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The map label for this gene is yliD [H]

Identifier: 29142459

GI number: 29142459

Start: 2095305

End: 2096216

Strand: Reverse

Name: yliD [H]

Synonym: t2038

Alternate gene names: 29142459

Gene position: 2096216-2095305 (Counterclockwise)

Preceding gene: 29142460

Following gene: 29142457

Centisome position: 43.74

GC content: 55.59

Gene sequence:

>912_bases
ATGCGATTATTTAACTGGCGCCGTCAGGCGATTTTACATGCTATGCCGGTGGTAAAACCCGACCAGATACGCACGCCGTG
GCGGGAGTTCTGGCGTCGTTTTCGCCGCCAGCATGTCGCGTTGGTCGCCGGGGGATTCGTACTGGCGTTAATTCTGGTGG
CGATTTTTGCCCGTTGGCTAACGCCCTACGATGCGGAAAACTATTTTGACTACGATAGCCTGAACAATGGCCCCTCTTTG
CAGCATTGGTTTGGCGTTGACTCGCTGGGAAGAGACATCTTTAGCCGGGTTCTCGTTGGCGCGCAGATCTCACTGGCGGC
GGGCGTGTTCGCGGTATTTATCGGCGCGATAATCGGCACGGTGTTGGGATTGCTGGCGGGATATTATGAAGGCTGGTGGG
ATCGTTTCATTATGCGCATTTGCGATGTGTTGTTCGCCTTCCCCGGCATTTTGCTGGCGATTGCCGTTGTGGCGGTGTTA
GGCAGCGGTATTGCTAATGTGATCGTTGCGGTGGCGATTTTCTCTATTCCGGCGTTTGCTCGTCTGGTGCGCGGAAATAC
CCTGGTCTTAAAACAGCAGACGTTTATTGAGTCTGCCCGCAGTATCGGCGCCAGCGACACGACGATTTTGTTTAGCCACA
TCTTGCCGGGAACGGTCTCGTCAATTGTGGTTTTCTTTACGATGCGTATCGGTACGTCAATTATTTCCGCGGCAAGCCTG
TCATTTCTCGGGTTAGGCGCGCAGCCGCCAACGCCGGAGTGGGGAGCGATGCTTAATGAAGCGCGGGCGGATATGGTCAT
CGCGCCGCACGTGGCGCTCTTCCCGGCGGTGGCGATTTTCCTGACTGTGCTGGCGTTTAATCTGTTAGGCGACGGGTTGC
GCGATGCGCTGGACCCGAAGATTAAGGGGTAA

Upstream 100 bases:

>100_bases
AGGCAGAAGTGCTGCTGTTTTCTCTGGAATTTATTCTTATCAACTTAGTGGTGGATGTCCTCTATGCCGCCATTAATCCG
GCTATCAGGTATAAGTAAGG

Downstream 100 bases:

>100_bases
GCCAGCCCGGTGGCGTTGACGCCTGGCGGGCCTGGAACCGGCTCGCCAGGTGGGGTAACACATTCGGCACCCGCGCCGGG
GGAAGTGGCGTTAAACCCGA

Product: ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 303; Mature: 303

Protein sequence:

>303_residues
MRLFNWRRQAILHAMPVVKPDQIRTPWREFWRRFRRQHVALVAGGFVLALILVAIFARWLTPYDAENYFDYDSLNNGPSL
QHWFGVDSLGRDIFSRVLVGAQISLAAGVFAVFIGAIIGTVLGLLAGYYEGWWDRFIMRICDVLFAFPGILLAIAVVAVL
GSGIANVIVAVAIFSIPAFARLVRGNTLVLKQQTFIESARSIGASDTTILFSHILPGTVSSIVVFFTMRIGTSIISAASL
SFLGLGAQPPTPEWGAMLNEARADMVIAPHVALFPAVAIFLTVLAFNLLGDGLRDALDPKIKG

Sequences:

>Translated_303_residues
MRLFNWRRQAILHAMPVVKPDQIRTPWREFWRRFRRQHVALVAGGFVLALILVAIFARWLTPYDAENYFDYDSLNNGPSL
QHWFGVDSLGRDIFSRVLVGAQISLAAGVFAVFIGAIIGTVLGLLAGYYEGWWDRFIMRICDVLFAFPGILLAIAVVAVL
GSGIANVIVAVAIFSIPAFARLVRGNTLVLKQQTFIESARSIGASDTTILFSHILPGTVSSIVVFFTMRIGTSIISAASL
SFLGLGAQPPTPEWGAMLNEARADMVIAPHVALFPAVAIFLTVLAFNLLGDGLRDALDPKIKG
>Mature_303_residues
MRLFNWRRQAILHAMPVVKPDQIRTPWREFWRRFRRQHVALVAGGFVLALILVAIFARWLTPYDAENYFDYDSLNNGPSL
QHWFGVDSLGRDIFSRVLVGAQISLAAGVFAVFIGAIIGTVLGLLAGYYEGWWDRFIMRICDVLFAFPGILLAIAVVAVL
GSGIANVIVAVAIFSIPAFARLVRGNTLVLKQQTFIESARSIGASDTTILFSHILPGTVSSIVVFFTMRIGTSIISAASL
SFLGLGAQPPTPEWGAMLNEARADMVIAPHVALFPAVAIFLTVLAFNLLGDGLRDALDPKIKG

Specific function: Part of the ABC transporter complex gsiABCD involved in glutathione import. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787054, Length=303, Percent_Identity=91.4191419141914, Blast_Score=561, Evalue=1e-161,
Organism=Escherichia coli, GI1787760, Length=257, Percent_Identity=42.8015564202335, Blast_Score=209, Evalue=1e-55,
Organism=Escherichia coli, GI1789964, Length=283, Percent_Identity=41.696113074205, Blast_Score=196, Evalue=2e-51,
Organism=Escherichia coli, GI1789889, Length=245, Percent_Identity=38.3673469387755, Blast_Score=175, Evalue=4e-45,
Organism=Escherichia coli, GI1787498, Length=280, Percent_Identity=39.2857142857143, Blast_Score=169, Evalue=3e-43,
Organism=Escherichia coli, GI1787549, Length=283, Percent_Identity=33.9222614840989, Blast_Score=146, Evalue=1e-36,
Organism=Escherichia coli, GI1788505, Length=225, Percent_Identity=30.2222222222222, Blast_Score=111, Evalue=5e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 33144; Mature: 33144

Theoretical pI: Translated: 10.06; Mature: 10.06

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLFNWRRQAILHAMPVVKPDQIRTPWREFWRRFRRQHVALVAGGFVLALILVAIFARWL
CCCHHHHHHHHHHHHCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
TPYDAENYFDYDSLNNGPSLQHWFGVDSLGRDIFSRVLVGAQISLAAGVFAVFIGAIIGT
CCCCCCCCCCCCCCCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLGLLAGYYEGWWDRFIMRICDVLFAFPGILLAIAVVAVLGSGIANVIVAVAIFSIPAFA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
RLVRGNTLVLKQQTFIESARSIGASDTTILFSHILPGTVSSIVVFFTMRIGTSIISAASL
HHHCCCEEEEHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
SFLGLGAQPPTPEWGAMLNEARADMVIAPHVALFPAVAIFLTVLAFNLLGDGLRDALDPK
HHHCCCCCCCCCHHHHHHHHHHCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
IKG
CCC
>Mature Secondary Structure
MRLFNWRRQAILHAMPVVKPDQIRTPWREFWRRFRRQHVALVAGGFVLALILVAIFARWL
CCCHHHHHHHHHHHHCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
TPYDAENYFDYDSLNNGPSLQHWFGVDSLGRDIFSRVLVGAQISLAAGVFAVFIGAIIGT
CCCCCCCCCCCCCCCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLGLLAGYYEGWWDRFIMRICDVLFAFPGILLAIAVVAVLGSGIANVIVAVAIFSIPAFA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
RLVRGNTLVLKQQTFIESARSIGASDTTILFSHILPGTVSSIVVFFTMRIGTSIISAASL
HHHCCCEEEEHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
SFLGLGAQPPTPEWGAMLNEARADMVIAPHVALFPAVAIFLTVLAFNLLGDGLRDALDPK
HHHCCCCCCCCCHHHHHHHHHHCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
IKG
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]