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The map label for this gene is steD [H]

Identifier: 29143213

GI number: 29143213

Start: 2939038

End: 2939544

Strand: Direct

Name: steD [H]

Synonym: t2859

Alternate gene names: 29143213

Gene position: 2939038-2939544 (Clockwise)

Preceding gene: 29143212

Following gene: 29143214

Centisome position: 61.33

GC content: 56.41

Gene sequence:

>507_bases
ATGACGATGTTGACTCGCTGGAAAATACTGGTGCTGCTGTGCGGTGGATTCGTTACCGGCACCGAGGCTGCCGGCACAAA
AACCGTGCAACTGGAGCTGCATCTGGTCGTCACTCAACCACCGCCCTGTACGGTAGGCGGCGCTTCCGTAGAGTTTGGCG
ATGTCCTGACCACCAAAGTTGGCGATGTTTCTCAAACGAAACCTGTGGGCTACAGCCTGAACTGCGATGGCAGAGCGAGT
GACTATCTGAAGCTACAAATTCAGGGGACCACCACCACCATCAGCGGGGAGCAGGTTCTGCAAACTTCGGTGCAGGGGTT
AGGCATCCGTATTCAGCAGGCGGGCAATAAGCAACTGGTTCCGGTTGGCATAACGGATTGGCTGAACTTCACCCTGAGCG
GCAGCAATGGGCCGGAGCTGGAAGCCGTACCGGTTAAAGAGCCCACCACGCAGTTAGCGGGTGGCGATTTTAACGCCAGT
GCGACGTTAGTCGTGGATTACCAGTGA

Upstream 100 bases:

>100_bases
CTGGTTTTTACCTGCTCAGGGAATACCTGCAAGGTCAATGAGGAAAAAACCCGTGACGCTGAGAAGAAAGCGAATAAGTA
ATCCTGTGCGAAAGAGATCT

Downstream 100 bases:

>100_bases
TGGAGAGATTCATAGTGAAAAGGGTGCTTATCCTGACGCTTTTAATCACCCGGTTTGCCTGCGCCGACAATTTGACCTTT
CACGGCAAACTGATAAACCC

Product: fimbrial subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 168; Mature: 167

Protein sequence:

>168_residues
MTMLTRWKILVLLCGGFVTGTEAAGTKTVQLELHLVVTQPPPCTVGGASVEFGDVLTTKVGDVSQTKPVGYSLNCDGRAS
DYLKLQIQGTTTTISGEQVLQTSVQGLGIRIQQAGNKQLVPVGITDWLNFTLSGSNGPELEAVPVKEPTTQLAGGDFNAS
ATLVVDYQ

Sequences:

>Translated_168_residues
MTMLTRWKILVLLCGGFVTGTEAAGTKTVQLELHLVVTQPPPCTVGGASVEFGDVLTTKVGDVSQTKPVGYSLNCDGRAS
DYLKLQIQGTTTTISGEQVLQTSVQGLGIRIQQAGNKQLVPVGITDWLNFTLSGSNGPELEAVPVKEPTTQLAGGDFNAS
ATLVVDYQ
>Mature_167_residues
TMLTRWKILVLLCGGFVTGTEAAGTKTVQLELHLVVTQPPPCTVGGASVEFGDVLTTKVGDVSQTKPVGYSLNCDGRASD
YLKLQIQGTTTTISGEQVLQTSVQGLGIRIQQAGNKQLVPVGITDWLNFTLSGSNGPELEAVPVKEPTTQLAGGDFNASA
TLVVDYQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788676, Length=145, Percent_Identity=44.8275862068966, Blast_Score=135, Evalue=9e-34,
Organism=Escherichia coli, GI1788675, Length=171, Percent_Identity=33.3333333333333, Blast_Score=72, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008966
- InterPro:   IPR000259
- InterPro:   IPR014779 [H]

Pfam domain/function: PF00419 Fimbrial [H]

EC number: NA

Molecular weight: Translated: 17666; Mature: 17535

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTMLTRWKILVLLCGGFVTGTEAAGTKTVQLELHLVVTQPPPCTVGGASVEFGDVLTTKV
CCEEHHHEEEEEEECCCEECCCCCCEEEEEEEEEEEEECCCCCCCCCCCEECCCEEEECC
GDVSQTKPVGYSLNCDGRASDYLKLQIQGTTTTISGEQVLQTSVQGLGIRIQQAGNKQLV
CCCCCCCCCCEEECCCCCCCCEEEEEEECCEEEECHHHHHHHHHCCCEEEEEECCCCEEE
PVGITDWLNFTLSGSNGPELEAVPVKEPTTQLAGGDFNASATLVVDYQ
EEEECCEEEEEEECCCCCCEEEEECCCCCCEECCCCCCCEEEEEEEEC
>Mature Secondary Structure 
TMLTRWKILVLLCGGFVTGTEAAGTKTVQLELHLVVTQPPPCTVGGASVEFGDVLTTKV
CEEHHHEEEEEEECCCEECCCCCCEEEEEEEEEEEEECCCCCCCCCCCEECCCEEEECC
GDVSQTKPVGYSLNCDGRASDYLKLQIQGTTTTISGEQVLQTSVQGLGIRIQQAGNKQLV
CCCCCCCCCCEEECCCCCCCCEEEEEEECCEEEECHHHHHHHHHCCCEEEEEECCCCEEE
PVGITDWLNFTLSGSNGPELEAVPVKEPTTQLAGGDFNASATLVVDYQ
EEEECCEEEEEEECCCCCCEEEEECCCCCCEECCCCCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]