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The map label for this gene is ygcH [C]

Identifier: 29143195

GI number: 29143195

Start: 2913759

End: 2914463

Strand: Reverse

Name: ygcH [C]

Synonym: t2840

Alternate gene names: 29143195

Gene position: 2914463-2913759 (Counterclockwise)

Preceding gene: 29143196

Following gene: 29143194

Centisome position: 60.82

GC content: 49.22

Gene sequence:

>705_bases
ATGTATCTTTCTCGTATTCAACTCCGGTTTAATAATTTGCGACCGGAGATGTTGGCAAAGTGGAATTCAGCCAGGCCTTA
TGCCAGCCACCAGTGGTTATGGCAGCTCTTTCCGGAACAGGAATTGCGTCAGTTTCTGTTTCGCGAAGAGGCGCATGGCG
GCTTTTTTATGCTCTCGGCAATACCGCCGTTATTGCAGCACTCCCTGTTTCTTATTGAAACCAAACTATTTAATCCGCAA
CTGACAAATGGTCTTGAGCTTGATTTTCAACTACGAGCTAACCCGGTGATAACCCGTAACGGTAAGCGCAGTGACGTGAT
GATGAACGCGAAACATCAGGCGAAGGCGAATGGTGTGGAGAAAGAACGGTGGTGGGAGCTTCAACAGCAGGCCGCGCAGG
CGTGGCTGGAACAACAAGGGCAGCAGCATGGTTTCCGGTTGATTGCACCGGAACCTGATGATTTCGCTATGTGGGCTGGT
GACGAGTACAGTGAATTGCAGGCGCATTGTGGATGCGTGCAAGCGTATCAGCAACATCGTTTTGTCCGTAAAGACCAGGA
AACCCCAATCACTTTCAGTAGCGTTGATTTTAGCGGTGCGCTCTGTATCACCGATGCAGCACTGTTTAAACAGGCTTTAT
TTTCCGGATTAGGTAAAAGTAAAGCGCTGGGCTGCGGAATGCTGATGGTAAAAAGGAAACGCTGA

Upstream 100 bases:

>100_bases
GGCAACAAAAGCAGCATAGCAATAACCAGCCAGTTAGCCGCCAACGCTGGCAGTTTGGCGGCTACACCCGCTTCAATGGG
CCGTTGCAGGAGAGAACATA

Downstream 100 bases:

>100_bases
TGAGCTGGCTGCCGCTGAATCCCATCCCGTTGAAAGACCGTGTTTCGATGATATTTCTCCAGTACGGACAAATTGATGTG
ATCGACGGTGCGTTTGTGCT

Product: hypothetical protein

Products: NA

Alternate protein names: CRISPR-Associated Cse3 Family Protein; Cse3 Family CRISPR-Associated Protein; Cytoplasmic Protein; CRISPR-Associated Protein; CRISPR-Associated Protein Cse3 Family Protein

Number of amino acids: Translated: 234; Mature: 234

Protein sequence:

>234_residues
MYLSRIQLRFNNLRPEMLAKWNSARPYASHQWLWQLFPEQELRQFLFREEAHGGFFMLSAIPPLLQHSLFLIETKLFNPQ
LTNGLELDFQLRANPVITRNGKRSDVMMNAKHQAKANGVEKERWWELQQQAAQAWLEQQGQQHGFRLIAPEPDDFAMWAG
DEYSELQAHCGCVQAYQQHRFVRKDQETPITFSSVDFSGALCITDAALFKQALFSGLGKSKALGCGMLMVKRKR

Sequences:

>Translated_234_residues
MYLSRIQLRFNNLRPEMLAKWNSARPYASHQWLWQLFPEQELRQFLFREEAHGGFFMLSAIPPLLQHSLFLIETKLFNPQ
LTNGLELDFQLRANPVITRNGKRSDVMMNAKHQAKANGVEKERWWELQQQAAQAWLEQQGQQHGFRLIAPEPDDFAMWAG
DEYSELQAHCGCVQAYQQHRFVRKDQETPITFSSVDFSGALCITDAALFKQALFSGLGKSKALGCGMLMVKRKR
>Mature_234_residues
MYLSRIQLRFNNLRPEMLAKWNSARPYASHQWLWQLFPEQELRQFLFREEAHGGFFMLSAIPPLLQHSLFLIETKLFNPQ
LTNGLELDFQLRANPVITRNGKRSDVMMNAKHQAKANGVEKERWWELQQQAAQAWLEQQGQQHGFRLIAPEPDDFAMWAG
DEYSELQAHCGCVQAYQQHRFVRKDQETPITFSSVDFSGALCITDAALFKQALFSGLGKSKALGCGMLMVKRKR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27103; Mature: 27103

Theoretical pI: Translated: 8.93; Mature: 8.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYLSRIQLRFNNLRPEMLAKWNSARPYASHQWLWQLFPEQELRQFLFREEAHGGFFMLSA
CCCHHEEHHHHCCCHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHCCCCCEEEHHH
IPPLLQHSLFLIETKLFNPQLTNGLELDFQLRANPVITRNGKRSDVMMNAKHQAKANGVE
CCHHHHHHHHEEEHECCCCCCCCCCEEEEEECCCEEEECCCCCCCEEECCCHHHHHCCCC
KERWWELQQQAAQAWLEQQGQQHGFRLIAPEPDDFAMWAGDEYSELQAHCGCVQAYQQHR
HHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCEEECCCCHHHHHHHHHHHHHHHHHH
FVRKDQETPITFSSVDFSGALCITDAALFKQALFSGLGKSKALGCGMLMVKRKR
HHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCC
>Mature Secondary Structure
MYLSRIQLRFNNLRPEMLAKWNSARPYASHQWLWQLFPEQELRQFLFREEAHGGFFMLSA
CCCHHEEHHHHCCCHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHCCCCCEEEHHH
IPPLLQHSLFLIETKLFNPQLTNGLELDFQLRANPVITRNGKRSDVMMNAKHQAKANGVE
CCHHHHHHHHEEEHECCCCCCCCCCEEEEEECCCEEEECCCCCCCEEECCCHHHHHCCCC
KERWWELQQQAAQAWLEQQGQQHGFRLIAPEPDDFAMWAGDEYSELQAHCGCVQAYQQHR
HHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCEEECCCCHHHHHHHHHHHHHHHHHH
FVRKDQETPITFSSVDFSGALCITDAALFKQALFSGLGKSKALGCGMLMVKRKR
HHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA