| Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
|---|---|
| Accession | NC_004631 |
| Length | 4,791,961 |
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The map label for this gene is 29142956
Identifier: 29142956
GI number: 29142956
Start: 2660313
End: 2661062
Strand: Reverse
Name: 29142956
Synonym: t2580
Alternate gene names: NA
Gene position: 2661062-2660313 (Counterclockwise)
Preceding gene: 29142957
Following gene: 29142955
Centisome position: 55.53
GC content: 41.73
Gene sequence:
>750_bases ATGATAAAAAAATCGACCTATGATGTGTCTCATCATTCGGCAATATGTGGCGTGACGGGGGATTATTATCGGATCTCAGC GACATATCACATAAAACGATCTATCCGTGTTTTTTTGATCATCTTATGTTGCCTGTTACCCGGTGGCGTTTTTGCCGGGT CCCTGATTAACGCAGGATTAATTTCCCCCGATAATGTCAACCTCAGTATACGGGATTTTCTGGGGTTTTATGCCAGTGAT AACTTACAGGAAAAAGATAATACACTGATGTATGTGTTGGGGGTAGCGGATGCCACAGAAGGTAAGACGTGGTGTGGATA TGGTCAGGTTGACAGTATAACAATAAACCATACTGTGCTGGCCTGGCTTGATCGGTACTCTGTGAAAAAGCCTGATGCAA GAGCTTCGGTGCTGATAGAGGAAGCATTAGTTAAAAATTTCCCCTGTCAGGGGACTGAACCCTCCGTAAAAATTGCTTCC CGGTCATCTCCTGTGTTATCCCTGACGCCGGATGCGCTTAATCTTTCAGGTAATGACTTTTTTAAATTTTGGGTATCTGG TAATCAACTGGATAAACTCAGGGCGGGTATCTATCTGCTTGGCGTGGAGGATGCAACGGAGAAAAAACTATGGTGTGGAT ACGATTTATTTAAGACGCTAACATTAAATGAAATTGTCTATGTTTTCTTAAAAATAAAACACATAAAGAACTTAATTCTC GCGCGGCTGAGCTTATTATGGATAAATTAA
Upstream 100 bases:
>100_bases ATCGTCGGCAAGGGCGATACGGTGCCGGTGGCGGATAACGGCAGTAAAGCCGGGCGGGCGAAAAACCGTCGGGTGGAAAT TCTGGTAGTGGAGTGAATGA
Downstream 100 bases:
>100_bases TTAAATATTCATGTGATACAGGAGTTAAAAAATGAAACCTTTATTCTCAGTGCTAAAGTCTAATCATAATTCATCATCTT TTGAAAGTCCTGATTTTGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 249; Mature: 249
Protein sequence:
>249_residues MIKKSTYDVSHHSAICGVTGDYYRISATYHIKRSIRVFLIILCCLLPGGVFAGSLINAGLISPDNVNLSIRDFLGFYASD NLQEKDNTLMYVLGVADATEGKTWCGYGQVDSITINHTVLAWLDRYSVKKPDARASVLIEEALVKNFPCQGTEPSVKIAS RSSPVLSLTPDALNLSGNDFFKFWVSGNQLDKLRAGIYLLGVEDATEKKLWCGYDLFKTLTLNEIVYVFLKIKHIKNLIL ARLSLLWIN
Sequences:
>Translated_249_residues MIKKSTYDVSHHSAICGVTGDYYRISATYHIKRSIRVFLIILCCLLPGGVFAGSLINAGLISPDNVNLSIRDFLGFYASD NLQEKDNTLMYVLGVADATEGKTWCGYGQVDSITINHTVLAWLDRYSVKKPDARASVLIEEALVKNFPCQGTEPSVKIAS RSSPVLSLTPDALNLSGNDFFKFWVSGNQLDKLRAGIYLLGVEDATEKKLWCGYDLFKTLTLNEIVYVFLKIKHIKNLIL ARLSLLWIN >Mature_249_residues MIKKSTYDVSHHSAICGVTGDYYRISATYHIKRSIRVFLIILCCLLPGGVFAGSLINAGLISPDNVNLSIRDFLGFYASD NLQEKDNTLMYVLGVADATEGKTWCGYGQVDSITINHTVLAWLDRYSVKKPDARASVLIEEALVKNFPCQGTEPSVKIAS RSSPVLSLTPDALNLSGNDFFKFWVSGNQLDKLRAGIYLLGVEDATEKKLWCGYDLFKTLTLNEIVYVFLKIKHIKNLIL ARLSLLWIN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27747; Mature: 27747
Theoretical pI: Translated: 8.34; Mature: 8.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKKSTYDVSHHSAICGVTGDYYRISATYHIKRSIRVFLIILCCLLPGGVFAGSLINAGL CCCCCCCCCCCCCEEECCCCCEEEEEEEEEEHHHHHHHHHHHHHHCCCHHHHHHHHHCCC ISPDNVNLSIRDFLGFYASDNLQEKDNTLMYVLGVADATEGKTWCGYGQVDSITINHTVL CCCCCCCEEHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCEEECCCCCCEEEECHHHE AWLDRYSVKKPDARASVLIEEALVKNFPCQGTEPSVKIASRSSPVLSLTPDALNLSGNDF EHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCEEEECCCCEECCCCCE FKFWVSGNQLDKLRAGIYLLGVEDATEKKLWCGYDLFKTLTLNEIVYVFLKIKHIKNLIL EEEEECCCHHHHHHCCEEEEECCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHH ARLSLLWIN HHHHHEECC >Mature Secondary Structure MIKKSTYDVSHHSAICGVTGDYYRISATYHIKRSIRVFLIILCCLLPGGVFAGSLINAGL CCCCCCCCCCCCCEEECCCCCEEEEEEEEEEHHHHHHHHHHHHHHCCCHHHHHHHHHCCC ISPDNVNLSIRDFLGFYASDNLQEKDNTLMYVLGVADATEGKTWCGYGQVDSITINHTVL CCCCCCCEEHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCEEECCCCCCEEEECHHHE AWLDRYSVKKPDARASVLIEEALVKNFPCQGTEPSVKIASRSSPVLSLTPDALNLSGNDF EHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCEEEECCCCEECCCCCE FKFWVSGNQLDKLRAGIYLLGVEDATEKKLWCGYDLFKTLTLNEIVYVFLKIKHIKNLIL EEEEECCCHHHHHHCCEEEEECCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHH ARLSLLWIN HHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA