| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
Click here to switch to the map view.
The map label for this gene is 29346427
Identifier: 29346427
GI number: 29346427
Start: 1270084
End: 1272045
Strand: Reverse
Name: 29346427
Synonym: BT_1017
Alternate gene names: NA
Gene position: 1272045-1270084 (Counterclockwise)
Preceding gene: 29346428
Following gene: 29346426
Centisome position: 20.32
GC content: 43.63
Gene sequence:
>1962_bases ATGAAACGAATCCTTTTCTCATTGCTTCTCGCTGCATCTCTTTCGGCAGAAGCACAGACGCAGACATACGAGACGGAATT TGCCCGTCCCTTGAATGAAGTATTGACAGATATTCAAAATCGTTTCGGAATCCGTCTGAAATATGATATCGATACGGTAG GGAAGATTTTGCCTTATGCTGATTTCCGTATTCGCCCTTATTCTGTAGAAGAATCTTTGACGAATGTATTGTCACCATTC GATTATAAATTTGTCAGACAGAGCGGTAATCTATATAAGTTGAAGGCTTATGAATATCCTCGTCGTACAGATGCTGACGG AGAAAAAATGCTGGCTTATCTCAATACGCTTTATGCGGATAAGCAGGCTTTTGAACTTCGTGCCGATTCACTGAGAAAAG AGGTCCGTCAACGTTTGGGGATCGATACTTTATTGGCTCAATGTGTAAACTCAACCCCCATTCTATCGAAAATACGGAAG TTTGATGGCTATACTGTGCAGAATTTCGCACTTGAAACACTTCCGGGACTGTATGTTTGCGGGTCTGTTTATACGCCTCA ATCGAAAGGGAAACACGCTCTGATTATTTGTCCGAACGGACATTTTGGTGGCGGTCGTTATCGGGAAGATCAGCAGCAGC GTATGGGTACATTAGCTCGTATGGGAGCTGTTTGTGTCGATTATGATTTGTTTGGCTGGGGAGAATCAATTCTCCAGGTG GGAAGTACGGCGCATCGCAGTAGTGCGGCACATACTATTCAGGCAATGAATGGATTGTTGATTCTCGATTATATGCTCGC TTCCCGTAAAGATATCGATACCAAGCGTATTGGTGCCAACGGTGGTTCCGGTGGTGGAACGCATACTGTACTACTGACAA CGTTGGATGACCGTTTTACTGCTTCTGCCCCGGTGGTTAGTCTGGCTTCTCATTTCGATGGCGGTTGTCCTTGTGAAAGC GGTATGCCTATTCAGTTATCGGCAGGAGGTACTTGTAATGCTGAACTGGCTGCAACATTCGCTCCCCGTCCGCAATTAGT GGTTTCTGATGGCGGGGACTGGACAGCAAGTGTTCCTGCACTTGAATTTCCGTATTTGCAGCGTATCTATGGATTCTATG ATGCGAAAGACAACGTGACGAACGTTCATCTTCCCAAAGAAAAACATGATTTCGGTCCGAATAAAAGAAATGCAGTCTAT GATTTCTTTGCCGAAGTCTTCGATTTAGATAAAAAGATGTTGGATGAGAGTAAAGTAACTATCGAACCGGAGTCTGCCAT GTACAGCTTTGGAGAGAAAGGGGAGCTACTACCGGAAAATGCAATTCGTTCGTTCGACAAGGTGGCTGCTTATTTTGATA AGAAGGCTTTTGCCAAATTGAAATCGGATGCTTCTCTTGAAAAGAAAGCAATGGAATGGGTAGCTTCACTCAATCTGGAT GATGAAAAGAAATCAGGTTTTGCGGTGACGACTATTTATAATCATCTTCGCCAGGTTCGAGACTGGCATAATGATCATCC ATACACGACAATACCTGCGGGTATCAATCCTACAACGGGCAAACCGTTAACTCAGCTCGAACGTGAGATAATAGCAGACT CAGCTATGCCCAAGGAGGTTCATGAAAGACTGATGAAAGGGCTGCGCAGAGTACTGACGGAAGAACAAGTTGAGCAGATT TTAGATAAATATACAGTTGGCAAAGTCGCTTTTACCATGAAAGGGTATCAGGAGATTGTTCCTGATATGACGGAGGAAGA AACAGCCTTTATACTTGAACAGCTGAAACTGGCTCGCGAACAAGCTGTTGATTACAAAAGCATGAAACAGATATCTGCTA TCTTTAAAGCTTATAAAACGAAGATCGAACTGTATTTCTATGAACATGGCCGTAACTGGCGCCAAATGTATAAAGACTAT GCAGAAAAGCGAAAGGCGGAAAAAGCAAAAGAAGGGAAATAG
Upstream 100 bases:
>100_bases GATTGTGAACGTATCACTATGGATGACGTAATTATTAACGGTGAAGAAATGAAACTGAAATAAACCTCTTGGGAGGTTAC ATCTTTATAAATATAAGAAA
Downstream 100 bases:
>100_bases AGAATCAAAGATCCTTTTTTATTAATGCGTACTATAAGCAGCAATACCTCTGACATAGAGAGGATTGCTGCTTTTTGCTT CATTTACTTCTAGAATAATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 653; Mature: 653
Protein sequence:
>653_residues MKRILFSLLLAASLSAEAQTQTYETEFARPLNEVLTDIQNRFGIRLKYDIDTVGKILPYADFRIRPYSVEESLTNVLSPF DYKFVRQSGNLYKLKAYEYPRRTDADGEKMLAYLNTLYADKQAFELRADSLRKEVRQRLGIDTLLAQCVNSTPILSKIRK FDGYTVQNFALETLPGLYVCGSVYTPQSKGKHALIICPNGHFGGGRYREDQQQRMGTLARMGAVCVDYDLFGWGESILQV GSTAHRSSAAHTIQAMNGLLILDYMLASRKDIDTKRIGANGGSGGGTHTVLLTTLDDRFTASAPVVSLASHFDGGCPCES GMPIQLSAGGTCNAELAATFAPRPQLVVSDGGDWTASVPALEFPYLQRIYGFYDAKDNVTNVHLPKEKHDFGPNKRNAVY DFFAEVFDLDKKMLDESKVTIEPESAMYSFGEKGELLPENAIRSFDKVAAYFDKKAFAKLKSDASLEKKAMEWVASLNLD DEKKSGFAVTTIYNHLRQVRDWHNDHPYTTIPAGINPTTGKPLTQLEREIIADSAMPKEVHERLMKGLRRVLTEEQVEQI LDKYTVGKVAFTMKGYQEIVPDMTEEETAFILEQLKLAREQAVDYKSMKQISAIFKAYKTKIELYFYEHGRNWRQMYKDY AEKRKAEKAKEGK
Sequences:
>Translated_653_residues MKRILFSLLLAASLSAEAQTQTYETEFARPLNEVLTDIQNRFGIRLKYDIDTVGKILPYADFRIRPYSVEESLTNVLSPF DYKFVRQSGNLYKLKAYEYPRRTDADGEKMLAYLNTLYADKQAFELRADSLRKEVRQRLGIDTLLAQCVNSTPILSKIRK FDGYTVQNFALETLPGLYVCGSVYTPQSKGKHALIICPNGHFGGGRYREDQQQRMGTLARMGAVCVDYDLFGWGESILQV GSTAHRSSAAHTIQAMNGLLILDYMLASRKDIDTKRIGANGGSGGGTHTVLLTTLDDRFTASAPVVSLASHFDGGCPCES GMPIQLSAGGTCNAELAATFAPRPQLVVSDGGDWTASVPALEFPYLQRIYGFYDAKDNVTNVHLPKEKHDFGPNKRNAVY DFFAEVFDLDKKMLDESKVTIEPESAMYSFGEKGELLPENAIRSFDKVAAYFDKKAFAKLKSDASLEKKAMEWVASLNLD DEKKSGFAVTTIYNHLRQVRDWHNDHPYTTIPAGINPTTGKPLTQLEREIIADSAMPKEVHERLMKGLRRVLTEEQVEQI LDKYTVGKVAFTMKGYQEIVPDMTEEETAFILEQLKLAREQAVDYKSMKQISAIFKAYKTKIELYFYEHGRNWRQMYKDY AEKRKAEKAKEGK >Mature_653_residues MKRILFSLLLAASLSAEAQTQTYETEFARPLNEVLTDIQNRFGIRLKYDIDTVGKILPYADFRIRPYSVEESLTNVLSPF DYKFVRQSGNLYKLKAYEYPRRTDADGEKMLAYLNTLYADKQAFELRADSLRKEVRQRLGIDTLLAQCVNSTPILSKIRK FDGYTVQNFALETLPGLYVCGSVYTPQSKGKHALIICPNGHFGGGRYREDQQQRMGTLARMGAVCVDYDLFGWGESILQV GSTAHRSSAAHTIQAMNGLLILDYMLASRKDIDTKRIGANGGSGGGTHTVLLTTLDDRFTASAPVVSLASHFDGGCPCES GMPIQLSAGGTCNAELAATFAPRPQLVVSDGGDWTASVPALEFPYLQRIYGFYDAKDNVTNVHLPKEKHDFGPNKRNAVY DFFAEVFDLDKKMLDESKVTIEPESAMYSFGEKGELLPENAIRSFDKVAAYFDKKAFAKLKSDASLEKKAMEWVASLNLD DEKKSGFAVTTIYNHLRQVRDWHNDHPYTTIPAGINPTTGKPLTQLEREIIADSAMPKEVHERLMKGLRRVLTEEQVEQI LDKYTVGKVAFTMKGYQEIVPDMTEEETAFILEQLKLAREQAVDYKSMKQISAIFKAYKTKIELYFYEHGRNWRQMYKDY AEKRKAEKAKEGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 73662; Mature: 73662
Theoretical pI: Translated: 7.59; Mature: 7.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRILFSLLLAASLSAEAQTQTYETEFARPLNEVLTDIQNRFGIRLKYDIDTVGKILPYA CHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHCCCC DFRIRPYSVEESLTNVLSPFDYKFVRQSGNLYKLKAYEYPRRTDADGEKMLAYLNTLYAD CCEECCCCHHHHHHHHHCCCHHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHCC KQAFELRADSLRKEVRQRLGIDTLLAQCVNSTPILSKIRKFDGYTVQNFALETLPGLYVC HHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHCCCCEEE GSVYTPQSKGKHALIICPNGHFGGGRYREDQQQRMGTLARMGAVCVDYDLFGWGESILQV CCEECCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCHHHEECCHHHCCHHHHHH GSTAHRSSAAHTIQAMNGLLILDYMLASRKDIDTKRIGANGGSGGGTHTVLLTTLDDRFT CCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHCCCCCCCCCCCEEEEEEECCCCCC ASAPVVSLASHFDGGCPCESGMPIQLSAGGTCNAELAATFAPRPQLVVSDGGDWTASVPA CCCHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCEEEECCCCCEEEECCCCCEECCCC LEFPYLQRIYGFYDAKDNVTNVHLPKEKHDFGPNKRNAVYDFFAEVFDLDKKMLDESKVT CCCHHHHHHHHHHCCCCCCEEEECCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEE IEPESAMYSFGEKGELLPENAIRSFDKVAAYFDKKAFAKLKSDASLEKKAMEWVASLNLD ECCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCC DEKKSGFAVTTIYNHLRQVRDWHNDHPYTTIPAGINPTTGKPLTQLEREIIADSAMPKEV CCCCCCEEHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCHHHHHHHHHHHCCCCCHHH HERLMKGLRRVLTEEQVEQILDKYTVGKVAFTMKGYQEIVPDMTEEETAFILEQLKLARE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH QAVDYKSMKQISAIFKAYKTKIELYFYEHGRNWRQMYKDYAEKRKAEKAKEGK HHHCHHHHHHHHHHHHHHHHEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKRILFSLLLAASLSAEAQTQTYETEFARPLNEVLTDIQNRFGIRLKYDIDTVGKILPYA CHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHCCCC DFRIRPYSVEESLTNVLSPFDYKFVRQSGNLYKLKAYEYPRRTDADGEKMLAYLNTLYAD CCEECCCCHHHHHHHHHCCCHHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHCC KQAFELRADSLRKEVRQRLGIDTLLAQCVNSTPILSKIRKFDGYTVQNFALETLPGLYVC HHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHCCCCEEE GSVYTPQSKGKHALIICPNGHFGGGRYREDQQQRMGTLARMGAVCVDYDLFGWGESILQV CCEECCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCHHHEECCHHHCCHHHHHH GSTAHRSSAAHTIQAMNGLLILDYMLASRKDIDTKRIGANGGSGGGTHTVLLTTLDDRFT CCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHCCCCCCCCCCCEEEEEEECCCCCC ASAPVVSLASHFDGGCPCESGMPIQLSAGGTCNAELAATFAPRPQLVVSDGGDWTASVPA CCCHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCEEEECCCCCEEEECCCCCEECCCC LEFPYLQRIYGFYDAKDNVTNVHLPKEKHDFGPNKRNAVYDFFAEVFDLDKKMLDESKVT CCCHHHHHHHHHHCCCCCCEEEECCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEE IEPESAMYSFGEKGELLPENAIRSFDKVAAYFDKKAFAKLKSDASLEKKAMEWVASLNLD ECCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCC DEKKSGFAVTTIYNHLRQVRDWHNDHPYTTIPAGINPTTGKPLTQLEREIIADSAMPKEV CCCCCCEEHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCHHHHHHHHHHHCCCCCHHH HERLMKGLRRVLTEEQVEQILDKYTVGKVAFTMKGYQEIVPDMTEEETAFILEQLKLARE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH QAVDYKSMKQISAIFKAYKTKIELYFYEHGRNWRQMYKDYAEKRKAEKAKEGK HHHCHHHHHHHHHHHHHHHHEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA