Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
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Accession | NC_004663 |
Length | 6,260,361 |
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The map label for this gene is 29346535
Identifier: 29346535
GI number: 29346535
Start: 1414451
End: 1415212
Strand: Reverse
Name: 29346535
Synonym: BT_1125
Alternate gene names: NA
Gene position: 1415212-1414451 (Counterclockwise)
Preceding gene: 29346536
Following gene: 29346534
Centisome position: 22.61
GC content: 53.81
Gene sequence:
>762_bases ATGAAAGAGGAAAATTATCTGGAAGGCATCTACGGATGCCTTGAAAGGATCGAGAAGAAAGTGGAGACGCTGCCCGTGGA AGGCACAAGCCCCGCAGTTGGAAACCGGACCAGTTCCCCGGAAGGGATTGCGGAACTGAAAATCCGTCTGGAACGCCTGC AATCCGCGGTGGAGAAAAACGGCTTGGAAATAGCAGCGGTACGTAACCATACCGTCCGGTTGTCGGAAGGCTGGCCGTTG TCTGCCGAAACGTTTGCCGGGGAGATGGAAAAGATTAGATACTGCCTGAGTCAAGACTGCCAAGCTGTAAAGGAGACAGT GAGACGGCTGGATGAGAGAATGGTCCTGCTGAAAAAGGAACCGGAGCGCAGACTGGTGACCTACCGTCTGGAAAGCGCAT CCAAGGCAGTGGTAACGACAGCTTCAGCACTGATCCTGGCACTGATCATTTCCGTCTGGACCAACTGCAACCAGTACCGC ACGAACCGGCTTTTGAAAGATGCCGATTTGAAATACCGAGCCATCAGGATCTGCCTGCCGGGGGATGATCCCGACATCGC CTTCCTTGAGAAGCATTTCACCATCAAGCGGGACGAGGAAAAGATCCGGCGTGTGGAAAGGCTGGTGACCGCTTTTGAGG ACTCGGTCAGGAACCGCATCCGTAACCATGAAATGGCAGCCTACAAGGACAGTCTGGCGCACCGGCTGTTCAGGGAGGCA CAGGAAATCAGGAAGCAACTGGACAATCCCAATTCAAAATGA
Upstream 100 bases:
>100_bases CGACGGAGGACGAGAAAGAGGCGGAACGCCTGCGGAGAAAGAAGAAGCGCAGGAAAGGAAGGAGTTTGTGAACCATATGT ATAACAAAAAACTTTGAAAG
Downstream 100 bases:
>100_bases CTGCACTATGGCAACAATCAGAACCAAATTCAGGTCCTCGTCCGCGGAAGGCAGGGAGGGCGCACTGTATTATCAGGTGA TTCATAACCGTGTGGTCAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 253; Mature: 253
Protein sequence:
>253_residues MKEENYLEGIYGCLERIEKKVETLPVEGTSPAVGNRTSSPEGIAELKIRLERLQSAVEKNGLEIAAVRNHTVRLSEGWPL SAETFAGEMEKIRYCLSQDCQAVKETVRRLDERMVLLKKEPERRLVTYRLESASKAVVTTASALILALIISVWTNCNQYR TNRLLKDADLKYRAIRICLPGDDPDIAFLEKHFTIKRDEEKIRRVERLVTAFEDSVRNRIRNHEMAAYKDSLAHRLFREA QEIRKQLDNPNSK
Sequences:
>Translated_253_residues MKEENYLEGIYGCLERIEKKVETLPVEGTSPAVGNRTSSPEGIAELKIRLERLQSAVEKNGLEIAAVRNHTVRLSEGWPL SAETFAGEMEKIRYCLSQDCQAVKETVRRLDERMVLLKKEPERRLVTYRLESASKAVVTTASALILALIISVWTNCNQYR TNRLLKDADLKYRAIRICLPGDDPDIAFLEKHFTIKRDEEKIRRVERLVTAFEDSVRNRIRNHEMAAYKDSLAHRLFREA QEIRKQLDNPNSK >Mature_253_residues MKEENYLEGIYGCLERIEKKVETLPVEGTSPAVGNRTSSPEGIAELKIRLERLQSAVEKNGLEIAAVRNHTVRLSEGWPL SAETFAGEMEKIRYCLSQDCQAVKETVRRLDERMVLLKKEPERRLVTYRLESASKAVVTTASALILALIISVWTNCNQYR TNRLLKDADLKYRAIRICLPGDDPDIAFLEKHFTIKRDEEKIRRVERLVTAFEDSVRNRIRNHEMAAYKDSLAHRLFREA QEIRKQLDNPNSK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29185; Mature: 29185
Theoretical pI: Translated: 8.93; Mature: 8.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKEENYLEGIYGCLERIEKKVETLPVEGTSPAVGNRTSSPEGIAELKIRLERLQSAVEKN CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHC GLEIAAVRNHTVRLSEGWPLSAETFAGEMEKIRYCLSQDCQAVKETVRRLDERMVLLKKE CCEEEEECCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PERRLVTYRLESASKAVVTTASALILALIISVWTNCNQYRTNRLLKDADLKYRAIRICLP CHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCEEEEEEEEC GDDPDIAFLEKHFTIKRDEEKIRRVERLVTAFEDSVRNRIRNHEMAAYKDSLAHRLFREA CCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QEIRKQLDNPNSK HHHHHHHCCCCCC >Mature Secondary Structure MKEENYLEGIYGCLERIEKKVETLPVEGTSPAVGNRTSSPEGIAELKIRLERLQSAVEKN CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHC GLEIAAVRNHTVRLSEGWPLSAETFAGEMEKIRYCLSQDCQAVKETVRRLDERMVLLKKE CCEEEEECCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PERRLVTYRLESASKAVVTTASALILALIISVWTNCNQYRTNRLLKDADLKYRAIRICLP CHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCEEEEEEEEC GDDPDIAFLEKHFTIKRDEEKIRRVERLVTAFEDSVRNRIRNHEMAAYKDSLAHRLFREA CCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QEIRKQLDNPNSK HHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA