Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29346427

Identifier: 29346427

GI number: 29346427

Start: 1270084

End: 1272045

Strand: Reverse

Name: 29346427

Synonym: BT_1017

Alternate gene names: NA

Gene position: 1272045-1270084 (Counterclockwise)

Preceding gene: 29346428

Following gene: 29346426

Centisome position: 20.32

GC content: 43.63

Gene sequence:

>1962_bases
ATGAAACGAATCCTTTTCTCATTGCTTCTCGCTGCATCTCTTTCGGCAGAAGCACAGACGCAGACATACGAGACGGAATT
TGCCCGTCCCTTGAATGAAGTATTGACAGATATTCAAAATCGTTTCGGAATCCGTCTGAAATATGATATCGATACGGTAG
GGAAGATTTTGCCTTATGCTGATTTCCGTATTCGCCCTTATTCTGTAGAAGAATCTTTGACGAATGTATTGTCACCATTC
GATTATAAATTTGTCAGACAGAGCGGTAATCTATATAAGTTGAAGGCTTATGAATATCCTCGTCGTACAGATGCTGACGG
AGAAAAAATGCTGGCTTATCTCAATACGCTTTATGCGGATAAGCAGGCTTTTGAACTTCGTGCCGATTCACTGAGAAAAG
AGGTCCGTCAACGTTTGGGGATCGATACTTTATTGGCTCAATGTGTAAACTCAACCCCCATTCTATCGAAAATACGGAAG
TTTGATGGCTATACTGTGCAGAATTTCGCACTTGAAACACTTCCGGGACTGTATGTTTGCGGGTCTGTTTATACGCCTCA
ATCGAAAGGGAAACACGCTCTGATTATTTGTCCGAACGGACATTTTGGTGGCGGTCGTTATCGGGAAGATCAGCAGCAGC
GTATGGGTACATTAGCTCGTATGGGAGCTGTTTGTGTCGATTATGATTTGTTTGGCTGGGGAGAATCAATTCTCCAGGTG
GGAAGTACGGCGCATCGCAGTAGTGCGGCACATACTATTCAGGCAATGAATGGATTGTTGATTCTCGATTATATGCTCGC
TTCCCGTAAAGATATCGATACCAAGCGTATTGGTGCCAACGGTGGTTCCGGTGGTGGAACGCATACTGTACTACTGACAA
CGTTGGATGACCGTTTTACTGCTTCTGCCCCGGTGGTTAGTCTGGCTTCTCATTTCGATGGCGGTTGTCCTTGTGAAAGC
GGTATGCCTATTCAGTTATCGGCAGGAGGTACTTGTAATGCTGAACTGGCTGCAACATTCGCTCCCCGTCCGCAATTAGT
GGTTTCTGATGGCGGGGACTGGACAGCAAGTGTTCCTGCACTTGAATTTCCGTATTTGCAGCGTATCTATGGATTCTATG
ATGCGAAAGACAACGTGACGAACGTTCATCTTCCCAAAGAAAAACATGATTTCGGTCCGAATAAAAGAAATGCAGTCTAT
GATTTCTTTGCCGAAGTCTTCGATTTAGATAAAAAGATGTTGGATGAGAGTAAAGTAACTATCGAACCGGAGTCTGCCAT
GTACAGCTTTGGAGAGAAAGGGGAGCTACTACCGGAAAATGCAATTCGTTCGTTCGACAAGGTGGCTGCTTATTTTGATA
AGAAGGCTTTTGCCAAATTGAAATCGGATGCTTCTCTTGAAAAGAAAGCAATGGAATGGGTAGCTTCACTCAATCTGGAT
GATGAAAAGAAATCAGGTTTTGCGGTGACGACTATTTATAATCATCTTCGCCAGGTTCGAGACTGGCATAATGATCATCC
ATACACGACAATACCTGCGGGTATCAATCCTACAACGGGCAAACCGTTAACTCAGCTCGAACGTGAGATAATAGCAGACT
CAGCTATGCCCAAGGAGGTTCATGAAAGACTGATGAAAGGGCTGCGCAGAGTACTGACGGAAGAACAAGTTGAGCAGATT
TTAGATAAATATACAGTTGGCAAAGTCGCTTTTACCATGAAAGGGTATCAGGAGATTGTTCCTGATATGACGGAGGAAGA
AACAGCCTTTATACTTGAACAGCTGAAACTGGCTCGCGAACAAGCTGTTGATTACAAAAGCATGAAACAGATATCTGCTA
TCTTTAAAGCTTATAAAACGAAGATCGAACTGTATTTCTATGAACATGGCCGTAACTGGCGCCAAATGTATAAAGACTAT
GCAGAAAAGCGAAAGGCGGAAAAAGCAAAAGAAGGGAAATAG

Upstream 100 bases:

>100_bases
GATTGTGAACGTATCACTATGGATGACGTAATTATTAACGGTGAAGAAATGAAACTGAAATAAACCTCTTGGGAGGTTAC
ATCTTTATAAATATAAGAAA

Downstream 100 bases:

>100_bases
AGAATCAAAGATCCTTTTTTATTAATGCGTACTATAAGCAGCAATACCTCTGACATAGAGAGGATTGCTGCTTTTTGCTT
CATTTACTTCTAGAATAATA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 653; Mature: 653

Protein sequence:

>653_residues
MKRILFSLLLAASLSAEAQTQTYETEFARPLNEVLTDIQNRFGIRLKYDIDTVGKILPYADFRIRPYSVEESLTNVLSPF
DYKFVRQSGNLYKLKAYEYPRRTDADGEKMLAYLNTLYADKQAFELRADSLRKEVRQRLGIDTLLAQCVNSTPILSKIRK
FDGYTVQNFALETLPGLYVCGSVYTPQSKGKHALIICPNGHFGGGRYREDQQQRMGTLARMGAVCVDYDLFGWGESILQV
GSTAHRSSAAHTIQAMNGLLILDYMLASRKDIDTKRIGANGGSGGGTHTVLLTTLDDRFTASAPVVSLASHFDGGCPCES
GMPIQLSAGGTCNAELAATFAPRPQLVVSDGGDWTASVPALEFPYLQRIYGFYDAKDNVTNVHLPKEKHDFGPNKRNAVY
DFFAEVFDLDKKMLDESKVTIEPESAMYSFGEKGELLPENAIRSFDKVAAYFDKKAFAKLKSDASLEKKAMEWVASLNLD
DEKKSGFAVTTIYNHLRQVRDWHNDHPYTTIPAGINPTTGKPLTQLEREIIADSAMPKEVHERLMKGLRRVLTEEQVEQI
LDKYTVGKVAFTMKGYQEIVPDMTEEETAFILEQLKLAREQAVDYKSMKQISAIFKAYKTKIELYFYEHGRNWRQMYKDY
AEKRKAEKAKEGK

Sequences:

>Translated_653_residues
MKRILFSLLLAASLSAEAQTQTYETEFARPLNEVLTDIQNRFGIRLKYDIDTVGKILPYADFRIRPYSVEESLTNVLSPF
DYKFVRQSGNLYKLKAYEYPRRTDADGEKMLAYLNTLYADKQAFELRADSLRKEVRQRLGIDTLLAQCVNSTPILSKIRK
FDGYTVQNFALETLPGLYVCGSVYTPQSKGKHALIICPNGHFGGGRYREDQQQRMGTLARMGAVCVDYDLFGWGESILQV
GSTAHRSSAAHTIQAMNGLLILDYMLASRKDIDTKRIGANGGSGGGTHTVLLTTLDDRFTASAPVVSLASHFDGGCPCES
GMPIQLSAGGTCNAELAATFAPRPQLVVSDGGDWTASVPALEFPYLQRIYGFYDAKDNVTNVHLPKEKHDFGPNKRNAVY
DFFAEVFDLDKKMLDESKVTIEPESAMYSFGEKGELLPENAIRSFDKVAAYFDKKAFAKLKSDASLEKKAMEWVASLNLD
DEKKSGFAVTTIYNHLRQVRDWHNDHPYTTIPAGINPTTGKPLTQLEREIIADSAMPKEVHERLMKGLRRVLTEEQVEQI
LDKYTVGKVAFTMKGYQEIVPDMTEEETAFILEQLKLAREQAVDYKSMKQISAIFKAYKTKIELYFYEHGRNWRQMYKDY
AEKRKAEKAKEGK
>Mature_653_residues
MKRILFSLLLAASLSAEAQTQTYETEFARPLNEVLTDIQNRFGIRLKYDIDTVGKILPYADFRIRPYSVEESLTNVLSPF
DYKFVRQSGNLYKLKAYEYPRRTDADGEKMLAYLNTLYADKQAFELRADSLRKEVRQRLGIDTLLAQCVNSTPILSKIRK
FDGYTVQNFALETLPGLYVCGSVYTPQSKGKHALIICPNGHFGGGRYREDQQQRMGTLARMGAVCVDYDLFGWGESILQV
GSTAHRSSAAHTIQAMNGLLILDYMLASRKDIDTKRIGANGGSGGGTHTVLLTTLDDRFTASAPVVSLASHFDGGCPCES
GMPIQLSAGGTCNAELAATFAPRPQLVVSDGGDWTASVPALEFPYLQRIYGFYDAKDNVTNVHLPKEKHDFGPNKRNAVY
DFFAEVFDLDKKMLDESKVTIEPESAMYSFGEKGELLPENAIRSFDKVAAYFDKKAFAKLKSDASLEKKAMEWVASLNLD
DEKKSGFAVTTIYNHLRQVRDWHNDHPYTTIPAGINPTTGKPLTQLEREIIADSAMPKEVHERLMKGLRRVLTEEQVEQI
LDKYTVGKVAFTMKGYQEIVPDMTEEETAFILEQLKLAREQAVDYKSMKQISAIFKAYKTKIELYFYEHGRNWRQMYKDY
AEKRKAEKAKEGK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 73662; Mature: 73662

Theoretical pI: Translated: 7.59; Mature: 7.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRILFSLLLAASLSAEAQTQTYETEFARPLNEVLTDIQNRFGIRLKYDIDTVGKILPYA
CHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHCCCC
DFRIRPYSVEESLTNVLSPFDYKFVRQSGNLYKLKAYEYPRRTDADGEKMLAYLNTLYAD
CCEECCCCHHHHHHHHHCCCHHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHCC
KQAFELRADSLRKEVRQRLGIDTLLAQCVNSTPILSKIRKFDGYTVQNFALETLPGLYVC
HHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHCCCCEEE
GSVYTPQSKGKHALIICPNGHFGGGRYREDQQQRMGTLARMGAVCVDYDLFGWGESILQV
CCEECCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCHHHEECCHHHCCHHHHHH
GSTAHRSSAAHTIQAMNGLLILDYMLASRKDIDTKRIGANGGSGGGTHTVLLTTLDDRFT
CCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHCCCCCCCCCCCEEEEEEECCCCCC
ASAPVVSLASHFDGGCPCESGMPIQLSAGGTCNAELAATFAPRPQLVVSDGGDWTASVPA
CCCHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCEEEECCCCCEEEECCCCCEECCCC
LEFPYLQRIYGFYDAKDNVTNVHLPKEKHDFGPNKRNAVYDFFAEVFDLDKKMLDESKVT
CCCHHHHHHHHHHCCCCCCEEEECCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEE
IEPESAMYSFGEKGELLPENAIRSFDKVAAYFDKKAFAKLKSDASLEKKAMEWVASLNLD
ECCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCC
DEKKSGFAVTTIYNHLRQVRDWHNDHPYTTIPAGINPTTGKPLTQLEREIIADSAMPKEV
CCCCCCEEHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCHHHHHHHHHHHCCCCCHHH
HERLMKGLRRVLTEEQVEQILDKYTVGKVAFTMKGYQEIVPDMTEEETAFILEQLKLARE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
QAVDYKSMKQISAIFKAYKTKIELYFYEHGRNWRQMYKDYAEKRKAEKAKEGK
HHHCHHHHHHHHHHHHHHHHEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKRILFSLLLAASLSAEAQTQTYETEFARPLNEVLTDIQNRFGIRLKYDIDTVGKILPYA
CHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHCCCC
DFRIRPYSVEESLTNVLSPFDYKFVRQSGNLYKLKAYEYPRRTDADGEKMLAYLNTLYAD
CCEECCCCHHHHHHHHHCCCHHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHCC
KQAFELRADSLRKEVRQRLGIDTLLAQCVNSTPILSKIRKFDGYTVQNFALETLPGLYVC
HHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHCCCCEEE
GSVYTPQSKGKHALIICPNGHFGGGRYREDQQQRMGTLARMGAVCVDYDLFGWGESILQV
CCEECCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCHHHEECCHHHCCHHHHHH
GSTAHRSSAAHTIQAMNGLLILDYMLASRKDIDTKRIGANGGSGGGTHTVLLTTLDDRFT
CCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHCCCCCCCCCCCEEEEEEECCCCCC
ASAPVVSLASHFDGGCPCESGMPIQLSAGGTCNAELAATFAPRPQLVVSDGGDWTASVPA
CCCHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCEEEECCCCCEEEECCCCCEECCCC
LEFPYLQRIYGFYDAKDNVTNVHLPKEKHDFGPNKRNAVYDFFAEVFDLDKKMLDESKVT
CCCHHHHHHHHHHCCCCCCEEEECCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEE
IEPESAMYSFGEKGELLPENAIRSFDKVAAYFDKKAFAKLKSDASLEKKAMEWVASLNLD
ECCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCC
DEKKSGFAVTTIYNHLRQVRDWHNDHPYTTIPAGINPTTGKPLTQLEREIIADSAMPKEV
CCCCCCEEHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCHHHHHHHHHHHCCCCCHHH
HERLMKGLRRVLTEEQVEQILDKYTVGKVAFTMKGYQEIVPDMTEEETAFILEQLKLARE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
QAVDYKSMKQISAIFKAYKTKIELYFYEHGRNWRQMYKDYAEKRKAEKAKEGK
HHHCHHHHHHHHHHHHHHHHEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA