Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
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Accession | NC_004631 |
Length | 4,791,961 |
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The map label for this gene is gsp [H]
Identifier: 29143404
GI number: 29143404
Start: 3143733
End: 3145589
Strand: Reverse
Name: gsp [H]
Synonym: t3060
Alternate gene names: 29143404
Gene position: 3145589-3143733 (Counterclockwise)
Preceding gene: 29143406
Following gene: 29143403
Centisome position: 65.64
GC content: 53.31
Gene sequence:
>1857_bases ATGAGCAAAGGAACCACCAGTCAGGATGCCCCCTTCGGGACATTATTGGGTTACGCCCCCGGCGGCGTAGCGATCTACTC TTCAGATTACAATTCCCTCGATCCGTGGGACGACGACGACGCAGCTTTTCGTAGCTACATCGACGATGAATACATGGGGC ATAAATGGCAGTGCGTGGAATTTGCCCGCCGTTTTCTCTTTCTGAATTATGGCGTTGTTTTTACTGACGTCGGCATGGCC TGGGAAATTTTCTCGCTGCGTTTTCTGCGCGAGGTCGTGAATGACAATATTTTGCCTTTGCAGGCCTTCCCGAACGGTTC GCCGCGCGCGCCGGAGGCCGGGGCGTTGCTCATCTGGCAAAAGGGCGGCGAGTTTAACGAAACCGGGCACGTCGCGATTA TCACCCAACTCCTGGATAACAAAATTCGCATTGCTGAGCAAAACGTTATCCACACGCCATTGCCGCCAGGGCAGCAGTGG ACTCGCGAACTGGAAATGGTCGTAGAAAACGGGTGTTACACCCTGCGCGACACCTTTGATGACACGACGATTTTAGGCTG GATGATCCAGACCGACGACACGCAATACAGTTTGTCACAGCCTGACATCGCGAATCAGTCGCTGGCGATTCGCGGCGCAA GGCTGCCAGAGAAAGGTCAGTTTGACGGTCAGTGGCTGGATGAGCGCGATCCGTTACAAAAAGCCTATGTACAGGCGAAC GGACACGTTATCAATCAGGACCCGTACCAGTATTTTACCATCACCGAGAGCGCCGAACAGGAGCTTATCAAAGCGACCAA TGAGTTGCATTTGATGTACCTGCACGCCACGGACAAAGTTTTAAAAGACGATAATCTGCTGGCGCTATTCGATATCCCCA AAATTCTTTGGCCGCGCCTGCGTCTCTCCTGGCAGCGCCGTCGTCACCATATGATCACCGGTCGTATGGATTTCTGCATG GATGAACGCGGGCTGAAAGTCTATGAATACAATGCCGATTCCGCATCATGCCATACCGAAGCGGGATTAATTCTCGAAAA ATGGGCTGAGCAGGGCTATACCGGTAAAGGGCATAACCCGGCGGAGGGCTTAATTAACGAGCTGGCAGGCGCCTGGAAAC ACAGTAAAGCGCGTCCTTTCGTCCATATCATGCAGGATGATGATATCGAGGAGGACTATCACGCGCAGTTTATGCAGCAG GCGCTGCATCAGGCCGGTTTCGCGAGCAAAATTCTCCGCGGGCTGGGCGAGTTGCGCTGGGATGACGCCGGGCAGTTGAT CGATGGCGACGGACGGCTGGTGAATTGTGTCTGGAAAACCTGGGCGTGGGAAACGGCAATGGAGCAGATACGCGAAGTCA GCGAGACGGAGTATGCCGCAGTGCCTATTCGTACCGGGCACCCGGAAAATGAAGTCCGGCTGATTGATGTATTACTGCGC CCGGAAGTGTTGGTGTTTGAACCGCTGTGGACGGTGATCCCGGGTAACAAAGCGATCCTGCCCATCCTGTGGTCGCTCTT CCCACATCATCGCTATTTGCTCGACACGGATTTTACCGTTAACGATGAGCTGGTGCAGACCGGCTATGCGGTAAAACCGA TTGCCGGACGTTGCGGTAGTAATATTGATTTGGTGAGCCATCAGGAAGAACTCCTGGATAAAACCAGCGGCAAGTTCGCC ACGCAGAAAAATATCTATCAGCAGTTGTGGTGCCTGCCGAAGGTCGCCGGGAAGTATATTCAGGTCTGTACGTTTACCGT GGGCGGTAACTACGGCGGTACGTGCCTGCGCGGCGATGATTCATTAGTCATTAAAAAAGAGAGCGATATTGAACCGTTAA TCGTCATCAAAGCGTAA
Upstream 100 bases:
>100_bases GTATGATTATGTCGACCTCTGTCCGGTTAGTGTCACAGAGCAGACAATCAGAGCGAAATCACGCCAGGCTGCTCAGGCGG TCTTGTTTTGAGGTAAGTGC
Downstream 100 bases:
>100_bases CGGGGTCATTCTCGTCGGGATATCGGCGTTGGCGCCGATATCCCGCCTGTTGTGTTTACCAACGAACGGCTGTCAGCTTG CCATTTACTGGTAACATATG
Product: bifunctional glutathionylspermidine amidase/glutathionylspermidine synthetase
Products: NA
Alternate protein names: Glutathionylspermidine synthase; GSP synthetase; Glutathione:spermidine ligase [ADP-forming]; Glutathionylspermidine amidase; Glutathionylspermidine amidohydrolase [spermidine-forming]; GSP amidase [H]
Number of amino acids: Translated: 618; Mature: 617
Protein sequence:
>618_residues MSKGTTSQDAPFGTLLGYAPGGVAIYSSDYNSLDPWDDDDAAFRSYIDDEYMGHKWQCVEFARRFLFLNYGVVFTDVGMA WEIFSLRFLREVVNDNILPLQAFPNGSPRAPEAGALLIWQKGGEFNETGHVAIITQLLDNKIRIAEQNVIHTPLPPGQQW TRELEMVVENGCYTLRDTFDDTTILGWMIQTDDTQYSLSQPDIANQSLAIRGARLPEKGQFDGQWLDERDPLQKAYVQAN GHVINQDPYQYFTITESAEQELIKATNELHLMYLHATDKVLKDDNLLALFDIPKILWPRLRLSWQRRRHHMITGRMDFCM DERGLKVYEYNADSASCHTEAGLILEKWAEQGYTGKGHNPAEGLINELAGAWKHSKARPFVHIMQDDDIEEDYHAQFMQQ ALHQAGFASKILRGLGELRWDDAGQLIDGDGRLVNCVWKTWAWETAMEQIREVSETEYAAVPIRTGHPENEVRLIDVLLR PEVLVFEPLWTVIPGNKAILPILWSLFPHHRYLLDTDFTVNDELVQTGYAVKPIAGRCGSNIDLVSHQEELLDKTSGKFA TQKNIYQQLWCLPKVAGKYIQVCTFTVGGNYGGTCLRGDDSLVIKKESDIEPLIVIKA
Sequences:
>Translated_618_residues MSKGTTSQDAPFGTLLGYAPGGVAIYSSDYNSLDPWDDDDAAFRSYIDDEYMGHKWQCVEFARRFLFLNYGVVFTDVGMA WEIFSLRFLREVVNDNILPLQAFPNGSPRAPEAGALLIWQKGGEFNETGHVAIITQLLDNKIRIAEQNVIHTPLPPGQQW TRELEMVVENGCYTLRDTFDDTTILGWMIQTDDTQYSLSQPDIANQSLAIRGARLPEKGQFDGQWLDERDPLQKAYVQAN GHVINQDPYQYFTITESAEQELIKATNELHLMYLHATDKVLKDDNLLALFDIPKILWPRLRLSWQRRRHHMITGRMDFCM DERGLKVYEYNADSASCHTEAGLILEKWAEQGYTGKGHNPAEGLINELAGAWKHSKARPFVHIMQDDDIEEDYHAQFMQQ ALHQAGFASKILRGLGELRWDDAGQLIDGDGRLVNCVWKTWAWETAMEQIREVSETEYAAVPIRTGHPENEVRLIDVLLR PEVLVFEPLWTVIPGNKAILPILWSLFPHHRYLLDTDFTVNDELVQTGYAVKPIAGRCGSNIDLVSHQEELLDKTSGKFA TQKNIYQQLWCLPKVAGKYIQVCTFTVGGNYGGTCLRGDDSLVIKKESDIEPLIVIKA >Mature_617_residues SKGTTSQDAPFGTLLGYAPGGVAIYSSDYNSLDPWDDDDAAFRSYIDDEYMGHKWQCVEFARRFLFLNYGVVFTDVGMAW EIFSLRFLREVVNDNILPLQAFPNGSPRAPEAGALLIWQKGGEFNETGHVAIITQLLDNKIRIAEQNVIHTPLPPGQQWT RELEMVVENGCYTLRDTFDDTTILGWMIQTDDTQYSLSQPDIANQSLAIRGARLPEKGQFDGQWLDERDPLQKAYVQANG HVINQDPYQYFTITESAEQELIKATNELHLMYLHATDKVLKDDNLLALFDIPKILWPRLRLSWQRRRHHMITGRMDFCMD ERGLKVYEYNADSASCHTEAGLILEKWAEQGYTGKGHNPAEGLINELAGAWKHSKARPFVHIMQDDDIEEDYHAQFMQQA LHQAGFASKILRGLGELRWDDAGQLIDGDGRLVNCVWKTWAWETAMEQIREVSETEYAAVPIRTGHPENEVRLIDVLLRP EVLVFEPLWTVIPGNKAILPILWSLFPHHRYLLDTDFTVNDELVQTGYAVKPIAGRCGSNIDLVSHQEELLDKTSGKFAT QKNIYQQLWCLPKVAGKYIQVCTFTVGGNYGGTCLRGDDSLVIKKESDIEPLIVIKA
Specific function: Catalyzes the formation of an amide bond between glutathione and spermidine coupled with hydrolysis of ATP; also catalyzes the hydrolysis of glutathionylspermidine to glutathione and spermidine [H]
COG id: COG0754
COG function: function code E; Glutathionylspermidine synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 peptidase C51 domain [H]
Homologues:
Organism=Escherichia coli, GI1789361, Length=618, Percent_Identity=90.1294498381877, Blast_Score=1167, Evalue=0.0, Organism=Escherichia coli, GI1789416, Length=395, Percent_Identity=26.5822784810127, Blast_Score=132, Evalue=1e-31, Organism=Escherichia coli, GI1790629, Length=384, Percent_Identity=26.5625, Blast_Score=122, Evalue=9e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007921 - InterPro: IPR005494 - InterPro: IPR016185 [H]
Pfam domain/function: PF05257 CHAP; PF03738 GSP_synth [H]
EC number: =6.3.1.8; =3.5.1.78 [H]
Molecular weight: Translated: 70241; Mature: 70110
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: PS50911 CHAP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKGTTSQDAPFGTLLGYAPGGVAIYSSDYNSLDPWDDDDAAFRSYIDDEYMGHKWQCVE CCCCCCCCCCCCHHHEECCCCCEEEEECCCCCCCCCCCCHHHHHHHCCHHHCCCCHHHHH FARRFLFLNYGVVFTDVGMAWEIFSLRFLREVVNDNILPLQAFPNGSPRAPEAGALLIWQ HHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCEEEEEE KGGEFNETGHVAIITQLLDNKIRIAEQNVIHTPLPPGQQWTRELEMVVENGCYTLRDTFD CCCCCCCCCCCEEEEHHHCCCEEEECCCEEECCCCCCHHHHHHHHHHHHCCCEEEECCCC DTTILGWMIQTDDTQYSLSQPDIANQSLAIRGARLPEKGQFDGQWLDERDPLQKAYVQAN CCEEEEEEEECCCCEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHCC GHVINQDPYQYFTITESAEQELIKATNELHLMYLHATDKVLKDDNLLALFDIPKILWPRL CEEECCCCCEEEEECCHHHHHHHHCCCCEEEEEEECCCCEECCCCEEEEECCHHHHHHHH RLSWQRRRHHMITGRMDFCMDERGLKVYEYNADSASCHTEAGLILEKWAEQGYTGKGHNP HHHHHHHHHHEEECCHHHHCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHCCCCCCCCCH AEGLINELAGAWKHSKARPFVHIMQDDDIEEDYHAQFMQQALHQAGFASKILRGLGELRW HHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCC DDAGQLIDGDGRLVNCVWKTWAWETAMEQIREVSETEYAAVPIRTGHPENEVRLIDVLLR CCCCCEECCCCCEEEEEHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCEEEEEEECC PEVLVFEPLWTVIPGNKAILPILWSLFPHHRYLLDTDFTVNDELVQTGYAVKPIAGRCGS CCEEEECCHHEECCCCCCHHHHHHHHCCCCEEEEECCCCCCHHHHHCCCCCCCCHHCCCC NIDLVSHQEELLDKTSGKFATQKNIYQQLWCLPKVAGKYIQVCTFTVGGNYGGTCLRGDD CCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCEEEECCC SLVIKKESDIEPLIVIKA CEEEEECCCCCCEEEEEC >Mature Secondary Structure SKGTTSQDAPFGTLLGYAPGGVAIYSSDYNSLDPWDDDDAAFRSYIDDEYMGHKWQCVE CCCCCCCCCCCHHHEECCCCCEEEEECCCCCCCCCCCCHHHHHHHCCHHHCCCCHHHHH FARRFLFLNYGVVFTDVGMAWEIFSLRFLREVVNDNILPLQAFPNGSPRAPEAGALLIWQ HHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCEEEEEE KGGEFNETGHVAIITQLLDNKIRIAEQNVIHTPLPPGQQWTRELEMVVENGCYTLRDTFD CCCCCCCCCCCEEEEHHHCCCEEEECCCEEECCCCCCHHHHHHHHHHHHCCCEEEECCCC DTTILGWMIQTDDTQYSLSQPDIANQSLAIRGARLPEKGQFDGQWLDERDPLQKAYVQAN CCEEEEEEEECCCCEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHCC GHVINQDPYQYFTITESAEQELIKATNELHLMYLHATDKVLKDDNLLALFDIPKILWPRL CEEECCCCCEEEEECCHHHHHHHHCCCCEEEEEEECCCCEECCCCEEEEECCHHHHHHHH RLSWQRRRHHMITGRMDFCMDERGLKVYEYNADSASCHTEAGLILEKWAEQGYTGKGHNP HHHHHHHHHHEEECCHHHHCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHCCCCCCCCCH AEGLINELAGAWKHSKARPFVHIMQDDDIEEDYHAQFMQQALHQAGFASKILRGLGELRW HHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCC DDAGQLIDGDGRLVNCVWKTWAWETAMEQIREVSETEYAAVPIRTGHPENEVRLIDVLLR CCCCCEECCCCCEEEEEHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCEEEEEEECC PEVLVFEPLWTVIPGNKAILPILWSLFPHHRYLLDTDFTVNDELVQTGYAVKPIAGRCGS CCEEEECCHHEECCCCCCHHHHHHHHCCCCEEEEECCCCCCHHHHHCCCCCCCCHHCCCC NIDLVSHQEELLDKTSGKFATQKNIYQQLWCLPKVAGKYIQVCTFTVGGNYGGTCLRGDD CCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCEEEECCC SLVIKKESDIEPLIVIKA CEEEEECCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7775463; 9278503 [H]