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The map label for this gene is gntX

Identifier: 29144264

GI number: 29144264

Start: 4145847

End: 4146530

Strand: Reverse

Name: gntX

Synonym: t3996

Alternate gene names: 29144264

Gene position: 4146530-4145847 (Counterclockwise)

Preceding gene: 29144266

Following gene: 29144263

Centisome position: 86.53

GC content: 59.21

Gene sequence:

>684_bases
ATGCTAACAGTACCGGGATTATGCTGGCTATGCCGAATGCCGCTGGCGTTAAGCCACTGGGGGATTTGCTCCGTATGCGC
GCGCGCCGTTCGTCAGCGCGTCAGCCTGTGTCCGCAATGCGGATTACCTGCCGGGCATCCTTCGCTCCCCTGCGGTCGCT
GCCTGCAAAAACCGCCGCCCTGGCAGCGTCTGGTGAGCGTCAGTGACTATACGCCGCCCTTGAGTTTACTGGTGCATCAG
CTTAAATTTACCCGCCGCAGCGAAATTGCCGCCGCTCTGGCGCGTCTACTGTTGCAGGAAGTACTTATGGCGCGCCGCAG
CACTGGCTTGCCGCTTCCCGACAGAATCGTCAGCGTTCCGCTCTGGTCGCGCCGACACTGGCGGCGGGGATTTAACCAAA
GCGATCTGTTATGCCAACCGTTAGCGCACTGGCTGGGCTGCGCGTGGGACAGCCAGACCATCACGCGGGTACGGGCGACC
GCAACACAACATCATCTCAGCGCCAGGTTACGTAAGCGCAATTTGAAAAACGCGTTTCGCCTTGAATTGCCGGTACAGGG
TCTCCATATGGTTATTGTGGATGATGTCGTCACTACCGGAAGTACCGTCGCGGAAATCGCGCAACTGCTTTTGCGCAACG
GCGCAGCGACTGTCCAGGTATGGTGCCTGTGTCGAACCTTGTAG

Upstream 100 bases:

>100_bases
TCCGTGCAGCAGCACAAGATGACAATTTCCCTCGCCGTAGGTCTGCCACCAGATGTCATTCATCAGTTACTGTTCTCTTT
TGTCTAACAAGGATGCACCT

Downstream 100 bases:

>100_bases
AGCCTCGATGACGGGCGTATTATAACCAACTAAAATAGTCAACTATTAGGCCATTACTATGATCCGTATTTCCGATGCTG
CACAAGCGCACTTTGCCAAA

Product: gluconate periplasmic binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 227; Mature: 227

Protein sequence:

>227_residues
MLTVPGLCWLCRMPLALSHWGICSVCARAVRQRVSLCPQCGLPAGHPSLPCGRCLQKPPPWQRLVSVSDYTPPLSLLVHQ
LKFTRRSEIAAALARLLLQEVLMARRSTGLPLPDRIVSVPLWSRRHWRRGFNQSDLLCQPLAHWLGCAWDSQTITRVRAT
ATQHHLSARLRKRNLKNAFRLELPVQGLHMVIVDDVVTTGSTVAEIAQLLLRNGAATVQVWCLCRTL

Sequences:

>Translated_227_residues
MLTVPGLCWLCRMPLALSHWGICSVCARAVRQRVSLCPQCGLPAGHPSLPCGRCLQKPPPWQRLVSVSDYTPPLSLLVHQ
LKFTRRSEIAAALARLLLQEVLMARRSTGLPLPDRIVSVPLWSRRHWRRGFNQSDLLCQPLAHWLGCAWDSQTITRVRAT
ATQHHLSARLRKRNLKNAFRLELPVQGLHMVIVDDVVTTGSTVAEIAQLLLRNGAATVQVWCLCRTL
>Mature_227_residues
MLTVPGLCWLCRMPLALSHWGICSVCARAVRQRVSLCPQCGLPAGHPSLPCGRCLQKPPPWQRLVSVSDYTPPLSLLVHQ
LKFTRRSEIAAALARLLLQEVLMARRSTGLPLPDRIVSVPLWSRRHWRRGFNQSDLLCQPLAHWLGCAWDSQTITRVRAT
ATQHHLSARLRKRNLKNAFRLELPVQGLHMVIVDDVVTTGSTVAEIAQLLLRNGAATVQVWCLCRTL

Specific function: Could be involved in gluconate metabolism

COG id: COG1040

COG function: function code R; Predicted amidophosphoribosyltransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ComF/GntX family

Homologues:

Organism=Escherichia coli, GI87082263, Length=227, Percent_Identity=85.0220264317181, Blast_Score=370, Evalue=1e-104,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GNTX_SALTI (Q8Z222)

Other databases:

- EMBL:   AL627281
- EMBL:   AE014613
- RefSeq:   NP_458394.1
- RefSeq:   NP_807606.1
- ProteinModelPortal:   Q8Z222
- GeneID:   1071069
- GeneID:   1250503
- GenomeReviews:   AE014613_GR
- GenomeReviews:   AL513382_GR
- KEGG:   stt:t3996
- KEGG:   sty:STY4286
- HOGENOM:   HBG695777
- OMA:   LHWTRLL
- ProtClustDB:   PRK11595
- BioCyc:   SENT209261:T3996-MONOMER
- BioCyc:   SENT220341:STY4286-MONOMER
- InterPro:   IPR005222
- InterPro:   IPR000836
- TIGRFAMs:   TIGR00201

Pfam domain/function: PF00156 Pribosyltran

EC number: NA

Molecular weight: Translated: 25464; Mature: 25464

Theoretical pI: Translated: 11.22; Mature: 11.22

Prosite motif: PS00103 PUR_PYR_PR_TRANSFER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
5.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTVPGLCWLCRMPLALSHWGICSVCARAVRQRVSLCPQCGLPAGHPSLPCGRCLQKPPP
CCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCC
WQRLVSVSDYTPPLSLLVHQLKFTRRSEIAAALARLLLQEVLMARRSTGLPLPDRIVSVP
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHEECC
LWSRRHWRRGFNQSDLLCQPLAHWLGCAWDSQTITRVRATATQHHLSARLRKRNLKNAFR
CHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHE
LELPVQGLHMVIVDDVVTTGSTVAEIAQLLLRNGAATVQVWCLCRTL
EECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHCC
>Mature Secondary Structure
MLTVPGLCWLCRMPLALSHWGICSVCARAVRQRVSLCPQCGLPAGHPSLPCGRCLQKPPP
CCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCC
WQRLVSVSDYTPPLSLLVHQLKFTRRSEIAAALARLLLQEVLMARRSTGLPLPDRIVSVP
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHEECC
LWSRRHWRRGFNQSDLLCQPLAHWLGCAWDSQTITRVRATATQHHLSARLRKRNLKNAFR
CHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHE
LELPVQGLHMVIVDDVVTTGSTVAEIAQLLLRNGAATVQVWCLCRTL
EECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504