Click here to switch to the map view.

The map label for this gene is steB [H]

Identifier: 29143211

GI number: 29143211

Start: 2935533

End: 2938232

Strand: Direct

Name: steB [H]

Synonym: t2857

Alternate gene names: 29143211

Gene position: 2935533-2938232 (Clockwise)

Preceding gene: 29143205

Following gene: 29143212

Centisome position: 61.26

GC content: 55.33

Gene sequence:

>2700_bases
TTGATGAATAACACATGGAAAAGTGTTCTTTGCCCAATAGCGTGTGGAGTGGGAATGCTTCTAAGCGCCTCCCCTTATAG
CGCGTCAGGCAAAGACATCGAATTTAATACCGATTTCCTCGATGTAAAAAATCGCGATAACGTCAACATTGCACAGTTTT
CTCGTAAGGGTTTTATCCTGCCAGGCGTCTACCTTTTACAAATTAAAATTAACGGACAGACTCTGCCGCAGGAATTTCCT
GTTAACTGGGTTATTCCAGAACATGATCCACAAGGAAGTGAGGTTTGCGCAGAACCAGAATTAGTTACGCAATTGGGTAT
AAAGCCGGAACTCGCGGAAAAACTCGTCTGGATAACGCACGGTGAACGACAATGTCTGGCGCCAGATTCACTGAAAGGCA
TGGATTTTCAGGCTGACCTGGGACACTCCACGCTGCTGGTGAATTTACCCCAGGCGTATATGGAATACAGCGATGTCGAC
TGGGACCCACCCGCCCGCTGGGATAATGGTATTCCCGGCATCATTCTGGATTACAACATTAATAATCAGCTCCGCCACGA
TCAAGAAAGCGGCAGCGAAGAGCAAAGCATCAGCGGCAACGGGACGTTAGGCGCGAACCTGGGCGCATGGCGACTACGGG
CCGACTGGCAGGCCAGCTACGACCATCGTGACGATGACGAGAGCACTTCCACCCTCCACGATCAGAGCTGGAGCCGCTAC
TACGCCTATCGCGCACTACCGACGCTCGGGGCCAAACTTACGCTGGGCGAAAGCTATCTCCAGTCCGATGTTTTCGACAG
CTTTAACTATATCGGTGCCAGCGTCGTTTCTGACGATCAGATGCTGCCGCCGAAACTGCGCGGCTATGCGCCGGAGATCG
TGGGCATTGCGCGCTCTAATGCAAAAGTCAAAGTCTCCTGGCAGGGGCGCGTACTGTATGAAACGCAGGTGCCCGCAGGA
CCGTTCCGTATTCAGGATCTCAACCAGTCCGTTTCCGGTACGTTGCACGTCACCGTGGAAGAGCAGAACGGTCAGACCCA
GGAGTTTGACGTTAACACCGCATCGGTTCCCTTCCTGACGCGCCCCGGCATGGTGCGCTACAAGATGGCGCTGGGCCGCC
CGCAGGACTGGGATCATCACCCTATTACCGGCACATTCGCCTCGGCGGAGGCTTCGTGGGGGGTCACCAACGGCTGGTCG
CTCTATGGCGGCGCAATTGGAGAAAGCAACTATCAGGCCGTGGCGCTGGGAAGCGGTAAGGATCTTGGCGTGGTGGGCGC
GGTGGCGGTGGACATTACGCACTCCATCGCCCACATGCCGCAAGACGACGGGTTTGACGGCGAAACGCTGCAGGGTAACT
CATATCGCATCAGCTACTCCCGTGACTTTGATGAAATCGACAGCCGACTAACCTTTGCCGGATACCGCTTCTCAGAAAAG
AACTTTATGAGCATGAGCGACTATCTGGATGCGAAAACCTATCATCATCTCAATGCCGGTCACGAAAAAGAACGCTATAC
GGTCACCTATAACCAGAACTTCCGTGAACAGGGCATGAGCGCCTATTTCAGCTACTCACGCAGTACCTTCTGGGACAGCC
CGGATCAGAGTAACTATAACCTGTCTCTTTCCTGGTACTTCGACTTAGGGTCGATAAAAAATCTCAGTGCGTCGCTGAAC
GGCTATCGCAGCGAATATAACGGTGATAAAGATGATGGCGTCTATATCTCGCTGTCTGTTCCCTGGGGCAATGATTCCAT
CAGCTACAACGGTACGTTTAACGGTAGTCAACACCGTAATCAGCTCGGCTATTCCGGCCACAGCCAGAACGGCGATAACT
GGCAGCTTCACGTCGGGCAGGATGAACAAAGCGCGCAGGCAGACGGTTATTACAGCCATCAGGGCGCGCTGACGGACATC
GATCTGAGCGCGGATTATGAAGAAGGATCGTACCGTTCGCTGAGTATGTCGCTGCGCGGCGGCATGACGCTGACCACCCA
GGGCGGCGCGCTACACCGGGGAAGTTTAGCGGGCAGCACACGTTTGCTGGTTGATACCGACGGCATTGCGGACGTCCCCG
TTAGCGGTAACGGCTCGCCAACCTCAACCAACATTTTCGGCAAGGCCGTGATTGCGGATGTCGGAAGCTATTCGCGCAGC
CTGGCGCGTATCGATCTGAACAAATTGCCGGAGAAGGCGGAAGCTACTAAGTCGGTTGTGCAGATCACGCTCACCGAAGG
CGCCATCGGCTACCGTCACTTTGACGTGGTCAGCGGCGAGAAAATGATGGCGGTTTTCCGGCTAGCAGACGGCGACTTCC
CACCTTTCGGCGCCGAAGTGAAAAACGAGCGCCAGCAGCAGTTGGGCCTGGTGGCCGATGACGGCAACGCCTGGCTGGCG
GGCGTAAAAGCCGGGGAAACATTGAAAGTCTTCTGGGATGGCACGGCGCAGTGTGAAGCATCACTCCCGCCCACGTTTAC
ACCAGAGCTATTGGCCAACGCGCTATTGCTGCCGTGCAAAATGCTGGAAGGTCAGCCCCCCACCGCACCGCAGAAAAGTT
CTCCGCTGCCTGCGCAACCGCTAATCCAGGAACATACGCAAACCGATGGCCAACCGGCCGCGCCGGTGGCGACAACCACT
CAAACCCCGCCCATACCGCTGGCTGACAACCATGCGGTGAATCGCAAGGATATGGAATAA

Upstream 100 bases:

>100_bases
TCACTATCTCTTACCTGTAATTCAGATAACAGAGTCACGACGATAAATACCCTGCCGCTTTAGGTAGGGTATTCCTGTTG
AGTTTTATTGCGGAATATAT

Downstream 100 bases:

>100_bases
AGGGAACCTGTAATGAACAAGACCAACCATTTTAATCGCCAGGCGCTTATTGCCACGGTATTACTGGCTGCGCCGCTGGT
GTCACACAGCGCGATTGTGC

Product: outer membrane usher protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 899; Mature: 899

Protein sequence:

>899_residues
MMNNTWKSVLCPIACGVGMLLSASPYSASGKDIEFNTDFLDVKNRDNVNIAQFSRKGFILPGVYLLQIKINGQTLPQEFP
VNWVIPEHDPQGSEVCAEPELVTQLGIKPELAEKLVWITHGERQCLAPDSLKGMDFQADLGHSTLLVNLPQAYMEYSDVD
WDPPARWDNGIPGIILDYNINNQLRHDQESGSEEQSISGNGTLGANLGAWRLRADWQASYDHRDDDESTSTLHDQSWSRY
YAYRALPTLGAKLTLGESYLQSDVFDSFNYIGASVVSDDQMLPPKLRGYAPEIVGIARSNAKVKVSWQGRVLYETQVPAG
PFRIQDLNQSVSGTLHVTVEEQNGQTQEFDVNTASVPFLTRPGMVRYKMALGRPQDWDHHPITGTFASAEASWGVTNGWS
LYGGAIGESNYQAVALGSGKDLGVVGAVAVDITHSIAHMPQDDGFDGETLQGNSYRISYSRDFDEIDSRLTFAGYRFSEK
NFMSMSDYLDAKTYHHLNAGHEKERYTVTYNQNFREQGMSAYFSYSRSTFWDSPDQSNYNLSLSWYFDLGSIKNLSASLN
GYRSEYNGDKDDGVYISLSVPWGNDSISYNGTFNGSQHRNQLGYSGHSQNGDNWQLHVGQDEQSAQADGYYSHQGALTDI
DLSADYEEGSYRSLSMSLRGGMTLTTQGGALHRGSLAGSTRLLVDTDGIADVPVSGNGSPTSTNIFGKAVIADVGSYSRS
LARIDLNKLPEKAEATKSVVQITLTEGAIGYRHFDVVSGEKMMAVFRLADGDFPPFGAEVKNERQQQLGLVADDGNAWLA
GVKAGETLKVFWDGTAQCEASLPPTFTPELLANALLLPCKMLEGQPPTAPQKSSPLPAQPLIQEHTQTDGQPAAPVATTT
QTPPIPLADNHAVNRKDME

Sequences:

>Translated_899_residues
MMNNTWKSVLCPIACGVGMLLSASPYSASGKDIEFNTDFLDVKNRDNVNIAQFSRKGFILPGVYLLQIKINGQTLPQEFP
VNWVIPEHDPQGSEVCAEPELVTQLGIKPELAEKLVWITHGERQCLAPDSLKGMDFQADLGHSTLLVNLPQAYMEYSDVD
WDPPARWDNGIPGIILDYNINNQLRHDQESGSEEQSISGNGTLGANLGAWRLRADWQASYDHRDDDESTSTLHDQSWSRY
YAYRALPTLGAKLTLGESYLQSDVFDSFNYIGASVVSDDQMLPPKLRGYAPEIVGIARSNAKVKVSWQGRVLYETQVPAG
PFRIQDLNQSVSGTLHVTVEEQNGQTQEFDVNTASVPFLTRPGMVRYKMALGRPQDWDHHPITGTFASAEASWGVTNGWS
LYGGAIGESNYQAVALGSGKDLGVVGAVAVDITHSIAHMPQDDGFDGETLQGNSYRISYSRDFDEIDSRLTFAGYRFSEK
NFMSMSDYLDAKTYHHLNAGHEKERYTVTYNQNFREQGMSAYFSYSRSTFWDSPDQSNYNLSLSWYFDLGSIKNLSASLN
GYRSEYNGDKDDGVYISLSVPWGNDSISYNGTFNGSQHRNQLGYSGHSQNGDNWQLHVGQDEQSAQADGYYSHQGALTDI
DLSADYEEGSYRSLSMSLRGGMTLTTQGGALHRGSLAGSTRLLVDTDGIADVPVSGNGSPTSTNIFGKAVIADVGSYSRS
LARIDLNKLPEKAEATKSVVQITLTEGAIGYRHFDVVSGEKMMAVFRLADGDFPPFGAEVKNERQQQLGLVADDGNAWLA
GVKAGETLKVFWDGTAQCEASLPPTFTPELLANALLLPCKMLEGQPPTAPQKSSPLPAQPLIQEHTQTDGQPAAPVATTT
QTPPIPLADNHAVNRKDME
>Mature_899_residues
MMNNTWKSVLCPIACGVGMLLSASPYSASGKDIEFNTDFLDVKNRDNVNIAQFSRKGFILPGVYLLQIKINGQTLPQEFP
VNWVIPEHDPQGSEVCAEPELVTQLGIKPELAEKLVWITHGERQCLAPDSLKGMDFQADLGHSTLLVNLPQAYMEYSDVD
WDPPARWDNGIPGIILDYNINNQLRHDQESGSEEQSISGNGTLGANLGAWRLRADWQASYDHRDDDESTSTLHDQSWSRY
YAYRALPTLGAKLTLGESYLQSDVFDSFNYIGASVVSDDQMLPPKLRGYAPEIVGIARSNAKVKVSWQGRVLYETQVPAG
PFRIQDLNQSVSGTLHVTVEEQNGQTQEFDVNTASVPFLTRPGMVRYKMALGRPQDWDHHPITGTFASAEASWGVTNGWS
LYGGAIGESNYQAVALGSGKDLGVVGAVAVDITHSIAHMPQDDGFDGETLQGNSYRISYSRDFDEIDSRLTFAGYRFSEK
NFMSMSDYLDAKTYHHLNAGHEKERYTVTYNQNFREQGMSAYFSYSRSTFWDSPDQSNYNLSLSWYFDLGSIKNLSASLN
GYRSEYNGDKDDGVYISLSVPWGNDSISYNGTFNGSQHRNQLGYSGHSQNGDNWQLHVGQDEQSAQADGYYSHQGALTDI
DLSADYEEGSYRSLSMSLRGGMTLTTQGGALHRGSLAGSTRLLVDTDGIADVPVSGNGSPTSTNIFGKAVIADVGSYSRS
LARIDLNKLPEKAEATKSVVQITLTEGAIGYRHFDVVSGEKMMAVFRLADGDFPPFGAEVKNERQQQLGLVADDGNAWLA
GVKAGETLKVFWDGTAQCEASLPPTFTPELLANALLLPCKMLEGQPPTAPQKSSPLPAQPLIQEHTQTDGQPAAPVATTT
QTPPIPLADNHAVNRKDME

Specific function: Involved in the export and assembly of a fimbrial subunit across the outer membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fimbrial export usher family [H]

Homologues:

Organism=Escherichia coli, GI87081778, Length=836, Percent_Identity=35.6459330143541, Blast_Score=495, Evalue=1e-141,
Organism=Escherichia coli, GI1786332, Length=879, Percent_Identity=28.3276450511945, Blast_Score=278, Evalue=1e-75,
Organism=Escherichia coli, GI1790772, Length=893, Percent_Identity=26.8756998880179, Blast_Score=261, Evalue=2e-70,
Organism=Escherichia coli, GI1787172, Length=820, Percent_Identity=26.8292682926829, Blast_Score=240, Evalue=3e-64,
Organism=Escherichia coli, GI1789533, Length=853, Percent_Identity=28.0187573270809, Blast_Score=237, Evalue=2e-63,
Organism=Escherichia coli, GI1788427, Length=826, Percent_Identity=26.7554479418886, Blast_Score=212, Evalue=1e-55,
Organism=Escherichia coli, GI1786744, Length=871, Percent_Identity=25.48794489093, Blast_Score=210, Evalue=3e-55,
Organism=Escherichia coli, GI1789610, Length=787, Percent_Identity=23.7611181702668, Blast_Score=125, Evalue=9e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000015
- InterPro:   IPR018030 [H]

Pfam domain/function: PF00577 Usher [H]

EC number: NA

Molecular weight: Translated: 98674; Mature: 98674

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: PS01151 FIMBRIAL_USHER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMNNTWKSVLCPIACGVGMLLSASPYSASGKDIEFNTDFLDVKNRDNVNIAQFSRKGFIL
CCCCCHHHHHHHHHHCCHHHEECCCCCCCCCEEEECCCEEECCCCCCCCCEEECCCCCCC
PGVYLLQIKINGQTLPQEFPVNWVIPEHDPQGSEVCAEPELVTQLGIKPELAEKLVWITH
CCEEEEEEEECCCCCCHHCCEEEEECCCCCCCCCCCCCCHHHHHCCCCHHHHCEEEEEEC
GERQCLAPDSLKGMDFQADLGHSTLLVNLPQAYMEYSDVDWDPPARWDNGIPGIILDYNI
CCCCCCCCCCCCCCCEEECCCCCEEEEECCHHHHHHCCCCCCCCCCCCCCCCCEEEEECC
NNQLRHDQESGSEEQSISGNGTLGANLGAWRLRADWQASYDHRDDDESTSTLHDQSWSRY
CCCCCCCHHCCCCHHCCCCCCEECCCCCEEEEEECCCCCCCCCCCCCCHHHHCCCCHHHE
YAYRALPTLGAKLTLGESYLQSDVFDSFNYIGASVVSDDQMLPPKLRGYAPEIVGIARSN
EEEEHHHCCCCEEEECHHHHHHHHHHHHHHCCCEEECCCCCCCHHHCCCCCCEEEEECCC
AKVKVSWQGRVLYETQVPAGPFRIQDLNQSVSGTLHVTVEEQNGQTQEFDVNTASVPFLT
CEEEEEECCEEEEEECCCCCCEEEEECCCCCCCEEEEEEECCCCCCEEEECCCCCCCEEE
RPGMVRYKMALGRPQDWDHHPITGTFASAEASWGVTNGWSLYGGAIGESNYQAVALGSGK
CCCCEEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCEEECCCCCCCCCEEEEECCCC
DLGVVGAVAVDITHSIAHMPQDDGFDGETLQGNSYRISYSRDFDEIDSRLTFAGYRFSEK
CCCEEEEEEEHHHHHHHCCCCCCCCCCCEECCCCEEEEECCCHHHHHCEEEEEEEEECCC
NFMSMSDYLDAKTYHHLNAGHEKERYTVTYNQNFREQGMSAYFSYSRSTFWDSPDQSNYN
CCCCHHHHHCCHHEECCCCCCCCCEEEEEECCCHHHHCCHHHHHCCCCCCCCCCCCCCEE
LSLSWYFDLGSIKNLSASLNGYRSEYNGDKDDGVYISLSVPWGNDSISYNGTFNGSQHRN
EEEEEEEECCCCCCHHHHHCCHHHHCCCCCCCCEEEEEEECCCCCCEEECCEECCCHHHH
QLGYSGHSQNGDNWQLHVGQDEQSAQADGYYSHQGALTDIDLSADYEEGSYRSLSMSLRG
HCCCCCCCCCCCCEEEEECCCCCCCCCCCEEECCCCEEEEECCCCCCCCCCEEEEEEECC
GMTLTTQGGALHRGSLAGSTRLLVDTDGIADVPVSGNGSPTSTNIFGKAVIADVGSYSRS
CEEEEECCCCEECCCCCCCEEEEEECCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHH
LARIDLNKLPEKAEATKSVVQITLTEGAIGYRHFDVVSGEKMMAVFRLADGDFPPFGAEV
EEEECHHHCCCHHHHCCEEEEEEEECCCCCEEEEEEECCCCEEEEEEECCCCCCCCCCHH
KNERQQQLGLVADDGNAWLAGVKAGETLKVFWDGTAQCEASLPPTFTPELLANALLLPCK
HHHHHHHCCEEEECCCEEEEEECCCCEEEEEECCCCEEECCCCCCCCHHHHHHHHHHHHH
MLEGQPPTAPQKSSPLPAQPLIQEHTQTDGQPAAPVATTTQTPPIPLADNHAVNRKDME
HHCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MMNNTWKSVLCPIACGVGMLLSASPYSASGKDIEFNTDFLDVKNRDNVNIAQFSRKGFIL
CCCCCHHHHHHHHHHCCHHHEECCCCCCCCCEEEECCCEEECCCCCCCCCEEECCCCCCC
PGVYLLQIKINGQTLPQEFPVNWVIPEHDPQGSEVCAEPELVTQLGIKPELAEKLVWITH
CCEEEEEEEECCCCCCHHCCEEEEECCCCCCCCCCCCCCHHHHHCCCCHHHHCEEEEEEC
GERQCLAPDSLKGMDFQADLGHSTLLVNLPQAYMEYSDVDWDPPARWDNGIPGIILDYNI
CCCCCCCCCCCCCCCEEECCCCCEEEEECCHHHHHHCCCCCCCCCCCCCCCCCEEEEECC
NNQLRHDQESGSEEQSISGNGTLGANLGAWRLRADWQASYDHRDDDESTSTLHDQSWSRY
CCCCCCCHHCCCCHHCCCCCCEECCCCCEEEEEECCCCCCCCCCCCCCHHHHCCCCHHHE
YAYRALPTLGAKLTLGESYLQSDVFDSFNYIGASVVSDDQMLPPKLRGYAPEIVGIARSN
EEEEHHHCCCCEEEECHHHHHHHHHHHHHHCCCEEECCCCCCCHHHCCCCCCEEEEECCC
AKVKVSWQGRVLYETQVPAGPFRIQDLNQSVSGTLHVTVEEQNGQTQEFDVNTASVPFLT
CEEEEEECCEEEEEECCCCCCEEEEECCCCCCCEEEEEEECCCCCCEEEECCCCCCCEEE
RPGMVRYKMALGRPQDWDHHPITGTFASAEASWGVTNGWSLYGGAIGESNYQAVALGSGK
CCCCEEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCEEECCCCCCCCCEEEEECCCC
DLGVVGAVAVDITHSIAHMPQDDGFDGETLQGNSYRISYSRDFDEIDSRLTFAGYRFSEK
CCCEEEEEEEHHHHHHHCCCCCCCCCCCEECCCCEEEEECCCHHHHHCEEEEEEEEECCC
NFMSMSDYLDAKTYHHLNAGHEKERYTVTYNQNFREQGMSAYFSYSRSTFWDSPDQSNYN
CCCCHHHHHCCHHEECCCCCCCCCEEEEEECCCHHHHCCHHHHHCCCCCCCCCCCCCCEE
LSLSWYFDLGSIKNLSASLNGYRSEYNGDKDDGVYISLSVPWGNDSISYNGTFNGSQHRN
EEEEEEEECCCCCCHHHHHCCHHHHCCCCCCCCEEEEEEECCCCCCEEECCEECCCHHHH
QLGYSGHSQNGDNWQLHVGQDEQSAQADGYYSHQGALTDIDLSADYEEGSYRSLSMSLRG
HCCCCCCCCCCCCEEEEECCCCCCCCCCCEEECCCCEEEEECCCCCCCCCCEEEEEEECC
GMTLTTQGGALHRGSLAGSTRLLVDTDGIADVPVSGNGSPTSTNIFGKAVIADVGSYSRS
CEEEEECCCCEECCCCCCCEEEEEECCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHH
LARIDLNKLPEKAEATKSVVQITLTEGAIGYRHFDVVSGEKMMAVFRLADGDFPPFGAEV
EEEECHHHCCCHHHHCCEEEEEEEECCCCCEEEEEEECCCCEEEEEEECCCCCCCCCCHH
KNERQQQLGLVADDGNAWLAGVKAGETLKVFWDGTAQCEASLPPTFTPELLANALLLPCK
HHHHHHHCCEEEECCCEEEEEECCCCEEEEEECCCCEEECCCCCCCCHHHHHHHHHHHHH
MLEGQPPTAPQKSSPLPAQPLIQEHTQTDGQPAAPVATTTQTPPIPLADNHAVNRKDME
HHCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]