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The map label for this gene is yfcI [H]

Identifier: 29144266

GI number: 29144266

Start: 4147374

End: 4148300

Strand: Reverse

Name: yfcI [H]

Synonym: t3998

Alternate gene names: 29144266

Gene position: 4148300-4147374 (Counterclockwise)

Preceding gene: 29144267

Following gene: 29144264

Centisome position: 86.57

GC content: 52.1

Gene sequence:

>927_bases
ATGGCGACCTCAACAACATCCACGCCGCATGACGCGGTATTCAAACAGTTTTTATGCCACCCCGATACTGCACGGGATTT
TTTGGAAATCCATCTTCCGTCGACATTACGTCAAATCTGTAATCTGAATACGTTACGGCTGGAGTCCGGTAGCTTTATTG
AAGAGGATTTACGCCCCCATTATTCCGATATCCTTTGGTCGCTGGAAACAAGTGAAGGTGACGGTTACATTTACGTGGTT
ATTGAACATCAGAGTACGCCGGACGCGCATATGGCATTTCGGCTGATGCGTTACGCAATGGCTGCAATGCAACGGCACCT
GGAGGCCGGGCATAAGACGTTGCCATTAGTGGTGCCAATGCTGTTTTACCACGGAAACCGAAGCCCGTATCCGTTCTCAT
TATGCTGGCTGGATGAATTTGCCGACCCGGTGATGGCGCGTAAGCTATACGCCACCGCCTTTCCTCTGGTCGATATTACG
GTCGTGCCGGACGACGAGATTATGCGGCACCGACGGGTCGCGCTGCTGGAACTCATACAAAAACACATCCGCCAGCGTGA
TCTGATGGGGCTTGTCGAACAGCTGGTCGCCCTGCTGGTTAAGGGATACGCTAATGACACCCAGCTTCAAAGTCTGTTTA
ATTACATGATGCACACTGGCGACGCCGCGCGCTTCAATACGTTTATCCGCCAGGTGGCTATGCGTATCCCACAGCATAAG
GAGAAGATCATGACTATCGCAGAAAGATTACGTCAGGAAGGACATCGTAACGGGTTACAGAAAGGGCTACAACAAGGCAA
ACAGGAAGGCCAACGGCTCGCCGCATTGCGCATTGCCCGCTCCATGCTAAACGATGGTTTCGATCGCGATACTGTGCTTA
GGGTTACCGGGCTGGCGCCTGCCGATCTGGCGTCTGAAAGCCATTAA

Upstream 100 bases:

>100_bases
TATCTCCCCACGCGCCTCGCAAGCGCACTAATCCTCTACTGCAATCAGCCCGGTCTGCGCGTAGTGTCACGCCATTGAGC
TTCACCGGTGACGGATCGAT

Downstream 100 bases:

>100_bases
TCTGGCAGAATGGCCTGGGCCCGGCAACGCCCTGGTTACAGCGATGATTTTAGCGTCATCAGCGCCTGGCAAAACGCCGC
CGGATGCGAGATAAACGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 308; Mature: 307

Protein sequence:

>308_residues
MATSTTSTPHDAVFKQFLCHPDTARDFLEIHLPSTLRQICNLNTLRLESGSFIEEDLRPHYSDILWSLETSEGDGYIYVV
IEHQSTPDAHMAFRLMRYAMAAMQRHLEAGHKTLPLVVPMLFYHGNRSPYPFSLCWLDEFADPVMARKLYATAFPLVDIT
VVPDDEIMRHRRVALLELIQKHIRQRDLMGLVEQLVALLVKGYANDTQLQSLFNYMMHTGDAARFNTFIRQVAMRIPQHK
EKIMTIAERLRQEGHRNGLQKGLQQGKQEGQRLAALRIARSMLNDGFDRDTVLRVTGLAPADLASESH

Sequences:

>Translated_308_residues
MATSTTSTPHDAVFKQFLCHPDTARDFLEIHLPSTLRQICNLNTLRLESGSFIEEDLRPHYSDILWSLETSEGDGYIYVV
IEHQSTPDAHMAFRLMRYAMAAMQRHLEAGHKTLPLVVPMLFYHGNRSPYPFSLCWLDEFADPVMARKLYATAFPLVDIT
VVPDDEIMRHRRVALLELIQKHIRQRDLMGLVEQLVALLVKGYANDTQLQSLFNYMMHTGDAARFNTFIRQVAMRIPQHK
EKIMTIAERLRQEGHRNGLQKGLQQGKQEGQRLAALRIARSMLNDGFDRDTVLRVTGLAPADLASESH
>Mature_307_residues
ATSTTSTPHDAVFKQFLCHPDTARDFLEIHLPSTLRQICNLNTLRLESGSFIEEDLRPHYSDILWSLETSEGDGYIYVVI
EHQSTPDAHMAFRLMRYAMAAMQRHLEAGHKTLPLVVPMLFYHGNRSPYPFSLCWLDEFADPVMARKLYATAFPLVDITV
VPDDEIMRHRRVALLELIQKHIRQRDLMGLVEQLVALLVKGYANDTQLQSLFNYMMHTGDAARFNTFIRQVAMRIPQHKE
KIMTIAERLRQEGHRNGLQKGLQQGKQEGQRLAALRIARSMLNDGFDRDTVLRVTGLAPADLASESH

Specific function: Unknown

COG id: COG5464

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yadD/yfaD/yhgA/yjiP family [H]

Homologues:

Organism=Escherichia coli, GI1788643, Length=308, Percent_Identity=66.8831168831169, Blast_Score=434, Evalue=1e-123,
Organism=Escherichia coli, GI1788577, Length=305, Percent_Identity=62.6229508196721, Blast_Score=408, Evalue=1e-115,
Organism=Escherichia coli, GI1789816, Length=308, Percent_Identity=61.6883116883117, Blast_Score=399, Evalue=1e-112,
Organism=Escherichia coli, GI1786324, Length=300, Percent_Identity=52.6666666666667, Blast_Score=327, Evalue=7e-91,
Organism=Escherichia coli, GI87082070, Length=65, Percent_Identity=58.4615384615385, Blast_Score=68, Evalue=9e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010106
- InterPro:   IPR006842 [H]

Pfam domain/function: PF04754 Transposase_31 [H]

EC number: NA

Molecular weight: Translated: 35280; Mature: 35149

Theoretical pI: Translated: 7.26; Mature: 7.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATSTTSTPHDAVFKQFLCHPDTARDFLEIHLPSTLRQICNLNTLRLESGSFIEEDLRPH
CCCCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHCCCCEEECCCCHHHHHHCHH
YSDILWSLETSEGDGYIYVVIEHQSTPDAHMAFRLMRYAMAAMQRHLEAGHKTLPLVVPM
HHHHHEEEECCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
LFYHGNRSPYPFSLCWLDEFADPVMARKLYATAFPLVDITVVPDDEIMRHRRVALLELIQ
HHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHH
KHIRQRDLMGLVEQLVALLVKGYANDTQLQSLFNYMMHTGDAARFNTFIRQVAMRIPQHK
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHH
EKIMTIAERLRQEGHRNGLQKGLQQGKQEGQRLAALRIARSMLNDGFDRDTVLRVTGLAP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCC
ADLASESH
HHHCCCCC
>Mature Secondary Structure 
ATSTTSTPHDAVFKQFLCHPDTARDFLEIHLPSTLRQICNLNTLRLESGSFIEEDLRPH
CCCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHCCCCEEECCCCHHHHHHCHH
YSDILWSLETSEGDGYIYVVIEHQSTPDAHMAFRLMRYAMAAMQRHLEAGHKTLPLVVPM
HHHHHEEEECCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
LFYHGNRSPYPFSLCWLDEFADPVMARKLYATAFPLVDITVVPDDEIMRHRRVALLELIQ
HHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHH
KHIRQRDLMGLVEQLVALLVKGYANDTQLQSLFNYMMHTGDAARFNTFIRQVAMRIPQHK
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHH
EKIMTIAERLRQEGHRNGLQKGLQQGKQEGQRLAALRIARSMLNDGFDRDTVLRVTGLAP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCC
ADLASESH
HHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]