRAGKSGRSLAVYIR HHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCEEEECCCCHHHHHHHCCCCCCEEEEEEH EAALAATVTARHTPEENALLRSLAGMANNLNQLTKLSHQTGFYRTRLLIEGLLGKLKRIM HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH DDYRPKGG HHCCCCCC >Mature Secondary Structure MHCSLYTRFNVENAGGDFSVGGARVCFRIPENPCSPRPAVAGRANPLPPVADFGMKEVRT CCCEEEEEEEECCCCCCEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHCCHHHHHH KKKKHMTNDVNGMKKKCGRPALGRTRKLTRGVTVKFSPVSYEALRFRAGKSGRSLAVYIR HHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCEEEECCCCHHHHHHHCCCCCCEEEEEEH EAALAATVTARHTPEENALLRSLAGMANNLNQLTKLSHQTGFYRTRLLIEGLLGKLKRIM HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH DDYRPKGG HHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA