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The map label for this gene is ybfN [H]

Identifier: 29142595

GI number: 29142595

Start: 2253763

End: 2254095

Strand: Reverse

Name: ybfN [H]

Synonym: t2187

Alternate gene names: 29142595

Gene position: 2254095-2253763 (Counterclockwise)

Preceding gene: 29142596

Following gene: 29142586

Centisome position: 47.04

GC content: 51.95

Gene sequence:

>333_bases
ATGAAAAAAATTTTACTCATCGCCAGCATGACCGCCGGTTTGACGGCCTGCGCGTCATCACCCGCGCCGGAAGAAGATAG
TCGGCTGAAAGAGGCGTACAGCGCCTGTATCAATACCGCACAGGGCTCGCCTGAGAAGATAGAGGCCTGCCAAAGCGTAC
TGAATGTCCTTAAAAAAGAGCGCAAACATCAGCAATTTGCTAACGAAGAAAGCGTGCGGGTACTGGACTATCAGCAGTGC
ATTCAGGCGACGCGCACGGGTAACGATCAGGCGGTCAAGGCTGACTGCGATAAGGTCTGGCAGGAAATTCGCAGTCATAA
TAACGTGCAATAA

Upstream 100 bases:

>100_bases
GATGAACGTGACGTGAAATTTATCGTTATTGCGCCATTCACTATTTTCTGATGTCAGATGCGGCAGGCTGCCGGTCTGCC
GCGCTGTTGAGGAACGACCT

Downstream 100 bases:

>100_bases
AACCCTGCCTTGCCACCCACGGGCGAATGTTTTCCGCCTGTGGTTTTTTCAGGCTTTATTTTCTGCCGCGATATAGCCGC
GACTCAGACGTACAAACAGC

Product: lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 110; Mature: 110

Protein sequence:

>110_residues
MKKILLIASMTAGLTACASSPAPEEDSRLKEAYSACINTAQGSPEKIEACQSVLNVLKKERKHQQFANEESVRVLDYQQC
IQATRTGNDQAVKADCDKVWQEIRSHNNVQ

Sequences:

>Translated_110_residues
MKKILLIASMTAGLTACASSPAPEEDSRLKEAYSACINTAQGSPEKIEACQSVLNVLKKERKHQQFANEESVRVLDYQQC
IQATRTGNDQAVKADCDKVWQEIRSHNNVQ
>Mature_110_residues
MKKILLIASMTAGLTACASSPAPEEDSRLKEAYSACINTAQGSPEKIEACQSVLNVLKKERKHQQFANEESVRVLDYQQC
IQATRTGNDQAVKADCDKVWQEIRSHNNVQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786898, Length=107, Percent_Identity=84.1121495327103, Blast_Score=193, Evalue=2e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12209; Mature: 12209

Theoretical pI: Translated: 7.25; Mature: 7.25

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
4.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKILLIASMTAGLTACASSPAPEEDSRLKEAYSACINTAQGSPEKIEACQSVLNVLKKE
CCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
RKHQQFANEESVRVLDYQQCIQATRTGNDQAVKADCDKVWQEIRSHNNVQ
HHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKKILLIASMTAGLTACASSPAPEEDSRLKEAYSACINTAQGSPEKIEACQSVLNVLKKE
CCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
RKHQQFANEESVRVLDYQQCIQATRTGNDQAVKADCDKVWQEIRSHNNVQ
HHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]