Click here to switch to the map view.

The map label for this gene is ytxE [H]

Identifier: 29142957

GI number: 29142957

Start: 2661067

End: 2662368

Strand: Reverse

Name: ytxE [H]

Synonym: t2581

Alternate gene names: 29142957

Gene position: 2662368-2661067 (Counterclockwise)

Preceding gene: 29142958

Following gene: 29142956

Centisome position: 55.56

GC content: 59.37

Gene sequence:

>1302_bases
ATGACAGACAGTACCCTGACGCCGCCAGCGGCGGACATGATGTCCTTTTTGTCCACCACGCCGGAACATAAGGACAGTGA
ATATGAAACGCCGGTACACACCAGCCAGCGCACGGAACTCAATGTCATCGTTGAAGACGGTCCGGACAGCAAACTCCGGC
TGGCTGAAATCAGCGCGGCGGCTAACCCGTTGCTCGCCGCTGCCCGGCCTTTATTGTGCGCTCTCGCAGCCATGCCCGCT
AAACTGGATGCGGCCCTGGTAGAGCCTTACCGTAATCTGCTGGTACGCGAGATGCATCTGTACCAGACATTATGCGATCA
GGCGAACCTGCGGCGCGAGCACGTACTGGCGGTACGTTACTGCCTGTGTACGGCGCTTGATGAAGCCGCCAATAACACAA
CCTGGGGGCGGCGCGGCGTCTGGGCCGGAAAAAGCCTGCTGGTAACATTTCATGGTGAAAGCGAAGGCGGGATAAAACTT
TTCCAGATCATCGGGCGTCTGGCGGCCAGCTTCCAGGAACATGGCAACGTACTGGAGGTTATCTACCACCTGCTGGGGCT
GGGATTTGAAGGCCGCTACAGCGTGCAGCCAGACGGGCGTAAGCAACTGGACAATATTCGTCAGCAACTGCTGACACAGC
TTTCACAGCGTCGCGATCCGGTCATGCCCGCGCTCTCGCCTGACTTTCAGGGGGCGATAAGCGGACGACTGCGGCGGATG
CGCCGGGTGCCGGTCTGGCTGAGCGCCGGGATAGCCCTGTTGGCGATGCTGACGCTGTTTGGCCTTTACAGCCACCGGAT
GGATGTGCAGACCGTCACCGTACAACAGCATATTGATGCGATTGGTATAAAACTGCCGCCGCCCGTGCCGGTTCATAAGC
TGCGGCTGAAAATCCTGCTGGCAAACGAAATCGCCCGTGGCCTGCTGACCGTGGACGAAGATGACCAGCACAGTAGGGTG
GTCTTCCGTGGCGACGCCATGTTTGTACCGGGACAAAAAACGGTGAGTGACGCAATCCGGCCAGTGATTAACAAAGCGGC
GCGGGAAATCGCCCGCGTGGGCGGCGCAGTCACTGTAACGGGTCACACTGACAGCCAGCCCATTCATTCGGCTGAATTCC
CATCCAACCTGGTGCTATCGGAAAAACGGGCGGCGGAAGTTGCGGCGTTGCTGACCTCCGGCGGCGTACCTGCCGGACGG
GTACATATCGTCGGCAAGGGCGATACGGTGCCGGTGGCGGATAACGGCAGTAAAGCCGGGCGGGCGAAAAACCGTCGGGT
GGAAATTCTGGTAGTGGAGTGA

Upstream 100 bases:

>100_bases
GAGCATTGTGGGAACACATTGCCCGTTACGGCGGGATGGCCATGCATACCGCCGGGGAATTTCCGGGGCTGGAGACAGAA
CTGTGGGGAGTGCGCGATAA

Downstream 100 bases:

>100_bases
ATGAATGATAAAAAAATCGACCTATGATGTGTCTCATCATTCGGCAATATGTGGCGTGACGGGGGATTATTATCGGATCT
CAGCGACATATCACATAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: ORF2 [H]

Number of amino acids: Translated: 433; Mature: 432

Protein sequence:

>433_residues
MTDSTLTPPAADMMSFLSTTPEHKDSEYETPVHTSQRTELNVIVEDGPDSKLRLAEISAAANPLLAAARPLLCALAAMPA
KLDAALVEPYRNLLVREMHLYQTLCDQANLRREHVLAVRYCLCTALDEAANNTTWGRRGVWAGKSLLVTFHGESEGGIKL
FQIIGRLAASFQEHGNVLEVIYHLLGLGFEGRYSVQPDGRKQLDNIRQQLLTQLSQRRDPVMPALSPDFQGAISGRLRRM
RRVPVWLSAGIALLAMLTLFGLYSHRMDVQTVTVQQHIDAIGIKLPPPVPVHKLRLKILLANEIARGLLTVDEDDQHSRV
VFRGDAMFVPGQKTVSDAIRPVINKAAREIARVGGAVTVTGHTDSQPIHSAEFPSNLVLSEKRAAEVAALLTSGGVPAGR
VHIVGKGDTVPVADNGSKAGRAKNRRVEILVVE

Sequences:

>Translated_433_residues
MTDSTLTPPAADMMSFLSTTPEHKDSEYETPVHTSQRTELNVIVEDGPDSKLRLAEISAAANPLLAAARPLLCALAAMPA
KLDAALVEPYRNLLVREMHLYQTLCDQANLRREHVLAVRYCLCTALDEAANNTTWGRRGVWAGKSLLVTFHGESEGGIKL
FQIIGRLAASFQEHGNVLEVIYHLLGLGFEGRYSVQPDGRKQLDNIRQQLLTQLSQRRDPVMPALSPDFQGAISGRLRRM
RRVPVWLSAGIALLAMLTLFGLYSHRMDVQTVTVQQHIDAIGIKLPPPVPVHKLRLKILLANEIARGLLTVDEDDQHSRV
VFRGDAMFVPGQKTVSDAIRPVINKAAREIARVGGAVTVTGHTDSQPIHSAEFPSNLVLSEKRAAEVAALLTSGGVPAGR
VHIVGKGDTVPVADNGSKAGRAKNRRVEILVVE
>Mature_432_residues
TDSTLTPPAADMMSFLSTTPEHKDSEYETPVHTSQRTELNVIVEDGPDSKLRLAEISAAANPLLAAARPLLCALAAMPAK
LDAALVEPYRNLLVREMHLYQTLCDQANLRREHVLAVRYCLCTALDEAANNTTWGRRGVWAGKSLLVTFHGESEGGIKLF
QIIGRLAASFQEHGNVLEVIYHLLGLGFEGRYSVQPDGRKQLDNIRQQLLTQLSQRRDPVMPALSPDFQGAISGRLRRMR
RVPVWLSAGIALLAMLTLFGLYSHRMDVQTVTVQQHIDAIGIKLPPPVPVHKLRLKILLANEIARGLLTVDEDDQHSRVV
FRGDAMFVPGQKTVSDAIRPVINKAAREIARVGGAVTVTGHTDSQPIHSAEFPSNLVLSEKRAAEVAALLTSGGVPAGRV
HIVGKGDTVPVADNGSKAGRAKNRRVEILVVE

Specific function: May be involved in some transport function [H]

COG id: COG3455

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell membrane; Single-pass type II membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006665 [H]

Pfam domain/function: PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 47259; Mature: 47128

Theoretical pI: Translated: 8.88; Mature: 8.88

Prosite motif: PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDSTLTPPAADMMSFLSTTPEHKDSEYETPVHTSQRTELNVIVEDGPDSKLRLAEISAA
CCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEEHHHHH
ANPLLAAARPLLCALAAMPAKLDAALVEPYRNLLVREMHLYQTLCDQANLRREHVLAVRY
CCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
CLCTALDEAANNTTWGRRGVWAGKSLLVTFHGESEGGIKLFQIIGRLAASFQEHGNVLEV
HHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCHHHH
IYHLLGLGFEGRYSVQPDGRKQLDNIRQQLLTQLSQRRDPVMPALSPDFQGAISGRLRRM
HHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH
RRVPVWLSAGIALLAMLTLFGLYSHRMDVQTVTVQQHIDAIGIKLPPPVPVHKLRLKILL
HCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHCCCCCCCCCCHHHHHHHHHH
ANEIARGLLTVDEDDQHSRVVFRGDAMFVPGQKTVSDAIRPVINKAAREIARVGGAVTVT
HHHHHHCCEECCCCCCCCEEEEECCEEEECCCHHHHHHHHHHHHHHHHHHHHCCCEEEEE
GHTDSQPIHSAEFPSNLVLSEKRAAEVAALLTSGGVPAGRVHIVGKGDTVPVADNGSKAG
CCCCCCCCCCCCCCCCCEECHHHHHHHHHHHHCCCCCCCEEEEEECCCEEECCCCCCCCC
RAKNRRVEILVVE
CCCCCEEEEEEEC
>Mature Secondary Structure 
TDSTLTPPAADMMSFLSTTPEHKDSEYETPVHTSQRTELNVIVEDGPDSKLRLAEISAA
CCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEEHHHHH
ANPLLAAARPLLCALAAMPAKLDAALVEPYRNLLVREMHLYQTLCDQANLRREHVLAVRY
CCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
CLCTALDEAANNTTWGRRGVWAGKSLLVTFHGESEGGIKLFQIIGRLAASFQEHGNVLEV
HHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCHHHH
IYHLLGLGFEGRYSVQPDGRKQLDNIRQQLLTQLSQRRDPVMPALSPDFQGAISGRLRRM
HHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH
RRVPVWLSAGIALLAMLTLFGLYSHRMDVQTVTVQQHIDAIGIKLPPPVPVHKLRLKILL
HCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHCCCCCCCCCCHHHHHHHHHH
ANEIARGLLTVDEDDQHSRVVFRGDAMFVPGQKTVSDAIRPVINKAAREIARVGGAVTVT
HHHHHHCCEECCCCCCCCEEEEECCEEEECCCHHHHHHHHHHHHHHHHHHHHCCCEEEEE
GHTDSQPIHSAEFPSNLVLSEKRAAEVAALLTSGGVPAGRVHIVGKGDTVPVADNGSKAG
CCCCCCCCCCCCCCCCCEECHHHHHHHHHHHHCCCCCCCEEEEEECCCEEECCCCCCCCC
RAKNRRVEILVVE
CCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8200532 [H]