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The map label for this gene is bdlA [H]

Identifier: 29143403

GI number: 29143403

Start: 3142008

End: 3143063

Strand: Reverse

Name: bdlA [H]

Synonym: t3059

Alternate gene names: 29143403

Gene position: 3143063-3142008 (Counterclockwise)

Preceding gene: 29143404

Following gene: 29143399

Centisome position: 65.59

GC content: 42.71

Gene sequence:

>1056_bases
ATGTTTAAAAAAGTATTAGGCTTGCGCCACTGGAATAATAATGTTGTAAAAATACCGCCGCCAGCAGAATCTGGCGCTAA
TGCGTCTGACGTGGTGGTGGATACTCCTGAGCCTTATGAGCGGATACTGTGTCAAAAAATTCTGATGGGGATCTCGACGA
TCGATATCATTCGTAATGCCATCATTAAGTCCTGTGAGCAGCTCAATATTGAAAAAGAACGCATTAATGAACTTAACGAA
CAGAATGATAAAGCCAGAAGTTCATTAAAATCGCTCGTGGAATTTATCACCGAAATTGGCACGACTTCATCAGATATTGG
CTGTCGTATGGGCGACTTAAATACCTCCTTAACGCAAATTAATGCGTGTATTAAAGAGATACAGAAGATCGCTAACCAGA
CCAATTTGATAGCGATTAACTCCGCGATCGAGGCCGCGCGCGTAGGGGATGCCGGGCGTGGTTTTAGCGTTATTTCGAAA
GAAGTGAAAAACCTGTCCGAAGATGTTAAACACAGTTCGAAAAGCGTCAGTACGTTAACCTCTGTAATCAAAGATAATAC
GGCCAGAGTGAGTGAGGTGCTGGATAACCAACAGCCGGTTATTGATAATATTACGACTAACATAAATCAAATTGTGGAGT
CTATTGGCATCGTCATTGATAAATCGCTGAGCATGAAATCGGTCATGCAGTACATCTCTACGGTGCAGTTTTTGAATATT
GTCAAAGTTGACCATGTTATCTGGAAAATGGAAGTCTACAAATTACTCTTAAATAAAGACATAAACAGTAAAATAACGAT
GCACGATCAGTGTCGGCTGGGGAAATGGTACTACGGTTTTGAAGGGCAGCAGTTTAGCAATTACTACAGTTTCCGTAGTC
TGGAAGCGCCGCATAAAGAGGTGCATACCGCTGGTCACTCTGCGCTGAACTATTTTGCCGCAGGCGATATGAATGCGATG
TCGCAAGAACTCGACAGAATGGAGCGATCCAGTAATGAGGTGGTTAACCAGCTGGAAATGCTGGCTGTCGATTTGTTAAA
AGAAACCACAGTGTGA

Upstream 100 bases:

>100_bases
ATGGCAGATGACAGCCGATTTTTCATTATGTTAGCATGAGTTGATAATACTTTATCCAGGCATAGATCAGGATGTCCACA
TATAATAAGGAGAATGGTAT

Downstream 100 bases:

>100_bases
AGTCATGAGTTATTACCGTATAACCAACAGGAGCCATCATCAACAGGACTGATGTATCACACTTTCTGCACTGGAGTTAT
TCCGGACAGAGAAAAAAAGC

Product: hypothetical protein

Products: NA

Alternate protein names: Chemotaxis regulator BdlA [H]

Number of amino acids: Translated: 351; Mature: 351

Protein sequence:

>351_residues
MFKKVLGLRHWNNNVVKIPPPAESGANASDVVVDTPEPYERILCQKILMGISTIDIIRNAIIKSCEQLNIEKERINELNE
QNDKARSSLKSLVEFITEIGTTSSDIGCRMGDLNTSLTQINACIKEIQKIANQTNLIAINSAIEAARVGDAGRGFSVISK
EVKNLSEDVKHSSKSVSTLTSVIKDNTARVSEVLDNQQPVIDNITTNINQIVESIGIVIDKSLSMKSVMQYISTVQFLNI
VKVDHVIWKMEVYKLLLNKDINSKITMHDQCRLGKWYYGFEGQQFSNYYSFRSLEAPHKEVHTAGHSALNYFAAGDMNAM
SQELDRMERSSNEVVNQLEMLAVDLLKETTV

Sequences:

>Translated_351_residues
MFKKVLGLRHWNNNVVKIPPPAESGANASDVVVDTPEPYERILCQKILMGISTIDIIRNAIIKSCEQLNIEKERINELNE
QNDKARSSLKSLVEFITEIGTTSSDIGCRMGDLNTSLTQINACIKEIQKIANQTNLIAINSAIEAARVGDAGRGFSVISK
EVKNLSEDVKHSSKSVSTLTSVIKDNTARVSEVLDNQQPVIDNITTNINQIVESIGIVIDKSLSMKSVMQYISTVQFLNI
VKVDHVIWKMEVYKLLLNKDINSKITMHDQCRLGKWYYGFEGQQFSNYYSFRSLEAPHKEVHTAGHSALNYFAAGDMNAM
SQELDRMERSSNEVVNQLEMLAVDLLKETTV
>Mature_351_residues
MFKKVLGLRHWNNNVVKIPPPAESGANASDVVVDTPEPYERILCQKILMGISTIDIIRNAIIKSCEQLNIEKERINELNE
QNDKARSSLKSLVEFITEIGTTSSDIGCRMGDLNTSLTQINACIKEIQKIANQTNLIAINSAIEAARVGDAGRGFSVISK
EVKNLSEDVKHSSKSVSTLTSVIKDNTARVSEVLDNQQPVIDNITTNINQIVESIGIVIDKSLSMKSVMQYISTVQFLNI
VKVDHVIWKMEVYKLLLNKDINSKITMHDQCRLGKWYYGFEGQQFSNYYSFRSLEAPHKEVHTAGHSALNYFAAGDMNAM
SQELDRMERSSNEVVNQLEMLAVDLLKETTV

Specific function: Essential for biofilm dispersion by sensing environmental cues. May be involved in sensing and transducing signals within cells, resulting in the modulation of c-di-GMP levels, swimming motility and adhesiveness of the bacterial cell surface [H]

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 PAS (PER-ARNT-SIM) domains [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=111, Percent_Identity=35.1351351351351, Blast_Score=69, Evalue=6e-13,
Organism=Escherichia coli, GI1787690, Length=155, Percent_Identity=29.6774193548387, Blast_Score=68, Evalue=1e-12,
Organism=Escherichia coli, GI1788195, Length=111, Percent_Identity=35.1351351351351, Blast_Score=66, Evalue=3e-12,
Organism=Escherichia coli, GI1788194, Length=126, Percent_Identity=31.7460317460317, Blast_Score=65, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013656
- InterPro:   IPR013655 [H]

Pfam domain/function: PF00015 MCPsignal; PF08447 PAS_3; PF08448 PAS_4 [H]

EC number: NA

Molecular weight: Translated: 39299; Mature: 39299

Theoretical pI: Translated: 6.18; Mature: 6.18

Prosite motif: PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKKVLGLRHWNNNVVKIPPPAESGANASDVVVDTPEPYERILCQKILMGISTIDIIRNA
CCHHHHHHHCCCCCEEECCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHH
IIKSCEQLNIEKERINELNEQNDKARSSLKSLVEFITEIGTTSSDIGCRMGDLNTSLTQI
HHHHHHHCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHH
NACIKEIQKIANQTNLIAINSAIEAARVGDAGRGFSVISKEVKNLSEDVKHSSKSVSTLT
HHHHHHHHHHHCCCCEEEEHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
SVIKDNTARVSEVLDNQQPVIDNITTNINQIVESIGIVIDKSLSMKSVMQYISTVQFLNI
HHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
VKVDHVIWKMEVYKLLLNKDINSKITMHDQCRLGKWYYGFEGQQFSNYYSFRSLEAPHKE
HHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCEEECCCCCHHHHHHHHHCCCCCHHH
VHTAGHSALNYFAAGDMNAMSQELDRMERSSNEVVNQLEMLAVDLLKETTV
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFKKVLGLRHWNNNVVKIPPPAESGANASDVVVDTPEPYERILCQKILMGISTIDIIRNA
CCHHHHHHHCCCCCEEECCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHH
IIKSCEQLNIEKERINELNEQNDKARSSLKSLVEFITEIGTTSSDIGCRMGDLNTSLTQI
HHHHHHHCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHH
NACIKEIQKIANQTNLIAINSAIEAARVGDAGRGFSVISKEVKNLSEDVKHSSKSVSTLT
HHHHHHHHHHHCCCCEEEEHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
SVIKDNTARVSEVLDNQQPVIDNITTNINQIVESIGIVIDKSLSMKSVMQYISTVQFLNI
HHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
VKVDHVIWKMEVYKLLLNKDINSKITMHDQCRLGKWYYGFEGQQFSNYYSFRSLEAPHKE
HHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCEEECCCCCHHHHHHHHHCCCCCHHH
VHTAGHSALNYFAAGDMNAMSQELDRMERSSNEVVNQLEMLAVDLLKETTV
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]