Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
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Accession | NC_004631 |
Length | 4,791,961 |
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The map label for this gene is cysD [H]
Identifier: 29143191
GI number: 29143191
Start: 2909821
End: 2910729
Strand: Reverse
Name: cysD [H]
Synonym: t2836
Alternate gene names: 29143191
Gene position: 2910729-2909821 (Counterclockwise)
Preceding gene: 29143193
Following gene: 29143190
Centisome position: 60.74
GC content: 52.59
Gene sequence:
>909_bases ATGGATCAAAAACGACTCACCCACCTGCGGCAACTGGAGGCGGAAAGTATCCACATTATCCGTGAAGTAGCAGCGGAATT CGCTAATCCGGTCATGCTGTACTCCATTGGTAAAGACTCCAGCGTCATGCTGCATCTGGCGCGTAAGGCGTTTTATCCGG GTACGTTACCGTTCCCGCTATTGCACGTTGATACCGGTTGGAAATTCCGTGAGATGTACGCCTTTCGCGATCGTACCGCC AACGCATACGGCTGCGAATTGCTGGTACATAAAAATCCAGAAGGCGTGGCGATGGGCATCAATCCGTTCGTTCACGGTAG CGCTAAACACACTGACATTATGAAAACCGAAGGGTTAAAGCAGGCGCTGAATAAGTACGGTTTTGATGCCGCGTTCGGCG GCGCACGGCGCGATGAGGAAAAATCCCGCGCGAAAGAACGTATTTACTCCTTTCGTGACCGTTTCCATCGCTGGGACCCG AAAAATCAGCGGCCAGAGTTGTGGCGTAACTATAACGGTCAGATTAATAAAGGCGAAAGTATACGCGTCTTCCCGCTCTC CAACTGGACAGAGCAGGATATCTGGCAATACATCTGGCTGGAAAACATCGACATCGTGCCGCTGTATTTGGCTGCTGAAC GCCCGGTTCTGGAACGTGATGGCATGTTGATGATGGTGGATGACGATCGTATCGACCTCCAACCTGGCGAAGTCATCAAA AAAAGGATGGTGCGCTTCCGTACACTTGGCTGTTGGCCGCTCACCGGGGCGGTGGAATCCCACGCGCAAACGCTGCCGGA AATTATCGAAGAGATGCTGGTTTCTACCACCAGCGAGCGCCAGGGGAGGATGATTGACCGCGATCAGGCGGGGTCGATGG AGCTTAAAAAACGTCAGGGGTATTTCTAA
Upstream 100 bases:
>100_bases AACTACTCATTCCAATTCGTCATTTCATTCACTCTCCCGCGCTCCCTATAGTCGTGTAATCGAAATGTTTAGCAAAAAAC GGTATTGCAAAGGAACGGTT
Downstream 100 bases:
>100_bases GGAGCCGCCATGAACACCATACTTGCACAACAAATCGCCAGTGAAGGCGGCGTCGAAGCCTGGATGATTGCCCAACAACA CAAAAGCCTGCTGCGTTTTT
Product: sulfate adenylyltransferase subunit 2
Products: NA
Alternate protein names: ATP-sulfurylase small subunit; Sulfate adenylate transferase; SAT [H]
Number of amino acids: Translated: 302; Mature: 302
Protein sequence:
>302_residues MDQKRLTHLRQLEAESIHIIREVAAEFANPVMLYSIGKDSSVMLHLARKAFYPGTLPFPLLHVDTGWKFREMYAFRDRTA NAYGCELLVHKNPEGVAMGINPFVHGSAKHTDIMKTEGLKQALNKYGFDAAFGGARRDEEKSRAKERIYSFRDRFHRWDP KNQRPELWRNYNGQINKGESIRVFPLSNWTEQDIWQYIWLENIDIVPLYLAAERPVLERDGMLMMVDDDRIDLQPGEVIK KRMVRFRTLGCWPLTGAVESHAQTLPEIIEEMLVSTTSERQGRMIDRDQAGSMELKKRQGYF
Sequences:
>Translated_302_residues MDQKRLTHLRQLEAESIHIIREVAAEFANPVMLYSIGKDSSVMLHLARKAFYPGTLPFPLLHVDTGWKFREMYAFRDRTA NAYGCELLVHKNPEGVAMGINPFVHGSAKHTDIMKTEGLKQALNKYGFDAAFGGARRDEEKSRAKERIYSFRDRFHRWDP KNQRPELWRNYNGQINKGESIRVFPLSNWTEQDIWQYIWLENIDIVPLYLAAERPVLERDGMLMMVDDDRIDLQPGEVIK KRMVRFRTLGCWPLTGAVESHAQTLPEIIEEMLVSTTSERQGRMIDRDQAGSMELKKRQGYF >Mature_302_residues MDQKRLTHLRQLEAESIHIIREVAAEFANPVMLYSIGKDSSVMLHLARKAFYPGTLPFPLLHVDTGWKFREMYAFRDRTA NAYGCELLVHKNPEGVAMGINPFVHGSAKHTDIMKTEGLKQALNKYGFDAAFGGARRDEEKSRAKERIYSFRDRFHRWDP KNQRPELWRNYNGQINKGESIRVFPLSNWTEQDIWQYIWLENIDIVPLYLAAERPVLERDGMLMMVDDDRIDLQPGEVIK KRMVRFRTLGCWPLTGAVESHAQTLPEIIEEMLVSTTSERQGRMIDRDQAGSMELKKRQGYF
Specific function: First step in the sulfate activation pathway. This reaction occurs early in the reductive branch of the cysteine biosynthetic pathway. [C]
COG id: COG0175
COG function: function code EH; 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PAPS reductase family. CysD subfamily [H]
Homologues:
Organism=Escherichia coli, GI1789109, Length=302, Percent_Identity=97.0198675496689, Blast_Score=615, Evalue=1e-177,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002500 - InterPro: IPR014729 - InterPro: IPR011784 [H]
Pfam domain/function: PF01507 PAPS_reduct [H]
EC number: =2.7.7.4 [H]
Molecular weight: Translated: 35177; Mature: 35177
Theoretical pI: Translated: 8.61; Mature: 8.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDQKRLTHLRQLEAESIHIIREVAAEFANPVMLYSIGKDSSVMLHLARKAFYPGTLPFPL CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCE LHVDTGWKFREMYAFRDRTANAYGCELLVHKNPEGVAMGINPFVHGSAKHTDIMKTEGLK EEECCCCCHHHHHHHHHCCCCCCCEEEEEEECCCCEEECCCCCCCCCCCCCHHHHHHHHH QALNKYGFDAAFGGARRDEEKSRAKERIYSFRDRFHRWDPKNQRPELWRNYNGQINKGES HHHHHCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCE IRVFPLSNWTEQDIWQYIWLENIDIVPLYLAAERPVLERDGMLMMVDDDRIDLQPGEVIK EEEEECCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCEEEEEECCCCCCCCHHHHH KRMVRFRTLGCWPLTGAVESHAQTLPEIIEEMLVSTTSERQGRMIDRDQAGSMELKKRQG HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCHHHHHCC YF CC >Mature Secondary Structure MDQKRLTHLRQLEAESIHIIREVAAEFANPVMLYSIGKDSSVMLHLARKAFYPGTLPFPL CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCE LHVDTGWKFREMYAFRDRTANAYGCELLVHKNPEGVAMGINPFVHGSAKHTDIMKTEGLK EEECCCCCHHHHHHHHHCCCCCCCEEEEEEECCCCEEECCCCCCCCCCCCCHHHHHHHHH QALNKYGFDAAFGGARRDEEKSRAKERIYSFRDRFHRWDPKNQRPELWRNYNGQINKGES HHHHHCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCE IRVFPLSNWTEQDIWQYIWLENIDIVPLYLAAERPVLERDGMLMMVDDDRIDLQPGEVIK EEEEECCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCEEEEEECCCCCCCCHHHHH KRMVRFRTLGCWPLTGAVESHAQTLPEIIEEMLVSTTSERQGRMIDRDQAGSMELKKRQG HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCHHHHHCC YF CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA