Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
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Accession | NC_004631 |
Length | 4,791,961 |
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The map label for this gene is uhpB [H]
Identifier: 29144020
GI number: 29144020
Start: 3843732
End: 3845234
Strand: Direct
Name: uhpB [H]
Synonym: t3729
Alternate gene names: 29144020
Gene position: 3843732-3845234 (Clockwise)
Preceding gene: 29144019
Following gene: 29144021
Centisome position: 80.21
GC content: 61.94
Gene sequence:
>1503_bases ATGAACACCTTTTTTTCCCGTTTAATCACCGTTGTTGCCTGCTTTTTTATCTTCTCCGCCGCGTGGTTCTGCCTGTGGAG CATCAGCCTGCATCTGGTAGAGCGCCCGGAGCTGGCGGCGCTACTCTTTCCCTTCGGCCTGCGCCTGGGACTTATGCTGC AATGCCCGCGCGGATACTGGCCAGTATTGCTGGGCGCGGAGTGGCTGCTGGTGTACTGGTTGGCGCAGGAAGTTGCGCTG GCCCATCTGCCGCTTTTGATGATCGGTGGTGTGTTGACGCTACTGCCCGTGGCGCTGACTTCTCGTTACCGCCATCAGCG CGACTGGCGCACGTTATTGCTTCAGGGCGCGGCCCTCACCGCCGCGGCGCTACTGCAATCCCTGCCCTGGCTGGGGCAGG GGGAAGCGGCATGGAACGCGCTACTGCTGACCCTCACGGGGGGACTGACGCTGGCCCCCATCTGCCTGGTTTTCTGGCAC TATCTCACCAGCACTACCTGGCTGCCGCTGGGACCATCGCTGGTATCGCAGCCGGTAAACTGGCGCGGGCGGCATCTGAT CTGGTATCTGCTGCTGTTTATCGTCAGTCTGTGGCTGCAACTGGGGTTACCTGCTGAACTTTCGCGCTTCACGCCGTTCT GCCTGGCGTTGCCGATTATCGCGCTCGCCTGGCATTATGGCTGGCAGGGCGCGCTCATTGCCACACTGATGAACGCTATC GCGCTGATCGCCAGCCAGACCTGGCACGATCATCCCGTCGATTTATTACTTTCGCTGTTGGCGCAAAGCCTGACCGGGCT ACTGCTTGGCGCGGGCATTCAGCGCCTGCGCGAGCTGAACCAGTCGCTGCAAAAGGAGCTGGCGCGCAACCATCGGCTGG CGGAGCGTCTTCTGGAGACCGAAGAGAGCGTACGGCGCGATGTTGCGCGTGAGCTGCACGATGACATCGGACAGACCATC ACCGCGATTCGAACCCTGGCGGGCATTGTGCAACGACTGGCGGCGGATAACGGCGGCGTGAAGCAGAGCGGGCAACTTAT CGAGCAGCTTTCGCTGGGCGTGTATGACGCCGTGCGTCGCCTGCTGGGGCGCTTGCGCCCGCGCCAGCTAGACGACTTAA CGCTGGCGCAGGCCATCCGTTCGCTGCTGCGCGAAATGGAGCTGGAAAGCCGCGGTATTGTCAGTCACCTCGACTGGCGA ATTGACGAAACGGCGCTAAGTGAAAGTCAGCGCGTGACGCTGTTTCGCGTCTGTCAGGAAGGGCTGAATAACATCGTAAA ACATGCCAATGCCAGCGCGGTGACGCTCCAGGGCTGGCAGCAGGATGAGCGGCTGATGCTGGTGATTGAGGATGACGGCA GCGGCCTGCCGCCGGGCTCTCACCAGCAGGGCTTCGGCCTGACCGGAATGCGCGAACGCGTGTCGGCGCTCGGCGGGACG CTAACCATCTCTTGTACCCACGGTACGCGGGTGAGCGTCTCGTTGCCCCAGCGTTACGTTTAA
Upstream 100 bases:
>100_bases TGTCGCCAAAAATGGTGCATGTCCATCGCGCGAATCTGCTGGAAAAATTAGGCGTCAGCAATGACGTTGAACTGGCGCAT CGCATGTTTGACGGTTGGTA
Downstream 100 bases:
>100_bases GGAAGGATAATGCTTTCGTTTTTAAAAGCCCCGGCCAACGCGCCGCTCATCACCGATAAGCACGAGGTTGACGCCCGCTA TCGCTACTGGCGGCGGTATA
Product: sensory histidine kinase UhpB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 500; Mature: 500
Protein sequence:
>500_residues MNTFFSRLITVVACFFIFSAAWFCLWSISLHLVERPELAALLFPFGLRLGLMLQCPRGYWPVLLGAEWLLVYWLAQEVAL AHLPLLMIGGVLTLLPVALTSRYRHQRDWRTLLLQGAALTAAALLQSLPWLGQGEAAWNALLLTLTGGLTLAPICLVFWH YLTSTTWLPLGPSLVSQPVNWRGRHLIWYLLLFIVSLWLQLGLPAELSRFTPFCLALPIIALAWHYGWQGALIATLMNAI ALIASQTWHDHPVDLLLSLLAQSLTGLLLGAGIQRLRELNQSLQKELARNHRLAERLLETEESVRRDVARELHDDIGQTI TAIRTLAGIVQRLAADNGGVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLAQAIRSLLREMELESRGIVSHLDWR IDETALSESQRVTLFRVCQEGLNNIVKHANASAVTLQGWQQDERLMLVIEDDGSGLPPGSHQQGFGLTGMRERVSALGGT LTISCTHGTRVSVSLPQRYV
Sequences:
>Translated_500_residues MNTFFSRLITVVACFFIFSAAWFCLWSISLHLVERPELAALLFPFGLRLGLMLQCPRGYWPVLLGAEWLLVYWLAQEVAL AHLPLLMIGGVLTLLPVALTSRYRHQRDWRTLLLQGAALTAAALLQSLPWLGQGEAAWNALLLTLTGGLTLAPICLVFWH YLTSTTWLPLGPSLVSQPVNWRGRHLIWYLLLFIVSLWLQLGLPAELSRFTPFCLALPIIALAWHYGWQGALIATLMNAI ALIASQTWHDHPVDLLLSLLAQSLTGLLLGAGIQRLRELNQSLQKELARNHRLAERLLETEESVRRDVARELHDDIGQTI TAIRTLAGIVQRLAADNGGVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLAQAIRSLLREMELESRGIVSHLDWR IDETALSESQRVTLFRVCQEGLNNIVKHANASAVTLQGWQQDERLMLVIEDDGSGLPPGSHQQGFGLTGMRERVSALGGT LTISCTHGTRVSVSLPQRYV >Mature_500_residues MNTFFSRLITVVACFFIFSAAWFCLWSISLHLVERPELAALLFPFGLRLGLMLQCPRGYWPVLLGAEWLLVYWLAQEVAL AHLPLLMIGGVLTLLPVALTSRYRHQRDWRTLLLQGAALTAAALLQSLPWLGQGEAAWNALLLTLTGGLTLAPICLVFWH YLTSTTWLPLGPSLVSQPVNWRGRHLIWYLLLFIVSLWLQLGLPAELSRFTPFCLALPIIALAWHYGWQGALIATLMNAI ALIASQTWHDHPVDLLLSLLAQSLTGLLLGAGIQRLRELNQSLQKELARNHRLAERLLETEESVRRDVARELHDDIGQTI TAIRTLAGIVQRLAADNGGVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLAQAIRSLLREMELESRGIVSHLDWR IDETALSESQRVTLFRVCQEGLNNIVKHANASAVTLQGWQQDERLMLVIEDDGSGLPPGSHQQGFGLTGMRERVSALGGT LTISCTHGTRVSVSLPQRYV
Specific function: Member of the two-component regulatory system uhpB/uhpA involved in the regulation of the uptake of hexose phosphates. UhpB functions as a membrane-associated protein kinase that phosphorylates uhpA in response to environmental signals [H]
COG id: COG3851
COG function: function code T; Signal transduction histidine kinase, glucose-6-phosphate specific
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI87082311, Length=500, Percent_Identity=90.8, Blast_Score=811, Evalue=0.0, Organism=Escherichia coli, GI1788812, Length=210, Percent_Identity=32.3809523809524, Blast_Score=80, Evalue=4e-16, Organism=Escherichia coli, GI1787474, Length=219, Percent_Identity=26.4840182648402, Blast_Score=65, Evalue=8e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR007895 - InterPro: IPR011712 - InterPro: IPR005467 [H]
Pfam domain/function: PF02518 HATPase_c; PF07730 HisKA_3; PF05231 MASE1 [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 55789; Mature: 55789
Theoretical pI: Translated: 8.10; Mature: 8.10
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTFFSRLITVVACFFIFSAAWFCLWSISLHLVERPELAALLFPFGLRLGLMLQCPRGYW CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHEECCCCCC PVLLGAEWLLVYWLAQEVALAHLPLLMIGGVLTLLPVALTSRYRHQRDWRTLLLQGAALT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAALLQSLPWLGQGEAAWNALLLTLTGGLTLAPICLVFWHYLTSTTWLPLGPSLVSQPVN HHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCC WRGRHLIWYLLLFIVSLWLQLGLPAELSRFTPFCLALPIIALAWHYGWQGALIATLMNAI CCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHH ALIASQTWHDHPVDLLLSLLAQSLTGLLLGAGIQRLRELNQSLQKELARNHRLAERLLET HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EESVRRDVARELHDDIGQTITAIRTLAGIVQRLAADNGGVKQSGQLIEQLSLGVYDAVRR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHH LLGRLRPRQLDDLTLAQAIRSLLREMELESRGIVSHLDWRIDETALSESQRVTLFRVCQE HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHCCCHHHHHHHHHHH GLNNIVKHANASAVTLQGWQQDERLMLVIEDDGSGLPPGSHQQGFGLTGMRERVSALGGT HHHHHHHHCCCCEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHCCCC LTISCTHGTRVSVSLPQRYV EEEEECCCCEEEECCCCCCC >Mature Secondary Structure MNTFFSRLITVVACFFIFSAAWFCLWSISLHLVERPELAALLFPFGLRLGLMLQCPRGYW CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHEECCCCCC PVLLGAEWLLVYWLAQEVALAHLPLLMIGGVLTLLPVALTSRYRHQRDWRTLLLQGAALT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAALLQSLPWLGQGEAAWNALLLTLTGGLTLAPICLVFWHYLTSTTWLPLGPSLVSQPVN HHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCC WRGRHLIWYLLLFIVSLWLQLGLPAELSRFTPFCLALPIIALAWHYGWQGALIATLMNAI CCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHH ALIASQTWHDHPVDLLLSLLAQSLTGLLLGAGIQRLRELNQSLQKELARNHRLAERLLET HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EESVRRDVARELHDDIGQTITAIRTLAGIVQRLAADNGGVKQSGQLIEQLSLGVYDAVRR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHH LLGRLRPRQLDDLTLAQAIRSLLREMELESRGIVSHLDWRIDETALSESQRVTLFRVCQE HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHCCCHHHHHHHHHHH GLNNIVKHANASAVTLQGWQQDERLMLVIEDDGSGLPPGSHQQGFGLTGMRERVSALGGT HHHHHHHHCCCCEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHCCCC LTISCTHGTRVSVSLPQRYV EEEEECCCCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 3301805; 1569007; 7686882; 9278503 [H]