Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
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Accession | NC_004631 |
Length | 4,791,961 |
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The map label for this gene is 29143283
Identifier: 29143283
GI number: 29143283
Start: 3024745
End: 3025227
Strand: Direct
Name: 29143283
Synonym: t2931
Alternate gene names: NA
Gene position: 3024745-3025227 (Clockwise)
Preceding gene: 29143276
Following gene: 29143284
Centisome position: 63.12
GC content: 50.52
Gene sequence:
>483_bases TTGATTAAGAGTAAGGTTTTTTCATTTATGCAACATGACGCCATACAACGTCGCTCGCTGCCGGAGCGTATTTTCCATGC TGTCTGTTTTGAAGGTATTGCGACTGCGATACTGGCGCCAACGACCGCCTGGCTAATGCAGCGCTCGGTGCTGGAGATGG GCGGCCTGACGATATTGCTGGCAACGACGGCCATGATCTGGAATATCATTTATAACGCTCTGTTTGATCGACTGTGGCCT GCGCATCAGGTGAGACGAACCGCCAAAGTGCGCGCACTCCATGCGTTAGGATTTGAAAGTGGGTTTATTGTCATTGGCGT GAGTATTGTCGCCTGGGTACTGAATGTCAGCCTGCTACAAGCATTCACCCTGGAAATTGGTTTCTTCCTGTTCTTTTTGC CGTACACGATGCTGTACAACTGGGCATACGATGTTTTACGCCAACGAATAGTGACCCGCCGCCAACAGCGCGTTAGTGCA TGA
Upstream 100 bases:
>100_bases TAACGCTTCAGGTGAGTAACGCATAACCTATCTACTTTATCGATGGATTTTATCTTTTAGGTATCATATTAAACGATAAA ATAGCGGAAATTTCTTTAAT
Downstream 100 bases:
>100_bases TATTGCTCTTTTTTGCCGGGATCGCAACGCTCCCGGCCCTCCTCCTCCACGACATCCATCTGCTTAAAACGCCCCCAACT GACGCTATTTATGGTAAATT
Product: hypothetical protein
Products: NA
Alternate protein names: Transmembrane Pair Domain Protein; Transmembrane Pair; Transmembrane Pair Permease Of Facilitator Superfamily; Bacterial Transmembrane Pair Family; Outer Membrane Protein; Transmembrane Pair Protein; Transmembrane Protein; Transmembrane Pair Family Protein
Number of amino acids: Translated: 160; Mature: 160
Protein sequence:
>160_residues MIKSKVFSFMQHDAIQRRSLPERIFHAVCFEGIATAILAPTTAWLMQRSVLEMGGLTILLATTAMIWNIIYNALFDRLWP AHQVRRTAKVRALHALGFESGFIVIGVSIVAWVLNVSLLQAFTLEIGFFLFFLPYTMLYNWAYDVLRQRIVTRRQQRVSA
Sequences:
>Translated_160_residues MIKSKVFSFMQHDAIQRRSLPERIFHAVCFEGIATAILAPTTAWLMQRSVLEMGGLTILLATTAMIWNIIYNALFDRLWP AHQVRRTAKVRALHALGFESGFIVIGVSIVAWVLNVSLLQAFTLEIGFFLFFLPYTMLYNWAYDVLRQRIVTRRQQRVSA >Mature_160_residues MIKSKVFSFMQHDAIQRRSLPERIFHAVCFEGIATAILAPTTAWLMQRSVLEMGGLTILLATTAMIWNIIYNALFDRLWP AHQVRRTAKVRALHALGFESGFIVIGVSIVAWVLNVSLLQAFTLEIGFFLFFLPYTMLYNWAYDVLRQRIVTRRQQRVSA
Specific function: Unknown
COG id: COG4125
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18421; Mature: 18421
Theoretical pI: Translated: 11.06; Mature: 11.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKSKVFSFMQHDAIQRRSLPERIFHAVCFEGIATAILAPTTAWLMQRSVLEMGGLTILL CCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH ATTAMIWNIIYNALFDRLWPAHQVRRTAKVRALHALGFESGFIVIGVSIVAWVLNVSLLQ HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH AFTLEIGFFLFFLPYTMLYNWAYDVLRQRIVTRRQQRVSA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MIKSKVFSFMQHDAIQRRSLPERIFHAVCFEGIATAILAPTTAWLMQRSVLEMGGLTILL CCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH ATTAMIWNIIYNALFDRLWPAHQVRRTAKVRALHALGFESGFIVIGVSIVAWVLNVSLLQ HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH AFTLEIGFFLFFLPYTMLYNWAYDVLRQRIVTRRQQRVSA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA