Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
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Accession | NC_004631 |
Length | 4,791,961 |
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The map label for this gene is yqeG [H]
Identifier: 29143284
GI number: 29143284
Start: 3025369
End: 3026598
Strand: Direct
Name: yqeG [H]
Synonym: t2932
Alternate gene names: 29143284
Gene position: 3025369-3026598 (Clockwise)
Preceding gene: 29143283
Following gene: 29143296
Centisome position: 63.13
GC content: 47.07
Gene sequence:
>1230_bases ATGTCTAAAATTTGGTCAAAAGATGAGACTCTCTGGAGTTTTGCATTATACGGAACGGCTGTAGGCGCAGGCACTCTTTT CCTTCCCATCCAGTTGGGATCGGCAGGCGCAATCGTGCTATTTATTACCGCGCTGGTCGCCTGGCCTCTAACATACTGGC CGCATAAGGCGCTGTGTCAGTTTATTCTTTCCTCAAAGACTTCTGCAGGTGAGGGAATTACTGGCGCCGTTACTCATTAT TACGGCAAGAAAATCGGCAGTATTATTACCACGCTTTATTTCATTGCGTTTTTTGTCGTGGTATTAATTTATGCTGTGGC GATTACCAATTCCCTGACAGAGCAATTAGCGAAGCATATTCAGATAGATATTCGCATCCGGATGGCAGTTAGCTTCGGCG TAGTACTTATCCTGAATATGATTTTCTTAATGGGAAGACATGCCACTCTTCGCGTAATGGGCTTTTTAGTCTTTCCACTT ATCGCTTACTTCTTGTTCCTTTCGCTCTACTTAACCGGAAGCTGGCAACCCTCGTTACTGACCGGGCAGATGTCTTTGGA TAGTCACACGTTGCACCAGGTATGGATTTCTATTCCGGTGATGGTTTTTGCTTTTAGCCATACGCCCATTATTTCGACGT TTGCCATCGACAGACGGGAAAATTTTGGCGATCAGGCCATGGATAAATGCAAAAAGATCATGAAGGTCGCCTACCTGATT ATCTGCCTGAGTGTGCTGTTCTTTGTCTTTAGCTGCCTGCTCTCCATTCCGCCGTCATACATTGAAGACGCGCGCAACGA AGGCGTTACCATCCTTTCCGCGCTCTCGATGATGCCCAATGCGCCGGCCTGGCTCTCTATTTCCGGTATTATCGTTGCCG TCGTGGCCATGTCGAAATCTTTCCTCGGCACCTATTTCGGCGTCATCGAGGGCGCAACCGAAATGGTAAGAACCACCCTA CAGCAGGTTGGCGTGAAAAAAAGCCGGGCGTTCAATCGCGCGCTGTCTATCATGCTGGTTTCCGGGATTACGTTTATTAT TTGCTGTATTAACCCGAATGCCATCTCTATGATTTATGCCATTAGCGGCCCGCTCATTGCGATGATTCTGTTTATTATGC CCACGTTGTCAACGTACCTGATACCGGCATTGAAACCCTACCGTTCAATAGGTAATTTCATTACGTTGGTCGTCGGTTTA CTTTGCGTATCGGTGATGTTTTTCGGCTAA
Upstream 100 bases:
>100_bases CTCCTCCACGACATCCATCTGCTTAAAACGCCCCCAACTGACGCTATTTATGGTAAATTGCGCTTCTTTTTGTGTGTTTT ATAGTTGATAAATTCAAATA
Downstream 100 bases:
>100_bases AGTAAAAGATAGCCGGGATATAACTCCCGGCTATTTTATATAAGAATCCAGCACCTTTAATATTACGTCCAGATCTTCTT CACGTCTGGCTTCATCACTC
Product: amino acid ABC transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 409; Mature: 408
Protein sequence:
>409_residues MSKIWSKDETLWSFALYGTAVGAGTLFLPIQLGSAGAIVLFITALVAWPLTYWPHKALCQFILSSKTSAGEGITGAVTHY YGKKIGSIITTLYFIAFFVVVLIYAVAITNSLTEQLAKHIQIDIRIRMAVSFGVVLILNMIFLMGRHATLRVMGFLVFPL IAYFLFLSLYLTGSWQPSLLTGQMSLDSHTLHQVWISIPVMVFAFSHTPIISTFAIDRRENFGDQAMDKCKKIMKVAYLI ICLSVLFFVFSCLLSIPPSYIEDARNEGVTILSALSMMPNAPAWLSISGIIVAVVAMSKSFLGTYFGVIEGATEMVRTTL QQVGVKKSRAFNRALSIMLVSGITFIICCINPNAISMIYAISGPLIAMILFIMPTLSTYLIPALKPYRSIGNFITLVVGL LCVSVMFFG
Sequences:
>Translated_409_residues MSKIWSKDETLWSFALYGTAVGAGTLFLPIQLGSAGAIVLFITALVAWPLTYWPHKALCQFILSSKTSAGEGITGAVTHY YGKKIGSIITTLYFIAFFVVVLIYAVAITNSLTEQLAKHIQIDIRIRMAVSFGVVLILNMIFLMGRHATLRVMGFLVFPL IAYFLFLSLYLTGSWQPSLLTGQMSLDSHTLHQVWISIPVMVFAFSHTPIISTFAIDRRENFGDQAMDKCKKIMKVAYLI ICLSVLFFVFSCLLSIPPSYIEDARNEGVTILSALSMMPNAPAWLSISGIIVAVVAMSKSFLGTYFGVIEGATEMVRTTL QQVGVKKSRAFNRALSIMLVSGITFIICCINPNAISMIYAISGPLIAMILFIMPTLSTYLIPALKPYRSIGNFITLVVGL LCVSVMFFG >Mature_408_residues SKIWSKDETLWSFALYGTAVGAGTLFLPIQLGSAGAIVLFITALVAWPLTYWPHKALCQFILSSKTSAGEGITGAVTHYY GKKIGSIITTLYFIAFFVVVLIYAVAITNSLTEQLAKHIQIDIRIRMAVSFGVVLILNMIFLMGRHATLRVMGFLVFPLI AYFLFLSLYLTGSWQPSLLTGQMSLDSHTLHQVWISIPVMVFAFSHTPIISTFAIDRRENFGDQAMDKCKKIMKVAYLII CLSVLFFVFSCLLSIPPSYIEDARNEGVTILSALSMMPNAPAWLSISGIIVAVVAMSKSFLGTYFGVIEGATEMVRTTLQ QVGVKKSRAFNRALSIMLVSGITFIICCINPNAISMIYAISGPLIAMILFIMPTLSTYLIPALKPYRSIGNFITLVVGLL CVSVMFFG
Specific function: Unknown
COG id: COG0814
COG function: function code E; Amino acid permeases
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the amino acid/polyamine transporter 2 family. SdaC/TdcC subfamily [H]
Homologues:
Organism=Escherichia coli, GI1789211, Length=408, Percent_Identity=90.1960784313726, Blast_Score=753, Evalue=0.0, Organism=Escherichia coli, GI1789160, Length=415, Percent_Identity=39.2771084337349, Blast_Score=284, Evalue=8e-78, Organism=Escherichia coli, GI1789504, Length=420, Percent_Identity=32.3809523809524, Blast_Score=209, Evalue=2e-55, Organism=Escherichia coli, GI145693183, Length=409, Percent_Identity=22.2493887530562, Blast_Score=91, Evalue=2e-19, Organism=Escherichia coli, GI1789961, Length=397, Percent_Identity=21.6624685138539, Blast_Score=73, Evalue=4e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004694 - InterPro: IPR018227 [H]
Pfam domain/function: PF03222 Trp_Tyr_perm [H]
EC number: NA
Molecular weight: Translated: 44970; Mature: 44838
Theoretical pI: Translated: 9.53; Mature: 9.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKIWSKDETLWSFALYGTAVGAGTLFLPIQLGSAGAIVLFITALVAWPLTYWPHKALCQ CCCCCCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHHHHHHHHCCCHHHHHH FILSSKTSAGEGITGAVTHYYGKKIGSIITTLYFIAFFVVVLIYAVAITNSLTEQLAKHI HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC QIDIRIRMAVSFGVVLILNMIFLMGRHATLRVMGFLVFPLIAYFLFLSLYLTGSWQPSLL EEEEEEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCE TGQMSLDSHTLHQVWISIPVMVFAFSHTPIISTFAIDRRENFGDQAMDKCKKIMKVAYLI ECCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH ICLSVLFFVFSCLLSIPPSYIEDARNEGVTILSALSMMPNAPAWLSISGIIVAVVAMSKS HHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHH FLGTYFGVIEGATEMVRTTLQQVGVKKSRAFNRALSIMLVSGITFIICCINPNAISMIYA HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHEEEEEECCCHHHHHHH ISGPLIAMILFIMPTLSTYLIPALKPYRSIGNFITLVVGLLCVSVMFFG HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SKIWSKDETLWSFALYGTAVGAGTLFLPIQLGSAGAIVLFITALVAWPLTYWPHKALCQ CCCCCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHHHHHHHHCCCHHHHHH FILSSKTSAGEGITGAVTHYYGKKIGSIITTLYFIAFFVVVLIYAVAITNSLTEQLAKHI HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC QIDIRIRMAVSFGVVLILNMIFLMGRHATLRVMGFLVFPLIAYFLFLSLYLTGSWQPSLL EEEEEEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCE TGQMSLDSHTLHQVWISIPVMVFAFSHTPIISTFAIDRRENFGDQAMDKCKKIMKVAYLI ECCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH ICLSVLFFVFSCLLSIPPSYIEDARNEGVTILSALSMMPNAPAWLSISGIIVAVVAMSKS HHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHH FLGTYFGVIEGATEMVRTTLQQVGVKKSRAFNRALSIMLVSGITFIICCINPNAISMIYA HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHEEEEEECCCHHHHHHH ISGPLIAMILFIMPTLSTYLIPALKPYRSIGNFITLVVGLLCVSVMFFG HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]