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The map label for this gene is steC [H]

Identifier: 29143212

GI number: 29143212

Start: 2938245

End: 2939018

Strand: Direct

Name: steC [H]

Synonym: t2858

Alternate gene names: 29143212

Gene position: 2938245-2939018 (Clockwise)

Preceding gene: 29143211

Following gene: 29143213

Centisome position: 61.32

GC content: 54.65

Gene sequence:

>774_bases
ATGAACAAGACCAACCATTTTAATCGCCAGGCGCTTATTGCCACGGTATTACTGGCTGCGCCGCTGGTGTCACACAGCGC
GATTGTGCCGGATCGTACCCGCGTTATTTTTAACGGCAATGAAAATTCAATCACCGTCACGCTGAAAAACGGCAACGCCA
CTCTGCCCTATCTCGCTCAGGCGTGGCTGGAAGACGATAAGTTCGCCAAAGATACCCGCTATTTTACCGCCCTGCCGCCG
CTGCAGCGTATTGAGCCAAAATCCGACGGGCAGGTTAAAGTCCAGCCGTTACCAGCCGCGGCTGGCCTACCGCAGGACCG
GGAAAGTCTGTTTTATTTCAACGTGCGAGAAATTCCGCCGAAAAGCGATAAGCCTAATACGCTCCAGCTGGCGCTGCAAA
CGCGTATTAAGTTTTTCTACCGCCCGGTAGCCGTAGCCCGGCAGGTGGATAAGACGCACCCGTGGCAGACGAAGCTCACG
CTGACCTACCAGGGCGATGGTGTGATCTTCGACAACCCCACACCGTTTTACCTCGTCATCAGCAATGCCGGTAGCAAAGA
GAACGAGACCGCCTCCGGCTTTAAAAACCTGCTGATTGCCCCGCGTGAAAAAGTGACCTCTCCCATCAAAGGTGCCTCGC
TCGGCAGCTCACCGGTGGTGGGCTACGTCGATGATTACGGCGGCCATCGCCTGCTGGTTTTTACCTGCTCAGGGAATACC
TGCAAGGTCAATGAGGAAAAAACCCGTGACGCTGAGAAGAAAGCGAATAAGTAA

Upstream 100 bases:

>100_bases
ACCGGCCGCGCCGGTGGCGACAACCACTCAAACCCCGCCCATACCGCTGGCTGACAACCATGCGGTGAATCGCAAGGATA
TGGAATAAAGGGAACCTGTA

Downstream 100 bases:

>100_bases
TCCTGTGCGAAAGAGATCTATGACGATGTTGACTCGCTGGAAAATACTGGTGCTGCTGTGCGGTGGATTCGTTACCGGCA
CCGAGGCTGCCGGCACAAAA

Product: periplasmic fimbrial chaperone

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 257; Mature: 257

Protein sequence:

>257_residues
MNKTNHFNRQALIATVLLAAPLVSHSAIVPDRTRVIFNGNENSITVTLKNGNATLPYLAQAWLEDDKFAKDTRYFTALPP
LQRIEPKSDGQVKVQPLPAAAGLPQDRESLFYFNVREIPPKSDKPNTLQLALQTRIKFFYRPVAVARQVDKTHPWQTKLT
LTYQGDGVIFDNPTPFYLVISNAGSKENETASGFKNLLIAPREKVTSPIKGASLGSSPVVGYVDDYGGHRLLVFTCSGNT
CKVNEEKTRDAEKKANK

Sequences:

>Translated_257_residues
MNKTNHFNRQALIATVLLAAPLVSHSAIVPDRTRVIFNGNENSITVTLKNGNATLPYLAQAWLEDDKFAKDTRYFTALPP
LQRIEPKSDGQVKVQPLPAAAGLPQDRESLFYFNVREIPPKSDKPNTLQLALQTRIKFFYRPVAVARQVDKTHPWQTKLT
LTYQGDGVIFDNPTPFYLVISNAGSKENETASGFKNLLIAPREKVTSPIKGASLGSSPVVGYVDDYGGHRLLVFTCSGNT
CKVNEEKTRDAEKKANK
>Mature_257_residues
MNKTNHFNRQALIATVLLAAPLVSHSAIVPDRTRVIFNGNENSITVTLKNGNATLPYLAQAWLEDDKFAKDTRYFTALPP
LQRIEPKSDGQVKVQPLPAAAGLPQDRESLFYFNVREIPPKSDKPNTLQLALQTRIKFFYRPVAVARQVDKTHPWQTKLT
LTYQGDGVIFDNPTPFYLVISNAGSKENETASGFKNLLIAPREKVTSPIKGASLGSSPVVGYVDDYGGHRLLVFTCSGNT
CKVNEEKTRDAEKKANK

Specific function: Could be required for the biogenesis of a putative fimbria [H]

COG id: COG3121

COG function: function code NU; P pilus assembly protein, chaperone PapD

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Ig-like (immunoglobulin-like) domain [H]

Homologues:

Organism=Escherichia coli, GI1788677, Length=223, Percent_Identity=53.3632286995516, Blast_Score=243, Evalue=7e-66,
Organism=Escherichia coli, GI1786936, Length=231, Percent_Identity=39.8268398268398, Blast_Score=184, Evalue=6e-48,
Organism=Escherichia coli, GI87082203, Length=243, Percent_Identity=33.3333333333333, Blast_Score=153, Evalue=1e-38,
Organism=Escherichia coli, GI1788428, Length=228, Percent_Identity=30.7017543859649, Blast_Score=101, Evalue=5e-23,
Organism=Escherichia coli, GI1786333, Length=237, Percent_Identity=34.5991561181435, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI1789532, Length=206, Percent_Identity=34.4660194174757, Blast_Score=100, Evalue=2e-22,
Organism=Escherichia coli, GI1790771, Length=243, Percent_Identity=32.0987654320988, Blast_Score=97, Evalue=8e-22,
Organism=Escherichia coli, GI1787171, Length=231, Percent_Identity=30.3030303030303, Blast_Score=92, Evalue=4e-20,
Organism=Escherichia coli, GI1786743, Length=222, Percent_Identity=27.9279279279279, Blast_Score=81, Evalue=6e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008962
- InterPro:   IPR001829
- InterPro:   IPR016148
- InterPro:   IPR018046
- InterPro:   IPR016147 [H]

Pfam domain/function: PF02753 Pili_assembly_C; PF00345 Pili_assembly_N [H]

EC number: NA

Molecular weight: Translated: 28501; Mature: 28501

Theoretical pI: Translated: 9.98; Mature: 9.98

Prosite motif: PS00635 PILI_CHAPERONE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKTNHFNRQALIATVLLAAPLVSHSAIVPDRTRVIFNGNENSITVTLKNGNATLPYLAQ
CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEEEEECCCCCCHHHHH
AWLEDDKFAKDTRYFTALPPLQRIEPKSDGQVKVQPLPAAAGLPQDRESLFYFNVREIPP
HHCCCCCCCCCCEEEEECCCHHHCCCCCCCEEEEEECCCCCCCCCCCCEEEEEEEEECCC
KSDKPNTLQLALQTRIKFFYRPVAVARQVDKTHPWQTKLTLTYQGDGVIFDNPTPFYLVI
CCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCEEEECCCCCEEEEE
SNAGSKENETASGFKNLLIAPREKVTSPIKGASLGSSPVVGYVDDYGGHRLLVFTCSGNT
ECCCCCCCCHHHHHHHEEECCHHHHCCCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCE
CKVNEEKTRDAEKKANK
EECCHHHHHHHHHHCCC
>Mature Secondary Structure
MNKTNHFNRQALIATVLLAAPLVSHSAIVPDRTRVIFNGNENSITVTLKNGNATLPYLAQ
CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEEEEECCCCCCHHHHH
AWLEDDKFAKDTRYFTALPPLQRIEPKSDGQVKVQPLPAAAGLPQDRESLFYFNVREIPP
HHCCCCCCCCCCEEEEECCCHHHCCCCCCCEEEEEECCCCCCCCCCCCEEEEEEEEECCC
KSDKPNTLQLALQTRIKFFYRPVAVARQVDKTHPWQTKLTLTYQGDGVIFDNPTPFYLVI
CCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCEEEECCCCCEEEEE
SNAGSKENETASGFKNLLIAPREKVTSPIKGASLGSSPVVGYVDDYGGHRLLVFTCSGNT
ECCCCCCCCHHHHHHHEEECCHHHHCCCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCE
CKVNEEKTRDAEKKANK
EECCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]