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The map label for this gene is 29142958

Identifier: 29142958

GI number: 29142958

Start: 2662365

End: 2663708

Strand: Reverse

Name: 29142958

Synonym: t2582

Alternate gene names: NA

Gene position: 2663708-2662365 (Counterclockwise)

Preceding gene: 29142959

Following gene: 29142957

Centisome position: 55.59

GC content: 58.11

Gene sequence:

>1344_bases
ATGAGCTGGAATGACCGCGTAGTCTGGAGTGAAGGACAATTTTTACTGCCGCAGATGTTTCAGCAGCAAGAGCGTTATCT
GGAACACGTCATGCATTACCGCAGCCTGCCGCTGACTCCCTTTTTCTGGGGATTCAGCCACTACAATATTGATGGCGAAG
CGCTGAACATCGGTAAACTGATACTGAAAGAGGCATCAGGGATTTTTCCTGACGGCACGCCGTTTAACGCACCGGACCAC
ACCCCGCTGCCGCCGCCGCTGACCATCCTGCCGGAGCACCTGAACCAGCAGATTTGTCTGGCGGTACCGGTACGCGCGCC
GAACAGCGAAGAAACCACGTTTGACAATAACCCGGAATCACTGGCGCGTTTCTCGGTACATGAACACGACATCCGCGACG
CCAACTCGCTGGGACGTGGCGCGCAGTTATTACAGCTCAGTCATCTGCGCCTGCGGCTGCTGCCGGAAAAGGCGGTGACG
GGCGCCTGGATTGGCCTGCCGTTGACCCGCATCACCGGGTTGAACCCTGACGGGCGGATAGATATCGACCACGACCTGAT
CCCGCCCATCATTAATTATCAGGCCAGTTCACTGATGTGTACCTGGCTGTCGTGGATCAACGATCTCATCCGGATGCGGG
CCGATTCGCTGGCGGAACGGCTGACCGGCAGCGACAACCACGGCCATGAAGCAGCGGAGGTCTCCGATTACCTGCTGCTG
CAAATTCTCAATCGCTTTGAGCCGCTGCTGACTCACCTGGCGAAAACCCCGCTGGCCCCGGAAGTGTTGTATCGCTACCT
GTCCGAACTGGCCGGGGAACTCTCCACCTATGTGCGTCCACAAACGCGACGGCCCGCTGAATACAAAGAGTACAAACACC
TGACGCCCTATGCCGGGTTGAAATCGCTGGTTGATGAGGTGCAGTTCCTGCTGAACGCGGTACTGATCCGGGGCGCGCAG
CGCATCGAGCTGAAAGAGGGGACTTACGGTATCCTGAATGCGGTGGTGGCCCCTTCCGATCTTGCCGATTTCAGCACGCT
GGTACTGGCGATAAAGGCTTCAATGCCGACCGATGTGCTACTGCAACATTTTGCCGCCCAGACCAAAATCGGGCCATCCG
ATCGCCTGCCGGAACTGATCCGCTCGCATCTGCCGGGGCTGGCTTTGCAGGTTCTGCCTGTACCACCGCGCCAAATCCCG
TTTCAGGCCGGATACATCTATTACGACATCCGCCGCGAGGGAGCATTGTGGGAACACATTGCCCGTTACGGCGGGATGGC
CATGCATACCGCCGGGGAATTTCCGGGGCTGGAGACAGAACTGTGGGGAGTGCGCGATAAATGA

Upstream 100 bases:

>100_bases
AGCCTGGTACAGCAGCTTCATACCGGGGAAAGGAAAAGTGCAGTTGGAGGCGGAACTGGAACAAAGCGCCATTGTAATTA
CGGAACGGGATAAATGAATT

Downstream 100 bases:

>100_bases
CAGACAGTACCCTGACGCCGCCAGCGGCGGACATGATGTCCTTTTTGTCCACCACGCCGGAACATAAGGACAGTGAATAT
GAAACGCCGGTACACACCAG

Product: hypothetical protein

Products: NA

Alternate protein names: Type VI Secretion Protein Family; Protein ImpJ/VasE; Type VI Secretion System Core Protein; Replication/Virulence Associated Protein; T6ss M; Protein ImpJ; Conserved Protein; Type VI Secretion Protein VasE; Type VI Secretion System Protein ImpJ; Temperature-Dependent Protein Secretion ImpJ; Type VI Secretion

Number of amino acids: Translated: 447; Mature: 446

Protein sequence:

>447_residues
MSWNDRVVWSEGQFLLPQMFQQQERYLEHVMHYRSLPLTPFFWGFSHYNIDGEALNIGKLILKEASGIFPDGTPFNAPDH
TPLPPPLTILPEHLNQQICLAVPVRAPNSEETTFDNNPESLARFSVHEHDIRDANSLGRGAQLLQLSHLRLRLLPEKAVT
GAWIGLPLTRITGLNPDGRIDIDHDLIPPIINYQASSLMCTWLSWINDLIRMRADSLAERLTGSDNHGHEAAEVSDYLLL
QILNRFEPLLTHLAKTPLAPEVLYRYLSELAGELSTYVRPQTRRPAEYKEYKHLTPYAGLKSLVDEVQFLLNAVLIRGAQ
RIELKEGTYGILNAVVAPSDLADFSTLVLAIKASMPTDVLLQHFAAQTKIGPSDRLPELIRSHLPGLALQVLPVPPRQIP
FQAGYIYYDIRREGALWEHIARYGGMAMHTAGEFPGLETELWGVRDK

Sequences:

>Translated_447_residues
MSWNDRVVWSEGQFLLPQMFQQQERYLEHVMHYRSLPLTPFFWGFSHYNIDGEALNIGKLILKEASGIFPDGTPFNAPDH
TPLPPPLTILPEHLNQQICLAVPVRAPNSEETTFDNNPESLARFSVHEHDIRDANSLGRGAQLLQLSHLRLRLLPEKAVT
GAWIGLPLTRITGLNPDGRIDIDHDLIPPIINYQASSLMCTWLSWINDLIRMRADSLAERLTGSDNHGHEAAEVSDYLLL
QILNRFEPLLTHLAKTPLAPEVLYRYLSELAGELSTYVRPQTRRPAEYKEYKHLTPYAGLKSLVDEVQFLLNAVLIRGAQ
RIELKEGTYGILNAVVAPSDLADFSTLVLAIKASMPTDVLLQHFAAQTKIGPSDRLPELIRSHLPGLALQVLPVPPRQIP
FQAGYIYYDIRREGALWEHIARYGGMAMHTAGEFPGLETELWGVRDK
>Mature_446_residues
SWNDRVVWSEGQFLLPQMFQQQERYLEHVMHYRSLPLTPFFWGFSHYNIDGEALNIGKLILKEASGIFPDGTPFNAPDHT
PLPPPLTILPEHLNQQICLAVPVRAPNSEETTFDNNPESLARFSVHEHDIRDANSLGRGAQLLQLSHLRLRLLPEKAVTG
AWIGLPLTRITGLNPDGRIDIDHDLIPPIINYQASSLMCTWLSWINDLIRMRADSLAERLTGSDNHGHEAAEVSDYLLLQ
ILNRFEPLLTHLAKTPLAPEVLYRYLSELAGELSTYVRPQTRRPAEYKEYKHLTPYAGLKSLVDEVQFLLNAVLIRGAQR
IELKEGTYGILNAVVAPSDLADFSTLVLAIKASMPTDVLLQHFAAQTKIGPSDRLPELIRSHLPGLALQVLPVPPRQIPF
QAGYIYYDIRREGALWEHIARYGGMAMHTAGEFPGLETELWGVRDK

Specific function: Unknown

COG id: COG3522

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50425; Mature: 50294

Theoretical pI: Translated: 6.16; Mature: 6.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSWNDRVVWSEGQFLLPQMFQQQERYLEHVMHYRSLPLTPFFWGFSHYNIDGEALNIGKL
CCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHECCCEEECCCCCHHHHHHH
ILKEASGIFPDGTPFNAPDHTPLPPPLTILPEHLNQQICLAVPVRAPNSEETTFDNNPES
HHHHHCCCCCCCCCCCCCCCCCCCCCHHHCHHHCCCCEEEEEECCCCCCCCCCCCCCHHH
LARFSVHEHDIRDANSLGRGAQLLQLSHLRLRLLPEKAVTGAWIGLPLTRITGLNPDGRI
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHCCHHHCCCHHHHCCCCCCCCE
DIDHDLIPPIINYQASSLMCTWLSWINDLIRMRADSLAERLTGSDNHGHEAAEVSDYLLL
ECCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
QILNRFEPLLTHLAKTPLAPEVLYRYLSELAGELSTYVRPQTRRPAEYKEYKHLTPYAGL
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCHHHH
KSLVDEVQFLLNAVLIRGAQRIELKEGTYGILNAVVAPSDLADFSTLVLAIKASMPTDVL
HHHHHHHHHHHHHHHHCCCHHEEECCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHH
LQHFAAQTKIGPSDRLPELIRSHLPGLALQVLPVPPRQIPFQAGYIYYDIRREGALWEHI
HHHHHHHCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCEEEEEEECCCHHHHHH
ARYGGMAMHTAGEFPGLETELWGVRDK
HHHCCEEEECCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SWNDRVVWSEGQFLLPQMFQQQERYLEHVMHYRSLPLTPFFWGFSHYNIDGEALNIGKL
CCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHECCCEEECCCCCHHHHHHH
ILKEASGIFPDGTPFNAPDHTPLPPPLTILPEHLNQQICLAVPVRAPNSEETTFDNNPES
HHHHHCCCCCCCCCCCCCCCCCCCCCHHHCHHHCCCCEEEEEECCCCCCCCCCCCCCHHH
LARFSVHEHDIRDANSLGRGAQLLQLSHLRLRLLPEKAVTGAWIGLPLTRITGLNPDGRI
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHCCHHHCCCHHHHCCCCCCCCE
DIDHDLIPPIINYQASSLMCTWLSWINDLIRMRADSLAERLTGSDNHGHEAAEVSDYLLL
ECCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
QILNRFEPLLTHLAKTPLAPEVLYRYLSELAGELSTYVRPQTRRPAEYKEYKHLTPYAGL
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCHHHH
KSLVDEVQFLLNAVLIRGAQRIELKEGTYGILNAVVAPSDLADFSTLVLAIKASMPTDVL
HHHHHHHHHHHHHHHHCCCHHEEECCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHH
LQHFAAQTKIGPSDRLPELIRSHLPGLALQVLPVPPRQIPFQAGYIYYDIRREGALWEHI
HHHHHHHCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCEEEEEEECCCHHHHHH
ARYGGMAMHTAGEFPGLETELWGVRDK
HHHCCEEEECCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA