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The map label for this gene is ygbF [H]

Identifier: 29143193

GI number: 29143193

Start: 2912546

End: 2912839

Strand: Reverse

Name: ygbF [H]

Synonym: t2838

Alternate gene names: 29143193

Gene position: 2912839-2912546 (Counterclockwise)

Preceding gene: 29143194

Following gene: 29143191

Centisome position: 60.79

GC content: 46.6

Gene sequence:

>294_bases
ATGAGTATGCTGGTTGTCGTTACCGAAAATGTTCCTCCTCGTCTGCGGGGGAGGCTGGCCGTCTGGTTACTGGAAATTCG
AGCTGGTGTGTATGTTGGTGATGTTTCCGCAAAGATCCGCGAGATGATATGGCAACAGGTTTCCGTTCTGGCAGATGAGG
GAAATGTTGTTATGGCGTGGGCGACAAATACAGAATCAGGTTTTGAGTTTCAGACTTTTGGTGTAAATCGACGTATTCCG
GTAGATCTTGATGGACTGCGATTGGTGTCGTTTCTACCTGTTGAAAATCAATAA

Upstream 100 bases:

>100_bases
CAGGGGAAATTCAACCGCCGTTACCTCCTGAAGATTCACACCCCATAGCGATCCCTCTTCCTGTTGCGTTGGGAGATTCC
GGTCATCGGAGTACCTAACG

Downstream 100 bases:

>100_bases
GTTAGAGATCTTTAAAAATTAGGAAAAGTTGGTGGGTTTTTTGTGCGCTAAAAAAGTATTTAAATTCAATTGGGTAGATT
TAGAGTGTTCCCCGCGCCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 97; Mature: 96

Protein sequence:

>97_residues
MSMLVVVTENVPPRLRGRLAVWLLEIRAGVYVGDVSAKIREMIWQQVSVLADEGNVVMAWATNTESGFEFQTFGVNRRIP
VDLDGLRLVSFLPVENQ

Sequences:

>Translated_97_residues
MSMLVVVTENVPPRLRGRLAVWLLEIRAGVYVGDVSAKIREMIWQQVSVLADEGNVVMAWATNTESGFEFQTFGVNRRIP
VDLDGLRLVSFLPVENQ
>Mature_96_residues
SMLVVVTENVPPRLRGRLAVWLLEIRAGVYVGDVSAKIREMIWQQVSVLADEGNVVMAWATNTESGFEFQTFGVNRRIPV
DLDGLRLVSFLPVENQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082153, Length=94, Percent_Identity=89.3617021276596, Blast_Score=176, Evalue=3e-46,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010152 [H]

Pfam domain/function: PF09707 Cas_Cas2CT1978 [H]

EC number: NA

Molecular weight: Translated: 10903; Mature: 10772

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSMLVVVTENVPPRLRGRLAVWLLEIRAGVYVGDVSAKIREMIWQQVSVLADEGNVVMAW
CCEEEEEECCCCHHHHHHEEEEEEEECCCEEEECCHHHHHHHHHHHHHEEECCCCEEEEE
ATNTESGFEFQTFGVNRRIPVDLDGLRLVSFLPVENQ
ECCCCCCCEEEEECCCCCCCCCCCCEEEEEEEECCCC
>Mature Secondary Structure 
SMLVVVTENVPPRLRGRLAVWLLEIRAGVYVGDVSAKIREMIWQQVSVLADEGNVVMAW
CEEEEEECCCCHHHHHHEEEEEEEECCCEEEECCHHHHHHHHHHHHHEEECCCCEEEEE
ATNTESGFEFQTFGVNRRIPVDLDGLRLVSFLPVENQ
ECCCCCCCEEEEECCCCCCCCCCCCEEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2656660; 9278503; 7567469 [H]