Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
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Accession | NC_004663 |
Length | 6,260,361 |
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The map label for this gene is 29346536
Identifier: 29346536
GI number: 29346536
Start: 1415242
End: 1416192
Strand: Reverse
Name: 29346536
Synonym: BT_1126
Alternate gene names: NA
Gene position: 1416192-1415242 (Counterclockwise)
Preceding gene: 29346537
Following gene: 29346535
Centisome position: 22.62
GC content: 52.37
Gene sequence:
>951_bases ATGATTACAGGCCGAAAGGAGGATAGCCTCATGATAGGGAAGATCAGGAAAGGCCGCTCGTTCAGCGGCTGCATACGCTA CGTGACGCAGAAGGACGACGCAAAAATCATCGCCTCGGAAGGCGTGCTGCTGGGAACGGTGGAGGAGACGGCACGCAGTT TCCGGTGGCAATGCCTGCTGAATCCGGACGTGGCGAAACCGGTGGGGCACATTGCGCTCAGCTTCAAGCCGGAGGACGCA CCGAGGCTGACCGACGCGTTCATGGCAAGGCTGGCGGAGGAATACCTGGAGCTGATGGGGATACGGAACACGCAGTTCAT CGTGGTGAGGCATCACGGGACGGACAACCCGCACTGCCACATCGTCTTCAACCGGGTGAACTTCGACGGGAAGGTGATTT CCGACAGCAACGATTTCAAGCGCAACGAGAAAGTGACAAAAATGCTTAAGGACAAGTATTCGCTCACCTATTCCGAAGGC AAACAGTCCGTTAAAACGGAAAAGCTGCATGCTTCCGAAAAGGTGAAATACGAAATATACCGTGCGGTCAAGGAAGCTTT GAGGAGTGCAGATACATGGAAAGAATTTCAAAATAAGCTCTTAAAAATGGGCGTGGAAATGGAATTCAAGTACAAGGAAA ACACTAATGAAGTGCAGGGCATCCGCTTTATAAAGAACGGTCTGTCATTCAAGGGAAGTGGGATTGACCGCAGTTTCAGC TGGTCAAGGCTGGATGCGGCATTGGACCATAACCATGTCACGTCCCTGGAAAATGACGTTTCCCAAAAGCAACCGTACCA TGAACAAAGTCATGGTTCTGTTATTGATAACCTGGTCGAAGTCACCGGTACGGGTGGCGTGTTCATGCCGTCGGTGGCAC CGACGGAGGACGAGAAAGAGGCGGAACGCCTGCGGAGAAAGAAGAAGCGCAGGAAAGGAAGGAGTTTGTGA
Upstream 100 bases:
>100_bases AACAACCTGAACCAGCTGACAAAGCTCTCGCACCAGACCGGCTTTTACAGGACAAGGCTGCTGATAGAGGGGCTGCTGGG AAAGCTGAAGCGGATCATGG
Downstream 100 bases:
>100_bases ACCATATGTATAACAAAAAACTTTGAAAGATGAAAGAGGAAAATTATCTGGAAGGCATCTACGGATGCCTTGAAAGGATC GAGAAGAAAGTGGAGACGCT
Product: mobilization protein BmgA
Products: NA
Alternate protein names: Relaxase/Mobilization Nuclease Family Protein; Mobilization Protein BmgA; Relaxase/Mobilization Nuclease Domain Protein; MbpB Protein; Mobilization Protein MocA/BmgA; MobB Protein; DNA poisomerase; Relaxase/Mobilization Nuclease Domain-Containing Protein; Mobilisation Protein
Number of amino acids: Translated: 316; Mature: 316
Protein sequence:
>316_residues MITGRKEDSLMIGKIRKGRSFSGCIRYVTQKDDAKIIASEGVLLGTVEETARSFRWQCLLNPDVAKPVGHIALSFKPEDA PRLTDAFMARLAEEYLELMGIRNTQFIVVRHHGTDNPHCHIVFNRVNFDGKVISDSNDFKRNEKVTKMLKDKYSLTYSEG KQSVKTEKLHASEKVKYEIYRAVKEALRSADTWKEFQNKLLKMGVEMEFKYKENTNEVQGIRFIKNGLSFKGSGIDRSFS WSRLDAALDHNHVTSLENDVSQKQPYHEQSHGSVIDNLVEVTGTGGVFMPSVAPTEDEKEAERLRRKKKRRKGRSL
Sequences:
>Translated_316_residues MITGRKEDSLMIGKIRKGRSFSGCIRYVTQKDDAKIIASEGVLLGTVEETARSFRWQCLLNPDVAKPVGHIALSFKPEDA PRLTDAFMARLAEEYLELMGIRNTQFIVVRHHGTDNPHCHIVFNRVNFDGKVISDSNDFKRNEKVTKMLKDKYSLTYSEG KQSVKTEKLHASEKVKYEIYRAVKEALRSADTWKEFQNKLLKMGVEMEFKYKENTNEVQGIRFIKNGLSFKGSGIDRSFS WSRLDAALDHNHVTSLENDVSQKQPYHEQSHGSVIDNLVEVTGTGGVFMPSVAPTEDEKEAERLRRKKKRRKGRSL >Mature_316_residues MITGRKEDSLMIGKIRKGRSFSGCIRYVTQKDDAKIIASEGVLLGTVEETARSFRWQCLLNPDVAKPVGHIALSFKPEDA PRLTDAFMARLAEEYLELMGIRNTQFIVVRHHGTDNPHCHIVFNRVNFDGKVISDSNDFKRNEKVTKMLKDKYSLTYSEG KQSVKTEKLHASEKVKYEIYRAVKEALRSADTWKEFQNKLLKMGVEMEFKYKENTNEVQGIRFIKNGLSFKGSGIDRSFS WSRLDAALDHNHVTSLENDVSQKQPYHEQSHGSVIDNLVEVTGTGGVFMPSVAPTEDEKEAERLRRKKKRRKGRSL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36131; Mature: 36131
Theoretical pI: Translated: 9.93; Mature: 9.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITGRKEDSLMIGKIRKGRSFSGCIRYVTQKDDAKIIASEGVLLGTVEETARSFRWQCLL CCCCCCCCCEEEECCCCCCCHHHHHHHHHCCCCCEEEECCCEEEEEHHHHHHCEEEEEEE NPDVAKPVGHIALSFKPEDAPRLTDAFMARLAEEYLELMGIRNTQFIVVRHHGTDNPHCH CCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCEEE IVFNRVNFDGKVISDSNDFKRNEKVTKMLKDKYSLTYSEGKQSVKTEKLHASEKVKYEIY EEEEEECCCCEEECCCCHHHHHHHHHHHHHHHHCEEHHHHHHHHHHHHHHHHHHHHHHHH RAVKEALRSADTWKEFQNKLLKMGVEMEFKYKENTNEVQGIRFIKNGLSFKGSGIDRSFS HHHHHHHHCCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCC WSRLDAALDHNHVTSLENDVSQKQPYHEQSHGSVIDNLVEVTGTGGVFMPSVAPTEDEKE HHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCEECCCCCCCCCHHH AERLRRKKKRRKGRSL HHHHHHHHHHHCCCCC >Mature Secondary Structure MITGRKEDSLMIGKIRKGRSFSGCIRYVTQKDDAKIIASEGVLLGTVEETARSFRWQCLL CCCCCCCCCEEEECCCCCCCHHHHHHHHHCCCCCEEEECCCEEEEEHHHHHHCEEEEEEE NPDVAKPVGHIALSFKPEDAPRLTDAFMARLAEEYLELMGIRNTQFIVVRHHGTDNPHCH CCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCEEE IVFNRVNFDGKVISDSNDFKRNEKVTKMLKDKYSLTYSEGKQSVKTEKLHASEKVKYEIY EEEEEECCCCEEECCCCHHHHHHHHHHHHHHHHCEEHHHHHHHHHHHHHHHHHHHHHHHH RAVKEALRSADTWKEFQNKLLKMGVEMEFKYKENTNEVQGIRFIKNGLSFKGSGIDRSFS HHHHHHHHCCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCC WSRLDAALDHNHVTSLENDVSQKQPYHEQSHGSVIDNLVEVTGTGGVFMPSVAPTEDEKE HHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCEECCCCCCCCCHHH AERLRRKKKRRKGRSL HHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA