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The map label for this gene is ygbT [H]

Identifier: 29143194

GI number: 29143194

Start: 2912842

End: 2913759

Strand: Reverse

Name: ygbT [H]

Synonym: t2839

Alternate gene names: 29143194

Gene position: 2913759-2912842 (Counterclockwise)

Preceding gene: 29143195

Following gene: 29143193

Centisome position: 60.81

GC content: 52.94

Gene sequence:

>918_bases
ATGAGCTGGCTGCCGCTGAATCCCATCCCGTTGAAAGACCGTGTTTCGATGATATTTCTCCAGTACGGACAAATTGATGT
GATCGACGGTGCGTTTGTGCTTATCGATAAAACGGGTGTACGTACCCATATTCCTGTTGGATCGGTGGCCTGCATCATGC
TGGAACCGGGGACGCGGGTTTCCCATGCCGCCGTGCGACTTGCGGCAACGGTGGGTACGTTACTGGTGTGGGGGGGGGAA
GCGGGCGTACGCGTTTACGCTTCGGGGCAGCCTGGTGGTGCCCGTTCCGACAAATTGCTTTATCAGGCGAAACTTGCACT
GGATGAAGATTTGCGGCTGAAGGTCGTGCGTAAAATGTTTGAATTACGTTTTGGCGAACCCGCGCCGAGCCGTCGTTCTG
TAGATCAATTGCGTGGTATTGAGGGGAGCCGTGTGCGGGCAACCTATGCACTACTTGCTAAGCAGTATGGCGTGAAATGG
CAGGGACGTCGCTACGATCCGAAAGACTGGGAGAAAGGCGATGTCATTAATCAGTGTATCAGCTCGGCAACCTCCTGCCT
CTATGGCGTAACGGAGGCGGCAATACTGGCTGCCGGATATGCGCCCGCGATTGGATTTGTGCACACCGGCAAGCCGCTTT
CTTTTGTCTATGATATTGCCGATATCATTAAATTTGAGATCGTTGTACCGAAAGCATTTGAAATTGCGCGACGTAATCCT
GCCGAGCCCGATCGTGATGTCCGTATTGCCTGCCGGGATATCTTCCGCAGTGGAAAAACATTGGCGAAATTGATTCCTCT
TATTGAAGATGTTCTCGCGGCAGGGGAAATTCAACCGCCGTTACCTCCTGAAGATTCACACCCCATAGCGATCCCTCTTC
CTGTTGCGTTGGGAGATTCCGGTCATCGGAGTACCTAA

Upstream 100 bases:

>100_bases
GTATCACCGATGCAGCACTGTTTAAACAGGCTTTATTTTCCGGATTAGGTAAAAGTAAAGCGCTGGGCTGCGGAATGCTG
ATGGTAAAAAGGAAACGCTG

Downstream 100 bases:

>100_bases
CGATGAGTATGCTGGTTGTCGTTACCGAAAATGTTCCTCCTCGTCTGCGGGGGAGGCTGGCCGTCTGGTTACTGGAAATT
CGAGCTGGTGTGTATGTTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 305; Mature: 304

Protein sequence:

>305_residues
MSWLPLNPIPLKDRVSMIFLQYGQIDVIDGAFVLIDKTGVRTHIPVGSVACIMLEPGTRVSHAAVRLAATVGTLLVWGGE
AGVRVYASGQPGGARSDKLLYQAKLALDEDLRLKVVRKMFELRFGEPAPSRRSVDQLRGIEGSRVRATYALLAKQYGVKW
QGRRYDPKDWEKGDVINQCISSATSCLYGVTEAAILAAGYAPAIGFVHTGKPLSFVYDIADIIKFEIVVPKAFEIARRNP
AEPDRDVRIACRDIFRSGKTLAKLIPLIEDVLAAGEIQPPLPPEDSHPIAIPLPVALGDSGHRST

Sequences:

>Translated_305_residues
MSWLPLNPIPLKDRVSMIFLQYGQIDVIDGAFVLIDKTGVRTHIPVGSVACIMLEPGTRVSHAAVRLAATVGTLLVWGGE
AGVRVYASGQPGGARSDKLLYQAKLALDEDLRLKVVRKMFELRFGEPAPSRRSVDQLRGIEGSRVRATYALLAKQYGVKW
QGRRYDPKDWEKGDVINQCISSATSCLYGVTEAAILAAGYAPAIGFVHTGKPLSFVYDIADIIKFEIVVPKAFEIARRNP
AEPDRDVRIACRDIFRSGKTLAKLIPLIEDVLAAGEIQPPLPPEDSHPIAIPLPVALGDSGHRST
>Mature_304_residues
SWLPLNPIPLKDRVSMIFLQYGQIDVIDGAFVLIDKTGVRTHIPVGSVACIMLEPGTRVSHAAVRLAATVGTLLVWGGEA
GVRVYASGQPGGARSDKLLYQAKLALDEDLRLKVVRKMFELRFGEPAPSRRSVDQLRGIEGSRVRATYALLAKQYGVKWQ
GRRYDPKDWEKGDVINQCISSATSCLYGVTEAAILAAGYAPAIGFVHTGKPLSFVYDIADIIKFEIVVPKAFEIARRNPA
EPDRDVRIACRDIFRSGKTLAKLIPLIEDVLAAGEIQPPLPPEDSHPIAIPLPVALGDSGHRST

Specific function: Unknown

COG id: COG1518

COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789113, Length=305, Percent_Identity=92.4590163934426, Blast_Score=581, Evalue=1e-167,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002729
- InterPro:   IPR019851 [H]

Pfam domain/function: PF01867 DUF48 [H]

EC number: NA

Molecular weight: Translated: 33246; Mature: 33115

Theoretical pI: Translated: 9.09; Mature: 9.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSWLPLNPIPLKDRVSMIFLQYGQIDVIDGAFVLIDKTGVRTHIPVGSVACIMLEPGTRV
CCCCCCCCCCCHHHHEEEEEECCCEEEECCEEEEEECCCCEEECCCCCEEEEEECCCCCH
SHAAVRLAATVGTLLVWGGEAGVRVYASGQPGGARSDKLLYQAKLALDEDLRLKVVRKMF
HHHHHHHHHHHCEEEEECCCCCEEEEECCCCCCCCCCCEEEEEHHHCCCHHHHHHHHHHH
ELRFGEPAPSRRSVDQLRGIEGSRVRATYALLAKQYGVKWQGRRYDPKDWEKGDVINQCI
HHHCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHH
SSATSCLYGVTEAAILAAGYAPAIGFVHTGKPLSFVYDIADIIKFEIVVPKAFEIARRNP
HHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCHHHHHHHHHHHEEEEECCHHHHHHHCCC
AEPDRDVRIACRDIFRSGKTLAKLIPLIEDVLAAGEIQPPLPPEDSHPIAIPLPVALGDS
CCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEECCC
GHRST
CCCCC
>Mature Secondary Structure 
SWLPLNPIPLKDRVSMIFLQYGQIDVIDGAFVLIDKTGVRTHIPVGSVACIMLEPGTRV
CCCCCCCCCCHHHHEEEEEECCCEEEECCEEEEEECCCCEEECCCCCEEEEEECCCCCH
SHAAVRLAATVGTLLVWGGEAGVRVYASGQPGGARSDKLLYQAKLALDEDLRLKVVRKMF
HHHHHHHHHHHCEEEEECCCCCEEEEECCCCCCCCCCCEEEEEHHHCCCHHHHHHHHHHH
ELRFGEPAPSRRSVDQLRGIEGSRVRATYALLAKQYGVKWQGRRYDPKDWEKGDVINQCI
HHHCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHH
SSATSCLYGVTEAAILAAGYAPAIGFVHTGKPLSFVYDIADIIKFEIVVPKAFEIARRNP
HHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCHHHHHHHHHHHEEEEECCHHHHHHHCCC
AEPDRDVRIACRDIFRSGKTLAKLIPLIEDVLAAGEIQPPLPPEDSHPIAIPLPVALGDS
CCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEECCC
GHRST
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]